Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.4e-173 612.1 314 100.0
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.9e-158 562.0 314 92.7
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 7.0e-96 354.8 299 66.6
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 2.3e-75 286.6 251 66.5
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 8.4e-73 278.1 318 54.4
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.8e-52 209.9 324 42.3
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 5.3e-51 205.7 318 41.8
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 6.9e-51 205.3 313 42.8
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 1.2e-50 204.5 327 44.6
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.1e-47 193.7 314 41.7
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.7e-47 193.4 314 41.7
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 6.0e-47 192.2 324 41.0
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.0e-46 191.4 324 41.7
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.8e-46 190.7 325 43.1
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.0e-46 189.9 324 41.4
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 3.0e-46 189.9 321 41.7
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 5.1e-46 189.1 324 40.7
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.5e-45 187.6 346 39.3
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.5e-45 187.6 319 41.1
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 1.9e-45 187.2 331 40.8
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 2.5e-45 186.8 323 40.6
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 3.7e-44 183.0 310 40.3
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.2e-42 177.9 332 40.7
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.4e-42 176.4 321 38.6
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 7.6e-42 175.3 318 40.9
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.0e-41 174.9 321 38.3
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 6.5e-41 172.2 344 38.1
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.2e-40 169.9 325 40.0
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 4.2e-40 169.5 324 39.8
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 5.5e-40 169.1 324 37.3
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 9.3e-40 168.3 323 39.3
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 3.5e-39 166.4 321 36.8
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 4.6e-39 166.0 232 45.7
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 7.9e-39 165.2 271 41.0
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 8.7e-38 161.8 347 39.2
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 4.3e-37 159.5 318 35.8
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 9.6e-37 158.3 350 37.4
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 2.8e-36 156.8 330 37.9
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.7e-36 156.4 317 35.6
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.1e-35 154.8 317 37.5
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 3.1e-35 153.3 245 42.9
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 4.1e-35 152.9 350 38.0
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 6.9e-35 152.1 312 39.1
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 9.0e-35 151.8 244 42.2
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 1.5e-34 151.0 329 37.4
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 2.0e-34 150.6 330 39.4
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.6e-34 150.2 327 37.3
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.6e-34 150.2 327 37.3
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 3.4e-34 149.8 338 35.2
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.4e-34 149.8 310 37.7
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 4.5e-34 149.4 318 35.2
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 7.6e-34 148.7 315 36.2
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 7.6e-34 148.7 266 40.6
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.7e-33 147.5 322 37.0
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.7e-33 147.5 316 36.4
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 5.0e-33 146.0 297 37.4
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 8.5e-33 145.2 333 39.0
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.4e-32 144.4 324 35.8
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 2.5e-32 143.7 325 35.1
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 2.7e-31 140.2 320 35.3
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 1.8e-30 137.5 317 36.3
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 3.3e-29 133.3 341 36.7
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 5.7e-29 132.5 320 34.4
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 2.2e-28 130.6 320 34.4
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 4.8e-28 129.4 328 34.1
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 8.2e-28 128.6 310 35.2
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.8e-27 127.5 312 32.4
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 9.0e-27 125.2 259 36.7
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 7.7e-26 122.1 357 32.5
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.0e-25 121.7 313 32.6
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.5e-25 118.6 309 32.7
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.1e-24 118.2 317 34.4
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 1.4e-24 117.9 349 35.0
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.9e-24 117.5 310 31.3
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 2.5e-24 117.1 307 33.6
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 7.2e-24 115.5 322 32.3
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 3.9e-22 109.8 324 33.3
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 8.8e-22 108.6 319 33.9
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 2.6e-21 107.1 241 38.6
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 4.8e-20 102.8 350 30.9
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 6.3e-20 102.4 317 31.2
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 6.9e-19 99.0 364 31.0
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 1.2e-18 98.2 342 32.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 6.5e-17 92.4 284 34.5
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.4e-14 84.7 156 40.4
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 2.6e-13 80.5 204 33.3
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.7e-12 76.6 88 51.1
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 3.7e-12 76.6 329 26.4
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.8e-11 74.3 328 26.5
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 7.0e-11 72.4 315 29.2
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 2.2e-09 67.4 243 29.2
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 8.5e-09 65.5 290 30.3
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 2.3e-06 57.4 163 31.3


User provided reference genes

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