Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.4e-159 567.8 592 100.0
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.1e-145 521.5 592 90.7
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 5.7e-97 359.8 265 68.3
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.3e-53 215.7 263 44.5
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.3e-53 215.7 263 44.5
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 9.9e-49 199.5 249 43.0
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 1.7e-48 198.7 240 43.8
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 9.2e-47 193.0 250 43.6
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 9.2e-47 193.0 262 42.0
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 1.2e-46 192.6 265 42.6
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 5.1e-45 187.2 212 43.4
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 3.6e-43 181.0 247 42.5
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 7.6e-41 173.3 203 40.9
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.1e-39 169.5 193 42.0
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 1.4e-39 169.1 254 37.4
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 1.6e-38 165.6 196 41.8
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 8.7e-37 159.8 266 37.2
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 1.9e-36 158.7 211 40.8
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 4.3e-36 157.5 241 38.6
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 5.3e-34 150.6 274 34.7
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 9.0e-34 149.8 257 35.4
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 1.5e-33 149.1 206 37.4
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 5.8e-33 147.1 208 38.9
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 7.6e-33 146.7 203 40.4
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 2.2e-32 145.2 161 44.1
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 1.4e-31 142.5 203 39.9
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 1.9e-31 142.1 199 37.7
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 3.2e-31 141.4 201 39.8
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 4.2e-31 141.0 199 37.2
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 7.1e-31 140.2 162 43.8
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 3.5e-30 137.9 213 36.2
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 6.0e-30 137.1 199 37.2
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 6.7e-29 133.7 206 35.9
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 4.3e-28 131.0 205 37.1
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 2.0e-25 122.1 157 40.1
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 5.5e-23 114.0 161 34.8
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 6.0e-22 110.5 147 39.5
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 2.3e-21 108.6 212 32.1
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 5.1e-21 107.5 211 33.6
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 2.5e-20 105.1 262 29.0
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 3.7e-19 101.3 258 29.1
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 1.8e-18 99.0 182 32.4
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 3.1e-18 98.2 205 31.7
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 9.0e-18 96.7 242 29.3
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 1.0e-16 93.2 164 33.5
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 1.9e-15 89.0 202 30.2
Lsat_1_v5_gn_5_112121 Lactuca sativa HOM05D008483 ORTHO05D010726 2.1e-11 75.5 79 48.1
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 5.3e-10 70.9 216 25.0
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 2.0e-09 68.9 172 28.5
CARHR144810 Cardamine hirsuta HOM05D007496 ORTHO05D009479 2.6e-09 68.6 74 43.2
AL5G11430 Arabidopsis lyrata HOM05D007496 ORTHO05D009479 7.6e-09 67.0 161 25.5
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 1.0e-08 66.6 152 30.3
AT2G02150 Arabidopsis thaliana HOM05D007496 ORTHO05D009479 5.0e-08 64.3 74 41.9
Thhalv10003688m.g Eutrema salsugineum HOM05D007496 ORTHO05D009479 5.0e-08 64.3 164 23.8
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 6.5e-08 63.9 62 40.3
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 6.5e-08 63.9 74 39.2
Actinidia38410 Actinidia chinensis HOM05D007496 ORTHO05D009479 1.9e-07 62.4 77 35.1
MD13G1010200 Malus domestica HOM05D007496 ORTHO05D009479 1.9e-07 62.4 77 36.4
MSTRG.22851 Avicennia marina HOM05D005764 ORTHO05D006600 4.2e-07 61.2 173 27.2
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 4.2e-07 61.2 74 37.8
Migut.L00784 Erythranthe guttata HOM05D007496 ORTHO05D009479 5.5e-07 60.8 123 30.1
Prupe.1G342600 Prunus persica HOM05D007496 ORTHO05D009479 5.5e-07 60.8 77 36.4
Carub.0005s0122 Capsella rubella HOM05D007496 ORTHO05D009479 7.2e-07 60.5 169 24.9
Rhsim09G0071100 Rhododendron simsii HOM05D007496 ORTHO05D009479 7.2e-07 60.5 77 35.1
Sp2g13565 Schrenkiella parvula HOM05D007496 ORTHO05D009479 7.2e-07 60.5 163 22.7
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 1.6e-06 59.3 111 29.7
BolC5t29723H Brassica oleracea HOM05D002890 ORTHO05D009847 2.7e-06 58.5 187 22.5
SalBow6G1669 Salvia bowleyana HOM05D007358 ORTHO05D009117 2.7e-06 58.5 138 23.2
QL03p041883 Quercus lobata HOM05D007496 ORTHO05D009479 3.6e-06 58.2 77 35.1
TWI74G1032 Tripterygium wilfordii HOM05D007291 ORTHO05D009038 4.6e-06 57.8 189 25.9
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 6.1e-06 57.4 77 32.5
PGR042G2810 Punica granatum HOM05D005764 ORTHO05D006600 7.9e-06 57.0 140 25.7
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 7.9e-06 57.0 125 28.8
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 7.9e-06 57.0 84 38.1


User provided reference genes

Program Settings