Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008094 Chenopodium quinoa HOM05D000151 ORTHO05D011364 2.5e-300 1034.6 507 100.0
AUR62028672 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.1e-236 823.2 644 68.3
AUR62028673 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.2e-163 579.7 636 50.0
AUR62008095 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.8e-149 531.2 634 46.2
EL10Ac5g10608 Beta vulgaris HOM05D000151 ORTHO05D011364 5.8e-92 342.4 602 36.2
AUR62028674 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.3e-70 271.6 396 40.4
AUR62008096 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.2e-66 256.9 397 39.3
AUR62008101 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.9e-51 207.2 378 33.1
AUR62034700 Chenopodium quinoa HOM05D000151 ORTHO05D011364 8.8e-48 195.7 400 31.8
EL10Ac5g10638 Beta vulgaris HOM05D000151 ORTHO05D000074 6.3e-46 189.5 402 33.6
AUR62008102 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.2e-42 177.2 388 32.0
AUR62028679 Chenopodium quinoa HOM05D000151 ORTHO05D011364 4.7e-41 173.3 394 31.2
AUR62030461 Chenopodium quinoa HOM05D000151 ORTHO05D000074 9.8e-39 165.6 446 26.7
AUR62008108 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.7e-38 164.9 435 27.8
AUR62010452 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.2e-38 164.5 434 26.5
AUR62028684 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.8e-37 161.4 402 28.1
AUR62028682 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.6e-36 158.3 383 29.5
AUR62008130 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.9e-35 154.1 560 27.1
Hund02799 Selenicereus undatus HOM05D000151 ORTHO05D000074 1.2e-33 148.7 372 28.5
EL10Ac5g10637 Beta vulgaris HOM05D000151 ORTHO05D000074 8.0e-33 146.0 385 29.1
AUR62028680 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.8e-32 144.8 398 29.1
AUR62028713 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.8e-32 142.5 379 29.3
EL10Ac5g10605 Beta vulgaris HOM05D010377 ORTHO05D011364 1.5e-31 141.7 482 27.0
AUR62008081 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.5e-31 141.7 460 25.9
EL10Ac5g10604 Beta vulgaris HOM05D010377 ORTHO05D011364 2.6e-31 141.0 472 25.6
AUR62028712 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.8e-30 137.5 414 28.3
EL10Ac5g10611 Beta vulgaris HOM05D000151 ORTHO05D000074 1.8e-29 134.8 180 40.6
AUR62008099 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.1e-29 133.7 206 37.4
AUR62028663 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.2e-28 132.1 457 25.4
EL10Ac5g10602 Beta vulgaris HOM05D010377 ORTHO05D011364 3.5e-28 130.6 424 29.0
AUR62028661 Chenopodium quinoa HOM05D010377 ORTHO05D011364 3.3e-26 124.0 429 25.2
EL10Ac5g10601 Beta vulgaris HOM05D010377 ORTHO05D011364 2.1e-25 121.3 200 33.0
AUR62008131 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.4e-23 113.6 373 26.5
EL10Ac5g10609 Beta vulgaris HOM05D000151 ORTHO05D000074 9.8e-23 112.5 195 34.9
AUR62008105 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.4e-21 108.6 138 43.5
Sc09g0005460 Simmondsia chinensis HOM05D000151 ORTHO05D000074 3.2e-21 107.5 225 30.2
AUR62040512 Chenopodium quinoa HOM05D010377 ORTHO05D011364 5.4e-21 106.7 380 27.1
Hund19589 Selenicereus undatus HOM05D000151 ORTHO05D011364 5.4e-21 106.7 416 24.8
AUR62028664 Chenopodium quinoa HOM05D000151 ORTHO05D011364 2.7e-20 104.4 387 27.1
Ah.06g187160 Amaranthus hybridus HOM05D010377 ORTHO05D011364 3.5e-20 104.0 426 23.5
