Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 0.0e+00 1138.6 553 100.0
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 2.2e-310 1068.1 553 93.9
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 1.8e-232 809.3 556 73.4
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 8.5e-230 800.4 555 71.4
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 6.8e-195 684.5 552 63.2
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 6.2e-156 555.1 549 53.0
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 1.6e-140 503.8 563 48.0
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 6.1e-135 485.3 573 47.1
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 1.7e-132 477.2 559 46.9
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 1.7e-132 477.2 600 45.2
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 3.1e-131 473.0 584 45.5
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 2.0e-130 470.3 558 46.4
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 6.5e-129 465.3 585 45.3
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 1.6e-127 460.7 566 43.8
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 6.1e-127 458.8 570 43.5
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.1e-127 458.8 582 43.8
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 3.0e-126 456.4 560 45.0
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 3.9e-126 456.1 583 45.6
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 5.1e-126 455.7 581 44.8
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 6.7e-126 455.3 560 44.6
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 6.7e-126 455.3 582 43.1
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 1.1e-125 454.5 602 43.9
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 5.7e-125 452.2 615 42.8
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 7.4e-125 451.8 571 43.3
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 9.7e-125 451.4 557 44.3
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 8.2e-124 448.4 577 43.3
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 8.2e-124 448.4 572 44.8
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.4e-123 446.8 571 42.6
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 4.1e-123 446.0 611 42.6
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 7.0e-123 445.3 575 42.8
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 9.1e-123 444.9 567 44.1
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 9.1e-123 444.9 568 43.0
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 1.2e-122 444.5 578 42.7
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 1.5e-122 444.1 561 44.2
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 1.5e-122 444.1 568 43.1
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 3.5e-122 443.0 568 42.4
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 7.7e-122 441.8 571 42.0
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 8.5e-121 438.3 601 42.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.1e-120 438.0 592 42.4
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 1.9e-120 437.2 562 42.0
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 7.2e-120 435.3 551 45.0
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 1.1e-117 427.9 562 43.2
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 2.0e-117 427.2 611 39.9
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 2.6e-117 426.8 558 44.1
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 4.4e-117 426.0 574 42.3
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 5.7e-117 425.6 581 42.2
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 2.8e-116 423.3 524 45.0
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 4.8e-116 422.5 553 43.6
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 3.1e-115 419.9 582 42.4
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 1.2e-114 417.9 570 40.9
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 4.5e-114 416.0 558 42.5
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 2.9e-113 413.3 570 40.5
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 5.0e-113 412.5 566 42.4
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 6.5e-113 412.1 557 42.2
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.5e-112 411.0 570 41.4
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 1.9e-112 410.6 557 40.2
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 9.4e-112 408.3 585 41.2
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 1.2e-111 407.9 570 42.8
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 2.1e-111 407.1 585 40.3
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 3.0e-110 403.3 567 40.0
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 6.8e-110 402.1 575 40.3
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 1.2e-109 401.4 551 42.1
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.6e-109 400.2 579 40.8
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 2.8e-108 396.7 579 41.5
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 3.7e-108 396.4 521 42.4
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 8.3e-108 395.2 571 41.3
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 3.1e-107 393.3 554 40.1
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 3.1e-107 393.3 554 40.1
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 7.0e-107 392.1 600 39.5
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 9.1e-107 391.7 555 41.1
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 1.2e-106 391.3 561 41.7
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 1.6e-106 391.0 579 40.2
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 2.0e-106 390.6 574 39.7
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 3.5e-106 389.8 561 41.7
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 5.9e-106 389.0 563 40.3
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 2.9e-105 386.7 554 41.5
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 5.5e-104 382.5 552 40.2
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 1.4e-102 377.9 553 40.0
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.8e-102 377.5 554 40.4
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 3.0e-102 376.7 568 40.3
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 8.8e-102 375.2 555 40.4
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 1.7e-100 370.9 563 40.5
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 1.2e-98 364.8 548 39.6
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 4.0e-94 349.7 442 44.6
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.7e-92 344.4 579 35.9
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 6.6e-89 332.4 551 37.4
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 4.3e-88 329.7 594 35.0
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 4.7e-87 326.2 550 36.7
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 1.7e-84 317.8 405 44.2
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 2.4e-83 313.9 567 34.2
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.2e-82 311.6 402 42.3
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 4.6e-82 309.7 414 41.5
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.3e-81 308.1 435 42.3
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 2.8e-79 300.4 384 43.2
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.9e-75 287.7 419 41.1
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 1.3e-73 281.6 343 48.1
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.9e-72 277.7 533 34.1
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 4.7e-71 273.1 446 39.0
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.6e-58 231.5 225 52.0
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 3.5e-50 203.8 632 26.9
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 6.0e-50 203.0 555 28.6
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.1e-48 198.7 213 46.0
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.1e-47 194.5 484 29.1
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 2.6e-45 187.6 186 51.1
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.1e-43 182.2 603 27.0
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 3.1e-38 164.1 170 51.2
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 4.2e-35 153.7 128 57.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 9.3e-35 152.5 143 54.5
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 8.5e-28 129.4 388 27.3
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 1.3e-23 115.5 159 43.4
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.8e-23 114.4 441 23.8
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 4.8e-23 113.6 138 42.0
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 6.9e-22 109.8 102 55.9
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.1e-14 85.9 85 44.7
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 9.4e-11 72.8 71 50.7
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 1.4e-09 68.9 74 39.2
TAR629G1149 Trochodendron aralioides HOM05D006531 ORTHO05D007905 3.9e-09 67.4 62 48.4
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.3e-07 62.4 75 46.7
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 2.2e-07 61.6 42 71.4
CBR_g8866 Chara braunii HOM05D006531 ORTHO05D007905 4.1e-06 57.4 91 30.8


User provided reference genes

Program Settings