Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.5e-71 271.9 132 100.0
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 2.5e-47 192.2 92 96.7
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.1e-37 160.2 90 78.9
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 1.1e-37 160.2 90 78.9
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 5.3e-37 157.9 89 76.4
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 5.3e-37 157.9 89 76.4
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 4.5e-36 154.8 94 73.4
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 5.9e-36 154.5 89 76.4
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 7.6e-36 154.1 90 75.6
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 1.3e-35 153.3 89 77.5
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 2.2e-35 152.5 87 77.0
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 2.9e-35 152.1 89 76.4
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 2.9e-35 152.1 89 76.4
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 5.0e-35 151.4 89 76.4
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 6.5e-35 151.0 89 75.3
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 8.5e-35 150.6 88 76.1
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 1.4e-34 149.8 89 76.4
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 2.5e-34 149.1 89 76.4
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 3.2e-34 148.7 89 74.2
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 4.2e-34 148.3 124 58.1
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 4.2e-34 148.3 89 73.0
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 5.5e-34 147.9 89 71.9
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 5.5e-34 147.9 89 71.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 7.2e-34 147.5 89 73.0
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.2e-33 146.7 89 73.0
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 1.2e-33 146.7 89 74.2
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 1.2e-33 146.7 89 70.8
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 1.6e-33 146.4 89 73.0
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 2.1e-33 146.0 89 73.0
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 3.6e-33 145.2 92 70.7
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 3.6e-33 145.2 89 73.0
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 3.6e-33 145.2 89 69.7
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 4.6e-33 144.8 89 74.2
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 6.1e-33 144.4 89 71.9
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 6.1e-33 144.4 89 70.8
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 7.9e-33 144.1 89 69.7
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.9e-33 144.1 89 69.7
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 7.9e-33 144.1 89 70.8
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 1.0e-32 143.7 89 70.8
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 1.0e-32 143.7 89 70.8
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.0e-32 143.7 89 69.7
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 1.3e-32 143.3 89 71.9
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.3e-32 143.3 89 74.2
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.3e-32 143.3 89 70.8
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 1.3e-32 143.3 89 70.8
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 1.8e-32 142.9 89 71.9
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 1.8e-32 142.9 89 71.9
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 1.8e-32 142.9 90 71.1
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.8e-32 142.9 89 73.0
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 1.8e-32 142.9 89 73.0
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 1.8e-32 142.9 89 69.7
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 3.0e-32 142.1 89 74.2
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 3.9e-32 141.7 89 71.9
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.9e-32 141.7 89 70.8
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.9e-32 141.7 89 74.2
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 6.7e-32 141.0 89 68.5
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.7e-32 141.0 89 67.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 8.7e-32 140.6 89 73.0
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.1e-31 140.2 94 67.0
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 1.1e-31 140.2 99 63.6
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 1.5e-31 139.8 89 70.8
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 1.5e-31 139.8 89 71.9
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 1.9e-31 139.4 90 70.0
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 1.9e-31 139.4 89 73.0
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.9e-31 139.4 89 68.5
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 7.4e-31 137.5 90 73.3
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 7.4e-31 137.5 90 73.3
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 7.4e-31 137.5 90 73.3
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 7.4e-31 137.5 89 65.2
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.8e-30 135.6 89 69.7
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 6.3e-30 134.4 90 72.2
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 6.3e-30 134.4 89 70.8
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.1e-29 133.7 113 61.1
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 5.3e-29 131.3 73 79.5
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 6.9e-29 131.0 90 62.2
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 1.3e-27 126.7 89 62.9
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 2.2e-27 125.9 92 66.3
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 2.2e-27 125.9 92 66.3
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 4.2e-26 121.7 117 53.8
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 5.5e-26 121.3 83 65.1
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 7.2e-26 120.9 94 64.9
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 7.2e-26 120.9 73 72.6
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 7.2e-26 120.9 73 72.6
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.2e-25 120.2 112 51.8
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 7.9e-25 117.5 87 62.1
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 1.0e-24 117.1 75 70.7
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.4e-24 116.7 88 59.1
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 1.8e-24 116.3 95 51.6
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 2.3e-24 115.9 91 52.7
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-23 113.2 88 60.2
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.5e-23 113.2 98 56.1
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 4.4e-23 111.7 113 50.4
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 4.4e-23 111.7 74 71.6
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 2.2e-22 109.4 107 54.2
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 1.8e-21 106.3 74 67.6
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 4.1e-21 105.1 74 63.5
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 4.1e-21 105.1 66 72.7
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 6.5e-19 97.8 70 61.4
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 2.5e-18 95.9 64 68.8
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 1.2e-17 93.6 89 56.2
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 4.7e-17 91.7 65 61.5
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 8.0e-17 90.9 89 53.9
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.9e-16 88.6 48 83.3
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 1.1e-15 87.0 99 43.4
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 2.0e-15 86.3 51 70.6
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 4.4e-15 85.1 97 44.3
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 1.3e-14 83.6 68 54.4
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 2.4e-13 79.3 48 72.9
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 4.1e-13 78.6 112 41.1
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 2.6e-12 75.9 45 77.8
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 2.2e-11 72.8 53 58.5
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.6e-09 65.5 52 57.7
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 6.1e-09 64.7 90 41.1
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 2.6e-07 59.3 108 38.9
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.2e-06 56.2 36 83.3


User provided reference genes

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