Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.4e-98 361.3 183 100.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.0e-91 338.6 187 92.5
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 4.7e-60 235.0 182 69.8
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.1e-59 233.8 188 68.6
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 7.5e-58 227.6 185 68.1
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 5.1e-46 188.3 187 56.1
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 5.1e-46 188.3 157 62.4
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 8.7e-46 187.6 172 58.1
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.1e-45 187.2 123 75.6
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.1e-45 187.2 189 59.3
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.5e-45 186.8 164 61.6
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 3.3e-45 185.7 180 59.4
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 4.3e-45 185.3 160 62.5
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 4.3e-45 185.3 175 57.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 5.6e-45 184.9 183 57.4
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 5.6e-45 184.9 151 60.9
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 7.3e-45 184.5 183 57.4
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 7.3e-45 184.5 175 59.4
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 7.3e-45 184.5 198 56.6
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 7.3e-45 184.5 192 54.7
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.2e-44 183.7 121 73.6
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.2e-44 183.7 128 71.1
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 2.1e-44 183.0 174 57.5
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 2.1e-44 183.0 156 60.3
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 3.6e-44 182.2 136 68.4
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 3.6e-44 182.2 172 59.3
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 8.1e-44 181.0 173 57.8
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 8.1e-44 181.0 135 65.9
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 8.1e-44 181.0 171 56.1
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.1e-43 180.6 166 56.0
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 1.1e-43 180.6 184 56.5
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.4e-43 180.3 124 71.8
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.4e-43 180.3 191 52.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 1.8e-43 179.9 177 55.4
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.4e-43 179.5 128 68.8
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 2.4e-43 179.5 183 55.2
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 2.4e-43 179.5 188 55.9
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 3.1e-43 179.1 168 60.1
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 3.1e-43 179.1 137 65.0
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 4.0e-43 178.7 131 68.7
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 5.2e-43 178.3 200 53.0
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 6.9e-43 177.9 123 71.5
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 6.9e-43 177.9 119 71.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.5e-42 176.8 151 60.3
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.5e-42 176.8 188 55.9
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.0e-42 176.4 182 56.0
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.0e-42 176.4 191 51.3
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.0e-42 176.4 191 51.3
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 2.0e-42 176.4 177 54.8
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 2.0e-42 176.4 134 65.7
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.6e-42 176.0 152 61.2
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.4e-42 175.6 191 51.3
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.4e-42 175.6 163 59.5
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.4e-42 175.3 166 56.6
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.4e-42 175.3 166 56.6
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 4.4e-42 175.3 186 53.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 4.4e-42 175.3 135 65.9
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 4.4e-42 175.3 185 55.7
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 9.9e-42 174.1 180 53.3
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.9e-42 174.1 121 70.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 1.7e-41 173.3 144 64.6
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 1.7e-41 173.3 200 51.5
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 2.9e-41 172.6 124 70.2
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.8e-41 172.2 160 55.0
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 3.8e-41 172.2 121 69.4
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 3.8e-41 172.2 133 63.9
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 4.9e-41 171.8 134 65.7
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 4.9e-41 171.8 143 62.2
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 4.9e-41 171.8 120 70.0
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 1.1e-40 170.6 144 63.2
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 1.4e-40 170.2 148 60.8
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 1.9e-40 169.9 119 70.6
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 2.4e-40 169.5 132 62.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 4.2e-40 168.7 150 59.3
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 7.1e-40 167.9 144 61.8
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 7.1e-40 167.9 183 53.6
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.2e-39 167.2 134 65.7
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.2e-39 167.2 127 68.5
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.6e-39 166.8 104 75.0
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 3.5e-39 165.6 170 54.7
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 4.6e-39 165.2 131 61.1
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 6.0e-39 164.9 145 62.8
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 6.0e-39 164.9 145 62.8
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 6.0e-39 164.9 145 62.8
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 6.0e-39 164.9 145 62.8
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 6.0e-39 164.9 145 62.8
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 6.0e-39 164.9 127 67.7
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 6.0e-39 164.9 166 54.8
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 7.8e-39 164.5 147 60.5
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.3e-38 163.7 139 58.3
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 1.7e-38 163.3 166 56.0
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 2.3e-38 162.9 172 54.1
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 2.3e-38 162.9 119 68.1
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.3e-38 162.9 150 57.3
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.9e-38 162.2 121 66.1
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 5.1e-38 161.8 135 59.3
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.1e-36 156.4 136 57.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.4e-34 149.1 116 64.7
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 4.5e-34 148.7 126 59.5
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.5e-29 132.9 96 67.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.4e-27 127.1 140 53.6
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.4e-27 127.1 140 53.6
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.4e-27 127.1 140 53.6
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 1.1e-24 117.5 119 46.2
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 2.1e-23 113.2 132 43.9
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.9e-22 109.0 108 58.3
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 3.9e-22 109.0 80 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 5.6e-21 105.1 105 49.5
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 7.4e-21 104.8 118 55.1
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.4e-19 100.5 120 50.0
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 3.4e-18 95.9 114 41.2
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 2.2e-17 93.2 70 70.0
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 8.2e-12 74.7 46 69.6
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 4.6e-07 58.9 138 34.1
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 8.8e-06 54.7 41 56.1


User provided reference genes

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