AUR62028671 Chenopodium quinoa HOM05D000151 ORTHO05D011364 3.5e-20 104.0 56 89.3
AUR62008098 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.8e-20 102.8 181 32.0
AUR62008107 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.8e-20 102.8 234 29.5
AUR62028676 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.8e-20 102.8 181 32.6
AUR62028659 Chenopodium quinoa HOM05D010377 ORTHO05D011364 3.9e-19 100.5 415 25.8
AUR62028675 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.9e-19 100.5 215 32.1
Ah.02g111100 Amaranthus hybridus HOM05D010377 ORTHO05D011364 5.0e-19 100.1 362 24.3
AUR62008090 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.6e-17 94.0 195 34.4
AUR62040513 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.0e-16 92.4 122 37.7
AUR62008080 Chenopodium quinoa HOM05D010377 ORTHO05D011364 2.3e-16 91.3 407 25.6
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-16 91.3 242 26.4
AUR62008100 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.0e-16 90.5 168 36.3
AUR62028677 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.0e-16 90.5 145 38.6
MD15G1237600 Malus domestica HOM05D000151 ORTHO05D000074 8.9e-16 89.4 181 32.0
PGR142G2333 Punica granatum HOM05D000151 ORTHO05D000074 4.4e-15 87.0 228 30.7
AUR62028666 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.5e-15 86.3 346 25.7
Manes.04G069000 Manihot esculenta HOM05D000151 ORTHO05D000074 1.3e-14 85.5 205 30.7
AUR62033879 Chenopodium quinoa HOM05D010377 ORTHO05D011364 4.9e-14 83.6 104 38.5
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 1.1e-13 82.4 166 28.9
AUR62008082 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.1e-13 82.4 154 31.8
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 1.1e-13 82.4 218 28.0
AUR62008086 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.4e-13 82.0 371 25.9
AUR62033878 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.4e-13 81.3 112 36.6
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 3.2e-13 80.9 180 28.9
Medtr6g018400 Medicago truncatula HOM05D000151 ORTHO05D000074 3.2e-13 80.9 184 29.9
FvH4_1g10321 Fragaria vesca HOM05D011470 ORTHO05D016309 5.4e-13 80.1 192 29.2
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 5.4e-13 80.1 233 28.8
vmacro20504 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 7.0e-13 79.7 160 36.2
Lj2g0007850 Lotus japonicus HOM05D000151 ORTHO05D000074 1.2e-12 79.0 193 30.1
RcHm_v2.0_Chr2g0098141 Rosa chinensis HOM05D000151 ORTHO05D000074 2.7e-12 77.8 132 36.4
CANSAT25G1224 Cannabis sativa HOM05D000151 ORTHO05D000074 3.5e-12 77.4 229 27.9
RcHm_v2.0_Chr2g0097161 Rosa chinensis HOM05D011470 ORTHO05D016309 3.5e-12 77.4 143 32.9
Haze_03686 Corylus avellana HOM05D000151 ORTHO05D000074 4.6e-12 77.0 188 30.3
Medtr3g091990 Medicago truncatula HOM05D000151 ORTHO05D000074 4.6e-12 77.0 193 32.1
FAN19G1393 Fragaria x ananassa HOM05D011470 ORTHO05D016309 6.0e-12 76.6 140 31.4
AUR62008104 Chenopodium quinoa HOM05D010377 ORTHO05D011364 7.8e-12 76.3 100 39.0
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.0e-11 75.9 209 28.2
AUR62003437 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.3e-11 75.5 176 30.7
AUR62008085 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.3e-11 75.5 95 35.8
AUR62036510 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.3e-11 75.5 151 29.8
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 1.3e-11 75.5 218 28.4
