Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 4.3e-245 850.9 434 100.0
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 2.6e-197 692.2 434 84.6
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 9.5e-152 540.8 419 64.0
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 6.2e-151 538.1 462 61.3
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 5.8e-149 531.6 430 60.7
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 9.9e-149 530.8 431 62.6
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 1.4e-147 526.9 409 64.1
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.1e-146 523.1 431 61.5
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.7e-146 522.7 427 61.1
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.7e-145 520.0 419 61.3
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 3.0e-145 519.2 427 60.0
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 3.9e-145 518.8 513 57.3
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 6.6e-145 518.1 399 64.2
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 6.6e-145 518.1 428 60.0
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 6.6e-145 518.1 427 59.5
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 1.5e-144 516.9 426 60.1
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 3.3e-144 515.8 427 61.1
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 3.3e-144 515.8 386 66.8
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 4.3e-144 515.4 428 60.0
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 5.6e-144 515.0 445 58.7
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 5.6e-144 515.0 427 60.7
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 7.3e-144 514.6 419 63.2
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.8e-143 512.7 419 62.8
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 2.8e-143 512.7 429 62.0
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 3.6e-143 512.3 419 60.9
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 4.8e-143 511.9 446 58.7
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 6.2e-143 511.5 419 61.1
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.4e-142 510.4 426 59.6
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.4e-142 510.4 419 62.8
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 2.4e-142 509.6 386 65.5
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.4e-142 509.6 420 61.9
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 9.0e-142 507.7 419 60.1
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.2e-141 507.3 419 60.1
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 1.2e-141 507.3 427 59.5
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.2e-141 507.3 427 59.5
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 1.5e-141 506.9 422 61.4
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.5e-141 506.9 392 63.3
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 1.5e-141 506.9 382 63.1
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.5e-141 506.9 420 60.2
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 2.0e-141 506.5 419 60.4
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 3.4e-141 505.8 385 64.7
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.4e-141 505.8 427 59.3
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 7.6e-141 504.6 445 58.4
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 1.3e-140 503.8 429 60.1
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 1.3e-140 503.8 451 57.9
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 2.2e-140 503.1 427 59.7
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 2.9e-140 502.7 419 59.7
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 4.9e-140 501.9 427 59.5
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 1.1e-139 500.7 426 59.6
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 1.4e-139 500.4 430 59.5
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.9e-139 500.0 419 59.7
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 1.9e-139 500.0 382 62.6
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 3.2e-139 499.2 427 59.3
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 4.2e-139 498.8 391 64.7
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 5.4e-139 498.4 425 58.8
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 5.4e-139 498.4 427 58.8
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 7.1e-139 498.0 430 59.1
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 1.2e-138 497.3 419 60.1
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 1.2e-138 497.3 431 58.9
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.6e-138 496.9 419 60.1
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.6e-138 496.9 419 60.1
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.6e-138 496.9 443 57.3
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 2.7e-138 496.1 420 59.8
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 3.5e-138 495.7 421 59.1
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 6.0e-138 495.0 419 58.9
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 6.0e-138 495.0 419 58.9
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 6.0e-138 495.0 419 58.9
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 1.0e-137 494.2 428 58.4
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.0e-137 494.2 394 61.7
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 1.3e-137 493.8 419 59.9
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.3e-137 493.0 373 64.9
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 3.9e-137 492.3 421 58.4
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 3.9e-137 492.3 427 57.8
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 3.9e-137 492.3 376 62.2
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.3e-136 489.2 426 58.7
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 4.3e-136 488.8 419 58.7
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 4.3e-136 488.8 416 60.3
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 7.3e-136 488.0 419 58.7
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 1.6e-135 486.9 415 59.5
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 1.6e-135 486.9 389 61.7
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 4.8e-135 485.3 353 67.4
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 8.1e-135 484.6 474 53.0
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 1.4e-134 483.8 419 58.2
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 1.4e-134 483.8 419 58.2
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 1.4e-134 483.8 411 59.4
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 1.8e-134 483.4 411 59.4
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 4.0e-134 482.3 371 65.5
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 4.0e-134 482.3 393 60.1
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 6.9e-134 481.5 380 62.1
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 6.9e-134 481.5 423 57.9
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 9.0e-134 481.1 383 62.4
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 2.0e-133 479.9 427 56.7
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 2.0e-133 479.9 427 56.9
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 2.0e-133 479.9 432 57.2
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 1.7e-132 476.9 385 60.8
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 2.2e-132 476.5 427 57.4
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 2.9e-132 476.1 421 61.5
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 8.4e-132 474.6 389 59.1
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 1.4e-131 473.8 385 60.5
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 2.4e-131 473.0 386 59.3
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 5.4e-131 471.9 353 64.3
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 3.0e-129 466.1 391 59.1
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 3.3e-128 462.6 509 49.5
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.1e-126 456.1 399 59.9
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 3.1e-126 456.1 399 59.9
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 3.1e-126 456.1 430 55.3
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 5.3e-126 455.3 389 58.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 5.3e-126 455.3 550 47.1
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 6.4e-124 448.4 349 64.5
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 3.2e-123 446.0 419 56.6
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 3.5e-122 442.6 341 62.5
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.0e-121 439.5 379 56.7
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 3.0e-121 439.5 419 55.4
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 7.4e-120 434.9 387 53.2
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 1.6e-119 433.7 419 53.7
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 4.5e-117 425.6 315 67.3
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 7.6e-117 424.9 381 56.7
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.0e-116 424.5 381 56.7
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.0e-116 424.5 325 63.7
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 1.3e-116 424.1 458 52.4
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 1.6e-114 417.2 325 62.2
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 6.7e-113 411.8 375 53.6
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 3.3e-112 409.5 386 49.5
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 2.2e-111 406.8 429 51.0
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.8e-108 396.0 384 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 3.6e-106 389.4 391 51.2
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 2.2e-103 380.2 383 53.0
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.6e-101 373.2 243 72.4
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 3.0e-97 359.8 435 45.1
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 3.0e-97 359.8 305 59.3
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 4.8e-95 352.4 239 69.9
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 1.1e-94 351.3 268 66.0
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 3.9e-89 332.8 265 64.5
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 1.1e-86 324.7 208 72.1
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 1.0e-76 291.6 398 40.5
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 4.4e-64 249.6 354 39.5
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 1.6e-61 241.1 244 54.9
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 2.3e-57 227.3 374 38.5
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 9.5e-43 178.7 190 51.6
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 2.8e-34 150.6 98 67.3
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 5.2e-33 146.4 85 78.8
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 7.1e-30 136.0 105 59.0
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 3.6e-18 97.1 108 49.1
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 6.2e-18 96.3 99 50.5
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 2.0e-16 91.3 91 48.4
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 3.4e-16 90.5 95 50.5
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 6.4e-15 86.3 62 66.1
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 6.4e-15 86.3 62 66.1
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 6.4e-15 86.3 62 66.1
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.9e-14 84.7 62 64.5
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 5.5e-14 83.2 60 65.0
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.9e-13 79.3 61 63.9
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 2.3e-12 77.8 54 70.4
arahy.Tifrunner.gnm1.ann1.18EICQ Arachis hypogaea HOM05D000755 ORTHO05D017477 3.8e-07 60.5 59 52.5
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 1.9e-06 58.2 32 75.0


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