Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007710 Chenopodium quinoa HOM05D002741 ORTHO05D002982 3.6e-122 441.8 256 100.0
AUR62020804 Chenopodium quinoa HOM05D000012 ORTHO05D001652 3.5e-29 132.9 113 68.1
AUR62000697 Chenopodium quinoa HOM05D000306 ORTHO05D018266 1.1e-11 74.7 113 42.5
AUR62012525 Chenopodium quinoa HOM05D000013 ORTHO05D000011 4.3e-11 72.8 80 48.8
AUR62030891 Chenopodium quinoa HOM05D002741 ORTHO05D002982 6.3e-10 68.9 38 86.8
AUR62027048 Chenopodium quinoa HOM05D002741 ORTHO05D002982 8.2e-10 68.6 38 86.8
AUR62001485 Chenopodium quinoa HOM05D000013 ORTHO05D003407 5.3e-09 65.9 80 45.0
Ah.01g024400 Amaranthus hybridus HOM05D002741 ORTHO05D002982 9.1e-09 65.1 38 81.6
EL10Ac9g22159 Beta vulgaris HOM05D002741 ORTHO05D002982 9.1e-09 65.1 38 84.2
AUR62027049 Chenopodium quinoa HOM05D002741 ORTHO05D002982 1.5e-08 64.3 38 78.9
AUR62030892 Chenopodium quinoa HOM05D002741 ORTHO05D002982 1.5e-08 64.3 38 78.9
DCAR_009275 Daucus carota HOM05D002741 ORTHO05D002982 3.4e-08 63.2 38 78.9
Hund06495 Selenicereus undatus HOM05D002741 ORTHO05D002982 7.7e-08 62.0 38 78.9
AUR62010612 Chenopodium quinoa HOM05D000551 ORTHO05D001750 6.5e-07 58.9 66 43.9
HanXRQChr11g0326341 Helianthus annuus HOM05D002741 ORTHO05D002982 6.5e-07 58.9 38 73.7
Nitab4.5_0000903g0070 Nicotiana tabacum HOM05D002741 ORTHO05D002982 6.5e-07 58.9 38 73.7
Nitab4.5_0000999g0020 Nicotiana tabacum HOM05D002741 ORTHO05D002982 6.5e-07 58.9 38 73.7
Hund00411 Selenicereus undatus HOM05D002741 ORTHO05D002982 8.5e-07 58.5 38 73.7
AUR62041538 Chenopodium quinoa HOM05D001289 ORTHO05D006592 1.1e-06 58.2 78 44.9
Hund06496 Selenicereus undatus HOM05D002741 ORTHO05D002982 1.4e-06 57.8 38 73.7
MSTRG.1591 Avicennia marina HOM05D002741 ORTHO05D002982 1.9e-06 57.4 38 71.1
CARHR261040 Cardamine hirsuta HOM05D002741 ORTHO05D002982 1.9e-06 57.4 38 71.1
AUR62022410 Chenopodium quinoa HOM05D000388 ORTHO05D000473 1.9e-06 57.4 58 50.0
Solyc11g042420.2 Solanum lycopersicum HOM05D002741 ORTHO05D002982 1.9e-06 57.4 38 71.1
Lsat_1_v5_gn_4_135380 Lactuca sativa HOM05D002741 ORTHO05D002982 2.5e-06 57.0 38 71.1
Peaxi162Scf00011g01641 Petunia axillaris HOM05D002741 ORTHO05D002982 2.5e-06 57.0 38 71.1
MBI03_g28422_MAGBIO Magnolia biondii HOM05D002741 ORTHO05D002982 3.2e-06 56.6 38 71.1
Sp6g07410 Schrenkiella parvula HOM05D002741 ORTHO05D002982 3.2e-06 56.6 38 68.4
Hund00412 Selenicereus undatus HOM05D002741 ORTHO05D002982 3.2e-06 56.6 38 71.1
SGA_v2.0_scaffold118G32600 Striga asiatica HOM05D002741 ORTHO05D002982 3.2e-06 56.6 38 71.1
Zm00001eb349110 Zea mays HOM05D002741 ORTHO05D002982 4.2e-06 56.2 38 71.1
MELO3C016630.2 Cucumis melo HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
CsaV3_5G011290 Cucumis sativus L. HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
Nitab4.5_0002240g0030 Nicotiana tabacum HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
Peaxi162Scf00078g00421 Petunia axillaris HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
SalBow7G3847 Salvia bowleyana HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
SEGI_19862 Sequoiadendron giganteum HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
SEGI_32362 Sequoiadendron giganteum HOM05D002741 ORTHO05D002982 5.5e-06 55.8 38 68.4
ATR1089G107 Amborella trichopoda HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
MSTRG.27875 Avicennia marina HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
Nn5g27276 Nelumbo nucifera HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
Oeu023201.1 Olea europaea HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
PGSC0003DMG400001003 Solanum tuberosum HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
TWI59G0921 Tripterygium wilfordii HOM05D002741 ORTHO05D002982 7.2e-06 55.5 38 68.4
Zm00001eb288340 Zea mays HOM05D002741 ORTHO05D002982 7.2e-06 55.5 39 66.7
AL1G36380 Arabidopsis lyrata HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Eucgr.F02978 Eucalyptus grandis HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
MD08G1213100 Malus domestica HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
MD15G1395600 Malus domestica HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Nitab4.5_0003120g0030 Nicotiana tabacum HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Oeu010216.1 Olea europaea HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Oeu020529.1 Olea europaea HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Os05g0420600 Oryza sativa ssp. japonica HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Thecc.08G176800 Theobroma cacao HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4
Zm00001eb145520 Zea mays HOM05D002741 ORTHO05D002982 9.4e-06 55.1 38 68.4


User provided reference genes

Program Settings