Gohir.D04G169400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.3e-11 75.5 211 28.4
AUR62029407 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.7e-11 75.1 192 30.2
FAN19G0228 Fragaria x ananassa HOM05D011470 ORTHO05D016309 1.7e-11 75.1 140 31.4
AT1G44080 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 2.3e-11 74.7 130 34.6
Gorai.012G157500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.3e-11 74.7 211 28.0
CARHR122800 Cardamine hirsuta HOM05D000151 ORTHO05D000074 3.0e-11 74.3 137 33.6
FvH4_1g10320 Fragaria vesca HOM05D011470 ORTHO05D016309 3.0e-11 74.3 140 31.4
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 3.9e-11 73.9 210 28.1
BcaC01g00515 Brassica carinata HOM05D000151 ORTHO05D000074 3.9e-11 73.9 149 32.2
BolC3t20339H Brassica oleracea HOM05D000151 ORTHO05D000074 3.9e-11 73.9 135 33.3
AUR62040515 Chenopodium quinoa HOM05D001917 ORTHO05D002790 3.9e-11 73.9 161 31.1
QL11p053223 Quercus lobata HOM05D000151 ORTHO05D000074 3.9e-11 73.9 187 28.9
AL5G14310 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 5.0e-11 73.6 128 32.0
Cfa006343 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.0e-11 73.6 195 29.2
Cfa007044 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.0e-11 73.6 191 29.3
CiPaw.07G005500 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.6e-11 73.2 211 26.1
FvH4_1g10850 Fragaria vesca HOM05D000151 ORTHO05D000074 6.6e-11 73.2 132 34.8
FAN19G1876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.6e-11 73.2 132 34.8
Gohir.D04G169200 Gossypium hirsutum HOM05D000151 ORTHO05D000074 6.6e-11 73.2 214 28.0
Medtr6g027100 Medicago truncatula HOM05D000151 ORTHO05D000074 6.6e-11 73.2 241 28.6
AUR62008087 Chenopodium quinoa HOM05D010377 ORTHO05D011364 8.6e-11 72.8 94 35.1
Gohir.A04G132412 Gossypium hirsutum HOM05D000151 ORTHO05D000074 8.6e-11 72.8 211 27.5
MD14G1159500 Malus domestica HOM05D000151 ORTHO05D000074 8.6e-11 72.8 182 30.2
C03p80850 Brassica napus HOM05D000151 ORTHO05D000074 1.1e-10 72.4 149 31.5
Medtr6g027040 Medicago truncatula HOM05D000151 ORTHO05D000074 1.5e-10 72.0 241 28.2
Rhsim05G0073700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.5e-10 72.0 197 27.9
Ca_14458_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 1.9e-10 71.6 217 26.7
FAN28G1149 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.3e-10 70.5 132 33.3
BraA08t34127Z Brassica rapa HOM05D000151 ORTHO05D000074 5.6e-10 70.1 130 33.1
Medtr6g018360 Medicago truncatula HOM05D000151 ORTHO05D000074 5.6e-10 70.1 193 29.0
Medtr3g029620 Medicago truncatula HOM05D000151 ORTHO05D000074 7.3e-10 69.7 198 28.3
Psat5g209160 Pisum sativum HOM05D000151 ORTHO05D000074 7.3e-10 69.7 164 32.3
Carub.0003s3095 Capsella rubella HOM05D000151 ORTHO05D000074 9.5e-10 69.3 207 28.0
CAN.G890.12 Capsicum annuum HOM05D000151 ORTHO05D000074 9.5e-10 69.3 179 29.6
QL11p052366 Quercus lobata HOM05D000151 ORTHO05D000074 9.5e-10 69.3 187 28.3
Sc11g0003610 Simmondsia chinensis HOM05D000151 ORTHO05D000074 9.5e-10 69.3 142 30.3
AT3G25750 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 1.2e-09 68.9 125 33.6
A08p21740 Brassica napus HOM05D000151 ORTHO05D000074 1.2e-09 68.9 130 32.3
Lj3g0027507 Lotus japonicus HOM05D000151 ORTHO05D000074 1.6e-09 68.6 212 26.4
RcHm_v2.0_Chr2g0098131 Rosa chinensis HOM05D000151 ORTHO05D000074 1.6e-09 68.6 294 23.5
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.1e-09 68.2 193 27.5
