Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.9e-209 732.3 362 100.0
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.4e-196 688.7 362 94.2
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.9e-169 599.4 367 81.2
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.5e-169 597.8 367 82.0
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.8e-156 556.2 368 73.9
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 2.2e-138 496.1 369 68.0
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.2e-120 437.2 367 60.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 1.8e-119 433.3 368 61.4
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 6.8e-119 431.4 389 58.4
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 7.5e-118 427.9 374 60.7
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 3.7e-117 425.6 374 61.0
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 8.3e-117 424.5 368 60.3
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.4e-116 423.7 408 56.4
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.9e-116 423.3 397 56.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.2e-116 421.0 369 59.3
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.6e-115 420.2 365 58.9
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.7e-115 419.5 364 59.9
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.5e-115 419.1 371 59.8
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 4.6e-115 418.7 369 59.3
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.5e-113 412.9 369 58.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.3e-113 412.5 367 57.2
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.8e-112 409.5 363 58.7
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 6.2e-112 408.3 374 57.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.1e-111 407.5 369 58.8
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.1e-111 407.5 371 59.3
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.8e-111 406.8 373 56.6
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.2e-111 405.2 338 60.4
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 5.2e-111 405.2 368 58.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 6.8e-111 404.8 367 59.4
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.0e-110 403.3 362 58.3
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 3.4e-110 402.5 367 58.6
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 4.4e-110 402.1 366 57.4
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 4.9e-109 398.7 380 55.5
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 6.4e-109 398.3 312 65.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.1e-108 397.5 363 58.4
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.1e-108 397.5 365 58.9
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 3.2e-108 396.0 368 57.3
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 5.4e-108 395.2 369 58.0
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 9.2e-108 394.4 385 56.4
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 1.2e-107 394.0 367 56.7
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.0e-106 391.0 365 56.2
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 1.0e-106 391.0 381 55.6
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.3e-106 389.8 340 59.1
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.0e-106 389.4 365 56.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 3.9e-106 389.0 449 48.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.2e-104 384.0 369 55.6
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.6e-104 383.6 251 72.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 4.7e-104 382.1 291 64.6
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.8e-103 380.2 397 52.1
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 3.1e-103 379.4 445 48.1
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 1.2e-102 377.5 371 54.2
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.5e-102 377.1 420 50.7
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.5e-102 377.1 367 53.7
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.5e-102 377.1 344 57.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 8.4e-101 371.3 404 50.7
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 8.4e-101 371.3 296 62.2
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.4e-100 370.5 388 52.8
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 5.4e-100 368.6 365 52.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.2e-99 367.5 366 51.9
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 2.7e-99 366.3 354 56.2
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 7.8e-99 364.8 388 50.8
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 7.8e-99 364.8 388 50.8
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.0e-98 362.8 300 58.7
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.9e-98 362.5 251 67.7
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 5.1e-98 362.1 284 61.6
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.9e-97 360.1 393 50.4
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.5e-97 359.8 382 51.0
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 5.6e-97 358.6 271 64.9
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 7.3e-97 358.2 383 50.9
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.1e-96 356.7 373 51.5
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 8.1e-96 354.8 251 66.1
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 4.0e-95 352.4 303 57.4
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 5.2e-95 352.1 361 50.7
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 6.9e-95 351.7 379 50.4
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 6.9e-95 351.7 350 52.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 2.4e-92 343.2 266 60.9
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 5.4e-92 342.0 379 50.7
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.3e-90 337.4 390 48.7
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 3.1e-87 326.2 362 51.9
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.1e-84 317.8 253 58.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.2e-83 314.3 394 44.9
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 2.5e-81 306.6 422 44.5
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.0e-78 297.0 374 47.6
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 2.6e-78 296.6 261 54.0
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.4e-78 296.2 282 56.7
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.6e-75 285.8 285 55.8
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.6e-72 277.3 338 50.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.8e-72 276.6 173 75.1
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.4e-71 273.5 182 70.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.2e-69 266.9 288 46.5
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.4e-68 264.2 258 53.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 7.4e-65 251.9 281 51.2
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 2.8e-64 250.0 253 56.5
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 9.0e-63 245.0 289 49.1
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.4e-55 221.1 187 57.8
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 2.9e-53 213.4 368 37.8
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 7.2e-52 208.8 178 59.0
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 9.4e-52 208.4 152 63.8
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 2.1e-51 207.2 256 41.4
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.1e-51 207.2 355 40.0
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.0e-50 203.4 332 39.5
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 9.7e-49 198.4 176 53.4
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 2.3e-42 177.2 123 68.3
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 7.7e-38 162.2 91 84.6
AUR62008093 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.4e-31 140.6 153 56.2
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.1e-31 140.2 227 41.4
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 2.0e-30 137.5 304 32.6
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 1.7e-29 134.4 88 68.2
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 1.5e-28 131.3 120 55.8
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 4.0e-26 123.2 85 64.7
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 8.8e-26 122.1 357 30.0
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.3e-24 118.2 134 44.8
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.8e-23 114.4 85 55.3
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.2e-19 101.7 224 35.3
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 4.7e-19 99.8 145 42.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.2e-09 68.6 57 54.4
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 4.4e-09 66.6 47 59.6
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 3.2e-07 60.5 179 31.8
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 5.4e-07 59.7 136 33.1


User provided reference genes

Program Settings