Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.3e-123 446.4 237 100.0
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.2e-117 424.9 237 95.4
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 9.1e-88 327.4 241 74.7
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.8e-86 322.0 240 72.5
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 2.8e-81 305.8 237 69.6
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 8.2e-81 304.3 238 69.7
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 4.5e-79 298.5 246 69.1
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 5.9e-79 298.1 242 66.9
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 3.8e-78 295.4 241 65.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 5.0e-78 295.0 245 66.5
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 8.5e-78 294.3 241 66.8
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.1e-77 293.9 225 71.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.1e-77 293.9 225 71.6
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.5e-77 293.5 238 66.0
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.5e-77 293.5 243 67.1
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.9e-77 293.1 244 66.8
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.9e-77 293.1 238 65.5
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.5e-77 292.7 217 71.4
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 3.2e-77 292.4 243 65.4
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 3.2e-77 292.4 216 74.1
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 4.2e-77 292.0 239 64.9
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 7.2e-77 291.2 238 65.1
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 9.4e-77 290.8 238 65.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.2e-76 290.4 243 66.3
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.6e-76 290.0 238 64.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 2.1e-76 289.7 238 65.1
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.7e-76 289.3 238 65.1
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.7e-76 289.3 238 65.1
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 3.6e-76 288.9 241 64.7
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 8.0e-76 287.7 244 66.0
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.0e-75 287.3 217 70.5
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.0e-75 287.3 246 63.8
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.0e-75 287.3 238 64.7
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.0e-75 287.3 244 65.2
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.4e-75 287.0 246 63.8
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.4e-75 287.0 243 66.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.4e-75 287.0 242 66.5
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.4e-75 287.0 214 73.4
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.8e-75 286.6 218 69.7
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.8e-75 286.6 243 63.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 2.3e-75 286.2 241 66.4
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-75 286.2 241 67.2
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 2.3e-75 286.2 241 67.2
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.1e-74 283.9 211 73.9
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 4.4e-74 282.0 244 64.8
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 7.4e-74 281.2 208 72.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 9.7e-74 280.8 253 62.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 9.7e-74 280.8 244 65.6
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.3e-73 280.4 241 66.8
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.7e-73 280.0 250 64.8
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.7e-73 280.0 226 67.7
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.8e-73 279.3 211 70.1
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 3.7e-73 278.9 242 64.0
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 4.8e-73 278.5 246 64.6
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 6.3e-73 278.1 211 69.2
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.4e-72 276.9 211 70.1
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.2e-71 273.9 216 65.3
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.5e-71 272.3 227 65.2
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 5.9e-71 271.6 231 61.9
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 7.7e-71 271.2 217 65.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.3e-70 270.4 205 70.2
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 2.2e-70 269.6 252 60.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.2e-70 269.6 226 64.2
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 2.9e-70 269.2 214 65.9
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.1e-69 267.3 207 69.1
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.9e-69 266.5 199 72.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 3.2e-69 265.8 226 64.2
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.2e-69 265.8 226 64.6
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 4.2e-69 265.4 245 58.0
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 7.2e-69 264.6 226 63.7
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.2e-68 263.8 208 65.4
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 2.1e-68 263.1 213 64.8
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.7e-68 262.7 197 70.6
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 3.6e-68 262.3 238 60.1
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 4.7e-68 261.9 246 60.2
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 8.0e-68 261.2 207 67.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.0e-67 260.8 208 66.3
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.4e-67 260.4 207 66.2
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 8.8e-67 257.7 217 61.3
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.5e-66 256.9 217 61.3
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 4.4e-66 255.4 211 64.5
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 4.4e-66 255.4 220 65.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 5.7e-66 255.0 214 63.6
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 9.7e-66 254.2 235 57.9
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.7e-65 253.4 241 60.2
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 8.3e-65 251.1 229 59.8
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.1e-64 250.8 220 62.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 7.7e-63 244.6 234 59.0
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.9e-61 240.0 234 58.1
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 4.2e-61 238.8 216 62.5
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 8.0e-60 234.6 240 56.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 5.2e-59 231.9 214 60.7
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 6.8e-59 231.5 168 72.0
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 3.7e-57 225.7 191 65.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 6.1e-52 208.4 202 56.4
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 4.4e-50 202.2 211 52.6
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.8e-50 201.1 148 70.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.2e-49 199.9 208 51.4
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 9.2e-48 194.5 209 51.2
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 5.2e-43 178.7 228 44.3
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 7.0e-40 168.3 114 75.4
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.3e-38 164.1 157 61.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.3e-38 163.3 221 46.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.4e-35 154.1 163 54.6
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.7e-30 137.1 205 42.0
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.3e-30 136.7 99 73.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 4.3e-29 132.5 132 54.5
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 9.6e-21 104.8 85 65.9
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 5.8e-18 95.5 190 34.7
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 3.3e-13 79.7 208 30.3
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 4.8e-12 75.9 60 65.0
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 2.9e-09 66.6 51 70.6
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 7.9e-07 58.5 46 69.6


User provided reference genes

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