Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008033 Chenopodium quinoa HOM05D000272 ORTHO05D044038 1.2e-65 253.1 127 100.0
AUR62003211 Chenopodium quinoa HOM05D000272 ORTHO05D044038 1.7e-56 222.6 130 88.5
Haze_15149 Corylus avellana HOM05D000272 ORTHO05D000164 1.6e-14 83.2 119 45.4
Potri.005G129500 Populus trichocarpa HOM05D000272 ORTHO05D000164 6.1e-14 81.3 150 42.0
Lj4A134T60 Lonicera japonica HOM05D000272 ORTHO05D000164 3.0e-13 79.0 117 47.9
Manes.12G096500 Manihot esculenta HOM05D000272 ORTHO05D000164 3.0e-13 79.0 118 43.2
Sabra05G0105000 Salix brachista HOM05D000272 ORTHO05D000164 5.1e-13 78.2 129 43.4
Manes.13G134500 Manihot esculenta HOM05D000272 ORTHO05D000164 6.7e-13 77.8 143 41.3
CiPaw.01G030600 Carya illinoinensis HOM05D000272 ORTHO05D000164 8.8e-13 77.4 141 44.0
Potri.007G032700 Populus trichocarpa HOM05D000272 ORTHO05D000164 3.3e-12 75.5 126 40.5
Hund16571 Selenicereus undatus HOM05D000272 ORTHO05D000164 3.3e-12 75.5 118 49.2
Oeu043837.2 Olea europaea HOM05D000272 ORTHO05D000164 5.7e-12 74.7 134 41.0
GSVIVG01019043001 Vitis vinifera HOM05D000272 ORTHO05D000164 5.7e-12 74.7 126 45.2
CiPaw.02G014200 Carya illinoinensis HOM05D000272 ORTHO05D000164 9.7e-12 73.9 155 41.3
Sabra07G0028600 Salix brachista HOM05D000272 ORTHO05D000164 9.7e-12 73.9 151 38.4
Lj7A13T42 Lonicera japonica HOM05D000272 ORTHO05D000164 1.7e-11 73.2 133 41.4
Cpa.g.sc15.126 Carica papaya HOM05D000272 ORTHO05D000164 2.2e-11 72.8 132 42.4
TAR376G0831 Trochodendron aralioides HOM05D000272 ORTHO05D000164 2.2e-11 72.8 106 45.3
Lalb_Chr09g0322751 Lupinus albus HOM05D000272 ORTHO05D000164 2.8e-11 72.4 122 41.0
Atru.chr3.490 Acer truncatum HOM05D000272 ORTHO05D000164 3.7e-11 72.0 120 47.5
Gohir.D03G017900 Gossypium hirsutum HOM05D000272 ORTHO05D000164 4.8e-11 71.6 117 39.3
Gorai.003G018100 Gossypium raimondii HOM05D000272 ORTHO05D000164 4.8e-11 71.6 117 39.3
COL.COLO4_22159 Corchorus olitorius HOM05D000272 ORTHO05D000164 6.3e-11 71.2 65 56.9
Dinv26788 Davidia involucrata HOM05D000272 ORTHO05D000164 6.3e-11 71.2 105 46.7
Oeu032905.1 Olea europaea HOM05D000272 ORTHO05D000164 6.3e-11 71.2 134 40.3
QL06p044514 Quercus lobata HOM05D000272 ORTHO05D000164 8.2e-11 70.9 65 55.4
Thecc.01G043900 Theobroma cacao HOM05D000272 ORTHO05D000164 1.1e-10 70.5 65 55.4
Sc03g0001050 Simmondsia chinensis HOM05D000272 ORTHO05D000164 1.8e-10 69.7 107 47.7
Duzib147G1460 Durio zibethinus HOM05D000272 ORTHO05D000164 2.4e-10 69.3 75 50.7
Lj4g0018259 Lotus japonicus HOM05D000272 ORTHO05D000164 2.4e-10 69.3 114 43.0
Duzib264G1110 Durio zibethinus HOM05D000272 ORTHO05D000164 3.1e-10 68.9 41 75.6
Lalb_Chr16g0388531 Lupinus albus HOM05D000272 ORTHO05D000164 3.1e-10 68.9 143 39.9
CSS0027889 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 5.3e-10 68.2 138 38.4
Lalb_Chr05g0213031 Lupinus albus HOM05D000272 ORTHO05D000164 5.3e-10 68.2 119 40.3
Gohir.A02G162533 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.9e-10 67.8 117 39.3
Migut.H00514 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.2e-09 67.0 95 44.2
Gohir.D11G193800 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.2e-09 67.0 114 39.5
Dinv39936 Davidia involucrata HOM05D000272 ORTHO05D000164 2.0e-09 66.2 117 41.0