QL11p052376 Quercus lobata HOM05D000151 ORTHO05D000074 2.1e-09 68.2 186 26.9
QL11p053242 Quercus lobata HOM05D000151 ORTHO05D000074 2.1e-09 68.2 186 26.9
Manes.01G152400 Manihot esculenta HOM05D000151 ORTHO05D000074 2.8e-09 67.8 108 34.3
CiPaw.05G087200 Carya illinoinensis HOM05D000151 ORTHO05D000074 4.7e-09 67.0 209 27.8
Carub.0001s3497 Capsella rubella HOM05D000151 ORTHO05D000074 6.2e-09 66.6 125 31.2
Lj3g0003113 Lotus japonicus HOM05D000151 ORTHO05D000074 6.2e-09 66.6 167 29.9
Duzib132G0179 Durio zibethinus HOM05D000151 ORTHO05D000074 1.1e-08 65.9 209 26.8
Medtr6g018390 Medicago truncatula HOM05D000151 ORTHO05D000074 1.8e-08 65.1 182 28.6
Medtr6g018315 Medicago truncatula HOM05D000151 ORTHO05D000074 3.1e-08 64.3 183 27.3
Prupe.7G177400 Prunus persica HOM05D000151 ORTHO05D000074 3.1e-08 64.3 152 28.9
AUR62003438 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.2e-08 63.5 151 33.1
Medtr8g085760 Medicago truncatula HOM05D000151 ORTHO05D000074 5.2e-08 63.5 171 25.1
Prupe.7G177000 Prunus persica HOM05D000151 ORTHO05D000074 5.2e-08 63.5 158 29.7
Medtr3g029840 Medicago truncatula HOM05D000151 ORTHO05D000074 6.8e-08 63.2 127 34.6
Prupe.7G177100 Prunus persica HOM05D000151 ORTHO05D000074 6.8e-08 63.2 157 28.7
Sed0009321 Sechium edule HOM05D000151 ORTHO05D000074 1.2e-07 62.4 161 28.6
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.2e-07 62.4 218 26.1
AUR62010299 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.5e-07 62.0 140 31.4
Manes.08G042200 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-07 62.0 213 24.4
Medtr3g029800 Medicago truncatula HOM05D000151 ORTHO05D000074 1.5e-07 62.0 181 27.1
Lj2P487T53 Lonicera japonica HOM05D000151 ORTHO05D000074 2.0e-07 61.6 164 28.7
Medtr4g022880 Medicago truncatula HOM05D000151 ORTHO05D000074 2.6e-07 61.2 161 28.6
Prupe.7G177200 Prunus persica HOM05D000151 ORTHO05D000074 2.6e-07 61.2 155 29.7
AUR62039088 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.4e-07 60.8 140 30.7
Ciclev10017461m.g Citrus clementina HOM05D000151 ORTHO05D000074 3.4e-07 60.8 257 22.2
Medtr3g029900 Medicago truncatula HOM05D008161 ORTHO05D000074 3.4e-07 60.8 127 33.1
Hma1.2p1_0548F.1_g176680 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.4e-07 60.5 188 23.9
Sed0022869 Sechium edule HOM05D000151 ORTHO05D000074 5.8e-07 60.1 136 27.2
Medtr1g007260 Medicago truncatula HOM05D000151 ORTHO05D000074 7.5e-07 59.7 131 31.3
QL06p052388 Quercus lobata HOM05D000151 ORTHO05D000074 7.5e-07 59.7 139 29.5
Lj3g0018223 Lotus japonicus HOM05D000151 ORTHO05D000074 1.3e-06 58.9 204 25.5
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-06 58.5 195 24.1
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.7e-06 58.5 236 25.4
Eucgr.J02504 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.2e-06 58.2 143 28.0
Eucgr.L00944 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.9e-06 57.8 158 27.2
Medtr3g029950 Medicago truncatula HOM05D000151 ORTHO05D000074 2.9e-06 57.8 129 31.8
Eucgr.J02506 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.9e-06 57.0 143 28.0
CiPaw.08G070000 Carya illinoinensis HOM05D000151 ORTHO05D000074 6.4e-06 56.6 164 28.7
Eucgr.L00946 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.4e-06 56.6 203 23.2
Medtr3g029820 Medicago truncatula HOM05D000151 ORTHO05D000074 8.3e-06 56.2 168 26.8


User provided reference genes

Program Settings