Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007209 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.0e-60 236.5 117 100.0
Ah.05g167520 Amaranthus hybridus HOM05D000219 ORTHO05D000226 3.0e-23 112.1 80 71.2
AUR62026786 Chenopodium quinoa HOM05D003899 ORTHO05D003655 7.0e-17 90.9 123 50.4
AUR62013490 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.3e-15 86.7 121 48.8
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 1.4e-12 76.6 103 43.7
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.7e-08 62.4 95 37.9
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 4.6e-08 61.6 64 45.3
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.3e-07 60.1 70 44.3
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 1.3e-07 60.1 86 39.5
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 1.7e-07 59.7 80 42.5
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 2.3e-07 59.3 49 53.1
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 3.9e-07 58.5 108 38.0
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.9e-07 58.5 61 44.3
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 5.1e-07 58.2 73 41.1
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 5.1e-07 58.2 61 42.6
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 6.6e-07 57.8 74 43.2
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 6.6e-07 57.8 59 50.8
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 6.6e-07 57.8 68 42.6
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 6.6e-07 57.8 61 44.3
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 6.6e-07 57.8 98 36.7
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 8.6e-07 57.4 98 34.7
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 1.1e-06 57.0 66 36.4
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 1.1e-06 57.0 79 36.7
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 1.5e-06 56.6 96 38.5
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 1.5e-06 56.6 109 36.7
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.9e-06 56.2 96 40.6
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 2.5e-06 55.8 101 39.6
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 3.3e-06 55.5 73 41.1
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.3e-06 55.5 70 44.3
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.3e-06 55.5 70 44.3
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 3.3e-06 55.5 84 35.7
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 3.3e-06 55.5 94 34.0
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 3.3e-06 55.5 79 36.7
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 3.3e-06 55.5 61 42.6
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 4.3e-06 55.1 102 39.2
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 4.3e-06 55.1 43 55.8
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 5.6e-06 54.7 49 53.1
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 5.6e-06 54.7 59 44.1
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 7.3e-06 54.3 61 42.6
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.3e-06 54.3 61 42.6
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 9.5e-06 53.9 82 41.5
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 9.5e-06 53.9 74 36.5
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 9.5e-06 53.9 87 33.3


User provided reference genes

Program Settings