Lj2g0003874 Lotus japonicus HOM05D000272 ORTHO05D000164 2.0e-09 66.2 143 39.2
TAR381G1140 Trochodendron aralioides HOM05D000272 ORTHO05D000164 2.0e-09 66.2 139 41.0
PSO541G5604 Papaver somniferum HOM05D000272 ORTHO05D000164 2.6e-09 65.9 64 54.7
RcHm_v2.0_Chr2g0102991 Rosa chinensis HOM05D000272 ORTHO05D000164 2.6e-09 65.9 130 40.8
MBI16_g10975_MAGBIO Magnolia biondii HOM05D000272 ORTHO05D000164 3.4e-09 65.5 115 43.5
VMungo0251G1749 Vigna mungo HOM05D000272 ORTHO05D000164 3.4e-09 65.5 116 43.1
Aqoxy6G00998 Aquilegia oxysepala HOM05D000272 ORTHO05D000164 4.5e-09 65.1 139 39.6
Lsat_1_v5_gn_4_176301 Lactuca sativa HOM05D000272 ORTHO05D000164 4.5e-09 65.1 114 41.2
Nn1g05122 Nelumbo nucifera HOM05D000272 ORTHO05D000164 4.5e-09 65.1 144 37.5
PSO675G0248 Papaver somniferum HOM05D000272 ORTHO05D000164 4.5e-09 65.1 64 54.7
Phvul.003G250500 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 4.5e-09 65.1 116 44.0
ClCG02G012970 Citrullus lanatus HOM05D000272 ORTHO05D000164 5.9e-09 64.7 47 66.0
HanXRQChr15g0473021 Helianthus annuus HOM05D000272 ORTHO05D000164 7.7e-09 64.3 110 39.1
Gohir.A11G187300 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.0e-08 63.9 114 38.6
Gorai.008G070800 Gossypium raimondii HOM05D000272 ORTHO05D000164 1.0e-08 63.9 45 66.7
MD02G1156800 Malus domestica HOM05D000272 ORTHO05D000164 1.0e-08 63.9 124 39.5
Nn5g29475 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.0e-08 63.9 40 75.0
A01p02050 Brassica napus HOM05D000272 ORTHO05D000164 1.3e-08 63.5 82 52.4
BraA01t00194Z Brassica rapa HOM05D000272 ORTHO05D000164 1.3e-08 63.5 82 52.4
Glyma.01G179900 Glycine max HOM05D000272 ORTHO05D000164 1.3e-08 63.5 136 41.2
TAR628G0701 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.3e-08 63.5 99 40.4
Gorai.007G207200 Gossypium raimondii HOM05D000272 ORTHO05D000164 2.2e-08 62.8 111 38.7
Actinidia12098 Actinidia chinensis HOM05D000272 ORTHO05D000164 2.9e-08 62.4 56 62.5
Actinidia36536 Actinidia chinensis HOM05D000272 ORTHO05D000164 2.9e-08 62.4 39 76.9
Ca_24817_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 2.9e-08 62.4 61 50.8
Gohir.D12G067400 Gossypium hirsutum HOM05D000272 ORTHO05D000164 2.9e-08 62.4 45 66.7
TWI73G1113 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.9e-08 62.4 132 36.4
Actinidia19151 Actinidia chinensis HOM05D000272 ORTHO05D000164 5.0e-08 61.6 67 53.7
Sed0005045 Sechium edule HOM05D000272 ORTHO05D000164 5.0e-08 61.6 60 55.0
Cfa004250 Carpinus fangiana HOM05D000272 ORTHO05D000164 6.5e-08 61.2 112 41.1
Ciclev10024897m.g Citrus clementina HOM05D000272 ORTHO05D000164 6.5e-08 61.2 41 65.9
CsaV3_2G017060 Cucumis sativus L. HOM05D000272 ORTHO05D000164 6.5e-08 61.2 47 61.7
BcaNung03523 Brassica carinata HOM05D000272 ORTHO05D000164 8.5e-08 60.8 110 46.4
C01p02230 Brassica napus HOM05D000272 ORTHO05D000164 8.5e-08 60.8 110 46.4
Glyma.02G060002 Glycine max HOM05D000272 ORTHO05D000164 8.5e-08 60.8 104 43.3
Glyma.16G142800 Glycine max HOM05D000272 ORTHO05D000164 8.5e-08 60.8 107 42.1
HanXRQChr11g0327301 Helianthus annuus HOM05D000272 ORTHO05D000164 8.5e-08 60.8 111 43.2
Actinidia30994 Actinidia chinensis HOM05D000272 ORTHO05D000164 1.1e-07 60.5 113 41.6
