Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 6.5e-114 414.1 210 100.0
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 3.5e-107 391.7 210 94.8
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.8e-93 345.5 210 84.8
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 4.6e-83 311.6 211 79.6
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 1.3e-74 283.5 212 69.3
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 3.0e-74 282.3 212 70.8
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 9.5e-73 277.3 210 69.5
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 2.8e-72 275.8 213 67.1
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 3.6e-72 275.4 209 68.9
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 6.2e-72 274.6 213 66.2
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 3.1e-71 272.3 214 67.8
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 5.2e-71 271.6 211 70.1
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 6.8e-71 271.2 206 67.0
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 1.2e-70 270.4 218 67.9
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 9.9e-70 267.3 212 66.5
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 9.9e-70 267.3 208 67.8
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.3e-69 266.9 210 66.7
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.7e-69 266.5 209 65.1
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.1e-68 263.8 204 67.2
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.4e-68 263.5 210 64.3
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 1.9e-68 263.1 204 67.6
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.4e-68 262.7 195 68.7
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 3.2e-68 262.3 204 67.2
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 3.2e-68 262.3 204 67.2
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 3.2e-68 262.3 202 67.3
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 4.1e-68 261.9 210 64.3
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 7.1e-68 261.2 205 67.8
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 7.1e-68 261.2 209 64.1
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 9.2e-68 260.8 212 67.0
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 9.2e-68 260.8 204 65.7
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 1.2e-67 260.4 218 64.7
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.2e-67 260.4 205 65.9
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.2e-67 260.4 204 66.7
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 1.2e-67 260.4 217 63.6
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.1e-67 259.6 205 65.4
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 2.1e-67 259.6 210 64.8
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 3.5e-67 258.8 210 64.3
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 3.5e-67 258.8 209 63.6
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 6.0e-67 258.1 211 64.0
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 6.0e-67 258.1 204 66.7
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 7.8e-67 257.7 203 65.5
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.0e-66 257.3 205 64.9
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.3e-66 256.9 209 64.1
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.3e-66 256.9 209 63.6
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 5.1e-66 255.0 203 63.5
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 8.6e-66 254.2 206 66.0
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.5e-65 253.4 190 66.8
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 1.5e-65 253.4 206 67.0
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.9e-65 253.1 204 64.2
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 4.3e-65 251.9 207 65.2
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 5.6e-65 251.5 211 64.0
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 5.6e-65 251.5 209 63.2
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 7.3e-65 251.1 183 69.9
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 7.3e-65 251.1 211 65.9
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 9.6e-65 250.8 147 78.9
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 9.6e-65 250.8 183 69.9
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 9.6e-65 250.8 211 61.6
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 1.2e-64 250.4 212 62.3
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 1.6e-64 250.0 211 60.7
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 1.6e-64 250.0 211 60.7
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 2.8e-64 249.2 182 69.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 2.8e-64 249.2 211 62.1
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 2.8e-64 249.2 206 65.0
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 6.2e-64 248.1 212 61.3
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 8.1e-64 247.7 210 61.9
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.4e-63 246.9 192 68.2
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.4e-63 246.9 212 61.3
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 2.4e-63 246.1 209 61.2
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 2.4e-63 246.1 212 60.8
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 2.4e-63 246.1 201 65.2
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 3.1e-63 245.7 212 60.8
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 3.1e-63 245.7 219 62.1
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 3.1e-63 245.7 194 67.0
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 4.0e-63 245.4 212 60.8
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 5.2e-63 245.0 208 62.0
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 5.2e-63 245.0 200 64.5
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 8.9e-63 244.2 205 64.4
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 2.0e-62 243.0 179 66.5
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 3.4e-62 242.3 209 58.4
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.9e-62 240.7 138 79.7
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.3e-61 240.4 209 59.3
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 4.9e-61 238.4 210 61.0
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 6.4e-61 238.0 199 61.8
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 1.1e-60 237.3 175 66.3
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 1.4e-60 236.9 181 68.5
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 4.2e-60 235.3 150 72.7
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.2e-59 233.8 137 82.5
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.6e-59 233.4 182 63.7
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 2.3e-58 229.6 209 58.9
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.3e-57 225.7 181 65.7
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 5.6e-57 224.9 221 57.5
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 1.3e-56 223.8 128 79.7
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.2e-56 221.5 205 60.5
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 9.9e-54 214.2 173 63.6
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.1e-52 210.7 205 56.6
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 3.2e-52 209.1 156 64.1
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 4.2e-52 208.8 163 64.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 3.5e-43 179.1 137 60.6
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 4.6e-43 178.7 119 71.4
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 1.0e-42 177.6 131 64.1
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.3e-40 170.6 146 58.2
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 4.0e-39 165.6 151 58.9
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 5.3e-39 165.2 131 61.1
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 2.9e-37 159.5 129 58.9
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.4e-36 157.1 86 81.4
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.5e-33 147.1 185 50.3
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.8e-31 140.2 136 53.7
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 4.6e-27 125.6 208 41.3
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 2.5e-25 119.8 72 76.4
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 9.7e-25 117.9 123 56.1
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 2.1e-11 73.6 115 42.6


User provided reference genes

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