Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 1.8e-216 755.7 405 100.0
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.0e-207 725.7 447 88.8
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 3.6e-201 704.9 404 90.6
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 1.4e-192 676.4 405 90.4
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 8.8e-192 673.7 405 85.9
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 5.9e-188 661.0 405 84.4
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 5.9e-188 661.0 405 84.4
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.3e-187 659.8 405 84.4
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.7e-187 659.4 405 83.0
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 2.9e-187 658.7 405 83.7
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 1.9e-186 656.0 405 84.0
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 2.5e-186 655.6 405 84.4
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 7.2e-186 654.1 405 83.5
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 1.6e-185 652.9 405 83.5
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.1e-185 652.5 405 84.0
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.4e-184 649.8 404 84.2
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 2.3e-184 649.0 404 83.9
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 3.0e-184 648.7 404 82.2
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 4.0e-184 648.3 404 83.7
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 4.0e-184 648.3 404 83.7
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 5.2e-184 647.9 404 83.7
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 5.2e-184 647.9 404 83.2
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 5.2e-184 647.9 405 82.5
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 6.8e-184 647.5 404 83.4
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 6.8e-184 647.5 404 83.9
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 6.8e-184 647.5 405 82.5
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 1.2e-183 646.7 404 81.9
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 2.0e-183 646.0 404 83.7
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 2.6e-183 645.6 404 83.7
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 2.6e-183 645.6 404 83.7
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 3.4e-183 645.2 404 83.4
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 3.4e-183 645.2 405 83.5
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 5.7e-183 644.4 420 80.7
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 7.5e-183 644.0 405 81.5
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 9.8e-183 643.7 405 82.5
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 9.8e-183 643.7 404 83.2
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 9.8e-183 643.7 405 82.2
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 1.7e-182 642.9 405 82.5
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 2.2e-182 642.5 405 82.5
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 2.2e-182 642.5 405 83.2
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 2.8e-182 642.1 404 83.4
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 4.8e-182 641.3 403 82.4
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 8.3e-182 640.6 403 82.4
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 1.1e-181 640.2 403 81.9
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 1.8e-181 639.4 404 83.2
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 1.8e-181 639.4 405 82.2
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.8e-181 639.4 405 82.2
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 1.8e-181 639.4 405 82.0
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.8e-181 639.4 404 82.4
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 1.8e-181 639.4 405 81.7
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 4.1e-181 638.3 405 82.0
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 5.4e-181 637.9 405 81.7
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 2.7e-180 635.6 405 79.3
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 3.5e-180 635.2 405 81.0
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 3.5e-180 635.2 405 81.5
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 4.5e-180 634.8 405 79.8
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 1.3e-179 633.3 405 81.5
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.3e-179 633.3 404 81.9
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 1.7e-179 632.9 405 81.2
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 3.8e-179 631.7 402 82.6
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 1.1e-178 630.2 405 81.7
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 1.5e-178 629.8 389 83.8
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 1.5e-178 629.8 405 80.2
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 1.5e-178 629.8 404 81.4
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 2.5e-178 629.0 402 80.6
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.5e-178 629.0 404 80.9
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 3.2e-178 628.6 404 80.9
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 5.5e-178 627.9 404 80.7
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 7.2e-178 627.5 404 80.4
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 7.2e-178 627.5 405 80.2
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.2e-177 626.7 404 80.4
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 2.8e-177 625.5 404 80.2
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 3.6e-177 625.2 404 80.9
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 1.0e-176 623.6 406 79.3
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 1.4e-176 623.2 405 79.0
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 2.3e-176 622.5 404 79.5
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 2.3e-176 622.5 401 81.5
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 4.0e-176 621.7 404 81.2
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 5.2e-176 621.3 390 83.1
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 5.2e-176 621.3 390 83.1
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 5.2e-176 621.3 404 78.2
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 5.2e-176 621.3 404 80.2
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 5.2e-176 621.3 404 78.2
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 1.2e-175 620.2 459 73.4
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 2.6e-175 619.0 390 83.1
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 2.6e-175 619.0 404 79.0
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 3.4e-175 618.6 404 78.7
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 4.4e-175 618.2 405 80.5
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 5.7e-175 617.8 398 79.9
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.3e-174 616.7 404 81.7
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 2.8e-174 615.5 415 78.8
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.6e-172 609.8 404 77.2
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.0e-172 609.4 389 81.5
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 3.5e-172 608.6 405 77.5
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 7.8e-172 607.4 405 78.3
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 7.8e-172 607.4 404 77.2
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 2.9e-171 605.5 436 74.1
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 6.6e-171 604.4 405 78.3
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.1e-169 599.4 403 80.4
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 2.1e-169 599.4 403 77.7
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 1.0e-168 597.0 376 82.2
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 3.0e-168 595.5 404 77.0
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 8.9e-168 594.0 405 76.0
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 4.4e-167 591.7 405 76.0
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 7.5e-167 590.9 405 75.8
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 4.1e-165 585.1 403 76.7
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 7.0e-165 584.3 405 75.8
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 1.6e-164 583.2 404 75.7
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 9.5e-162 573.9 405 71.6
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 1.2e-159 567.0 405 74.6
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 2.0e-156 556.2 407 71.3
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 2.3e-155 552.7 405 75.3
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 9.9e-151 537.3 406 72.7
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 1.1e-146 523.9 404 67.3
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 1.1e-146 523.9 404 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.2e-137 493.8 404 62.9
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 3.4e-135 485.7 376 73.1
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 2.4e-133 479.6 404 60.4
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 1.3e-131 473.8 404 61.4
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.6e-119 433.0 354 63.3
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 1.4e-109 400.6 255 78.8
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 1.5e-106 390.6 230 88.7
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 2.5e-106 389.8 253 76.7
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 6.3e-97 358.6 406 49.3
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 8.2e-81 305.1 395 46.8
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 1.2e-74 284.6 405 42.5
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 9.1e-72 275.0 169 87.6
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.9e-69 267.3 177 74.6
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 5.5e-69 265.8 386 38.6
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.8e-67 260.8 156 90.4
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.2e-66 258.1 252 57.1
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 4.1e-64 249.6 395 36.2
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 1.6e-60 237.7 175 69.1
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.3e-57 228.0 352 38.1
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 2.0e-55 220.7 442 38.0
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 3.3e-53 213.4 162 69.1
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 4.9e-41 172.9 126 69.0
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 6.6e-38 162.5 225 44.4
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 9.9e-26 122.1 84 76.2
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.3e-25 121.7 89 68.5
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 8.4e-25 119.0 83 72.3
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 4.6e-23 113.2 89 67.4
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 4.6e-23 113.2 97 69.1
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 4.7e-20 103.2 408 24.5
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 3.6e-12 77.0 424 25.2
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 6.2e-12 76.3 221 29.4
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.4e-11 75.1 57 64.9
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 4.5e-10 70.1 67 64.2


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