BolC1t00215H Brassica oleracea HOM05D000272 ORTHO05D000164 2.5e-07 59.3 110 45.5
Carub.0007s0345 Capsella rubella HOM05D000272 ORTHO05D000164 2.5e-07 59.3 80 47.5
Nitab4.5_0000483g0010 Nicotiana tabacum HOM05D000272 ORTHO05D000164 2.5e-07 59.3 91 44.0
SalBow1G8352 Salvia bowleyana HOM05D000272 ORTHO05D000164 2.5e-07 59.3 117 37.6
TWI09G0905 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 2.5e-07 59.3 115 37.4
Ca_22241_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 3.2e-07 58.9 63 54.0
Cc07_g05280 Coffea canephora HOM05D000272 ORTHO05D000164 3.2e-07 58.9 39 74.4
DCAR_010957 Daucus carota HOM05D000272 ORTHO05D000164 3.2e-07 58.9 137 41.6
Medtr5g018860 Medicago truncatula HOM05D000272 ORTHO05D000164 3.2e-07 58.9 106 34.0
SGA_v2.0_scaffold15G07179 Striga asiatica HOM05D000272 ORTHO05D000164 3.2e-07 58.9 40 77.5
VMungo1215G2826 Vigna mungo HOM05D000272 ORTHO05D000164 3.2e-07 58.9 146 36.3
Glyma.11G062300 Glycine max HOM05D000272 ORTHO05D000164 4.2e-07 58.5 39 66.7
Rhsim08G0110400 Rhododendron simsii HOM05D000272 ORTHO05D000164 4.2e-07 58.5 100 38.0
vmacro17874 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 5.5e-07 58.2 44 70.5
MSTRG.2928 Avicennia marina HOM05D000272 ORTHO05D000164 7.2e-07 57.8 133 38.3
BcaNung03521 Brassica carinata HOM05D000272 ORTHO05D000164 7.2e-07 57.8 108 44.4
AL4G13780 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 9.4e-07 57.4 37 73.0
AL7G14110 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 9.4e-07 57.4 128 39.1
AT2G23760 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 9.4e-07 57.4 37 73.0
MELO3C020878.2 Cucumis melo HOM05D000272 ORTHO05D000164 9.4e-07 57.4 105 40.0
HanXRQChr09g0265121 Helianthus annuus HOM05D000272 ORTHO05D000164 1.2e-06 57.0 106 38.7
Peaxi162Scf00535g00042 Petunia axillaris HOM05D000272 ORTHO05D000164 1.2e-06 57.0 88 46.6
Phvul.002G024800 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 1.2e-06 57.0 146 36.3
THA.LOC104819815 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 1.2e-06 57.0 89 46.1
TPR.G29852 Trifolium pratense HOM05D000272 ORTHO05D000164 1.2e-06 57.0 43 60.5
CARHR114590 Cardamine hirsuta HOM05D000272 ORTHO05D000164 1.6e-06 56.6 65 50.8
ECA246G3116 Erigeron canadensis HOM05D000272 ORTHO05D000164 1.6e-06 56.6 113 39.8
Nitab4.5_0004932g0010 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.6e-06 56.6 91 42.9
FAN26G2663 Fragaria x ananassa HOM05D000272 ORTHO05D000164 2.1e-06 56.2 140 36.4
Psat4g090560 Pisum sativum HOM05D000272 ORTHO05D000164 2.1e-06 56.2 63 52.4
Prupe.7G146900 Prunus persica HOM05D000272 ORTHO05D000164 2.1e-06 56.2 71 49.3
Lsat_1_v5_gn_3_93460 Lactuca sativa HOM05D000272 ORTHO05D000164 2.7e-06 55.8 101 39.6
Solyc02g089940.4 Solanum lycopersicum HOM05D000272 ORTHO05D000164 2.7e-06 55.8 90 43.3
Eucgr.I02488 Eucalyptus grandis HOM05D000272 ORTHO05D000164 3.6e-06 55.5 44 65.9
GSVIVG01009633001 Vitis vinifera HOM05D000272 ORTHO05D000164 3.6e-06 55.5 58 55.2
THA.LOC104807560 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 4.7e-06 55.1 53 52.8
Thhalv10024509m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 7.9e-06 54.3 128 39.8


User provided reference genes

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