Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 8.0e-82 307.0 149 100.0
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.6e-26 123.2 162 49.4
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.6e-21 106.7 74 64.9
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 6.9e-17 91.3 77 59.7
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 5.8e-16 88.2 96 49.0
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.3e-15 87.0 126 42.1
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 1.7e-15 86.7 66 65.2
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 3.8e-15 85.5 93 48.4
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 4.9e-15 85.1 70 55.7
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 4.9e-15 85.1 78 53.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 6.4e-15 84.7 87 49.4
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.1e-14 84.0 110 43.6
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 1.1e-14 84.0 105 44.8
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.4e-14 82.8 106 48.1
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 3.2e-14 82.4 87 44.8
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 4.2e-14 82.0 120 39.2
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 7.1e-14 81.3 55 63.6
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 9.3e-14 80.9 61 62.3
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 9.3e-14 80.9 73 60.3
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 1.2e-13 80.5 56 64.3
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 1.2e-13 80.5 62 61.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.1e-13 79.7 54 61.1
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.1e-13 79.7 54 61.1
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.7e-13 79.3 94 43.6
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.7e-13 79.3 76 57.9
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 2.7e-13 79.3 91 46.2
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 3.5e-13 79.0 42 73.8
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.5e-13 79.0 54 61.1
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 4.6e-13 78.6 69 52.2
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 7.9e-13 77.8 73 57.5
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 7.9e-13 77.8 73 57.5
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 1.0e-12 77.4 73 53.4
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.0e-12 77.4 83 47.0
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 1.0e-12 77.4 103 42.7
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.0e-12 77.4 91 46.2
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 1.0e-12 77.4 84 46.4
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 1.3e-12 77.0 102 47.1
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.3e-12 77.0 72 55.6
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.3e-12 77.0 72 55.6
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 1.8e-12 76.6 105 42.9
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 1.8e-12 76.6 102 43.1
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 2.3e-12 76.3 91 45.1
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 2.3e-12 76.3 69 53.6
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 3.9e-12 75.5 116 36.2
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 3.9e-12 75.5 58 56.9
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.9e-12 75.5 65 56.9
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 5.1e-12 75.1 136 33.8
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 5.1e-12 75.1 48 64.6
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 5.1e-12 75.1 81 45.7
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 6.7e-12 74.7 38 84.2
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 6.7e-12 74.7 64 54.7
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 6.7e-12 74.7 72 55.6
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 6.7e-12 74.7 49 69.4
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.1e-11 73.9 37 81.1
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 1.1e-11 73.9 103 39.8
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.1e-11 73.9 40 72.5
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 1.5e-11 73.6 47 66.0
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 1.9e-11 73.2 37 81.1
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 1.9e-11 73.2 60 60.0
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 1.9e-11 73.2 60 60.0
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.9e-11 73.2 39 74.4
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 2.5e-11 72.8 62 56.5
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 3.3e-11 72.4 33 87.9
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 3.3e-11 72.4 55 60.0
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.3e-11 72.0 94 44.7
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 7.4e-11 71.2 40 70.0
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 7.4e-11 71.2 119 39.5
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 9.6e-11 70.9 39 69.2
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.3e-10 70.5 31 90.3
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 1.6e-10 70.1 59 57.6
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.1e-10 69.7 142 33.1
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.1e-10 69.7 95 40.0
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 2.8e-10 69.3 31 87.1
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 2.8e-10 69.3 31 87.1
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.8e-10 69.3 119 38.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.8e-10 68.6 55 58.2
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 4.8e-10 68.6 119 38.7
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 6.2e-10 68.2 72 48.6
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 6.2e-10 68.2 33 78.8
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 8.1e-10 67.8 34 76.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 8.1e-10 67.8 66 51.5
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.1e-09 67.4 33 81.8
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.4e-09 67.0 66 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 1.8e-09 66.6 73 50.7
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.8e-09 66.6 44 63.6
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.8e-09 66.6 32 81.2
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.8e-09 66.6 40 67.5
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 3.1e-09 65.9 102 41.2
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 4.0e-09 65.5 59 54.2
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 4.0e-09 65.5 98 37.8
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 1.5e-08 63.5 32 78.1
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 1.5e-08 63.5 30 83.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 2.0e-08 63.2 93 37.6
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 4.5e-08 62.0 30 73.3
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 4.5e-08 62.0 44 59.1
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 7.6e-08 61.2 133 36.8
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 9.9e-08 60.8 78 42.3
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.3e-07 60.5 66 47.0
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.7e-07 60.1 73 49.3
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 2.2e-07 59.7 98 39.8
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 3.8e-07 58.9 60 55.0
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 1.9e-06 56.6 69 44.9
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 9.3e-06 54.3 69 39.1


User provided reference genes

Program Settings