Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-178 629.8 303 100.0
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.5e-175 619.4 303 97.7
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.7e-155 552.7 301 87.4
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.3e-150 536.6 303 82.5
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 6.2e-150 534.3 364 73.6
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.1e-138 496.9 303 76.2
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 9.3e-138 493.8 303 75.2
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 4.6e-137 491.5 303 74.9
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 6.7e-136 487.6 303 72.6
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.1e-135 486.9 302 75.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.8e-134 482.3 303 73.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.7e-134 481.9 301 71.8
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 4.8e-134 481.5 303 71.6
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.8e-133 479.6 303 71.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 3.1e-133 478.8 301 71.1
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 3.4e-132 475.3 304 72.4
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.4e-132 475.3 304 72.4
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 4.5e-132 474.9 303 71.3
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.0e-131 473.8 302 73.8
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 2.9e-131 472.2 302 73.5
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 3.8e-131 471.9 303 70.6
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 6.5e-131 471.1 302 70.2
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 8.5e-131 470.7 300 70.7
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 8.5e-131 470.7 296 75.7
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 8.5e-131 470.7 303 70.6
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.4e-130 469.9 302 71.5
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.9e-130 469.5 300 70.7
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 4.2e-130 468.4 301 69.8
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 4.2e-130 468.4 300 72.7
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 7.2e-130 467.6 303 70.3
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.2e-129 466.8 302 70.5
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.6e-129 466.5 294 72.8
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.6e-129 466.5 303 69.6
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.7e-129 465.7 303 70.6
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.7e-129 465.7 300 70.0
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 3.6e-129 465.3 303 69.6
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 4.6e-129 464.9 303 69.0
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 7.9e-129 464.2 302 70.5
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 1.0e-128 463.8 301 69.8
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.0e-128 463.8 300 69.7
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.4e-128 463.4 303 69.3
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 1.4e-128 463.4 302 69.5
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.8e-128 463.0 303 69.3
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.0e-128 462.2 302 70.5
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 5.1e-128 461.5 300 71.7
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-127 460.3 300 69.3
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 1.5e-127 459.9 299 69.6
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.0e-127 459.5 304 69.1
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.3e-127 458.8 300 69.0
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 3.3e-127 458.8 303 69.0
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 3.3e-127 458.8 302 70.2
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 7.4e-127 457.6 302 69.9
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.7e-126 456.4 300 68.3
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.2e-126 456.1 300 69.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.7e-126 455.3 301 70.1
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 3.7e-126 455.3 302 69.2
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-125 453.8 300 68.3
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.8e-125 453.0 302 68.9
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.4e-125 452.6 302 69.5
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 2.4e-125 452.6 311 65.6
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 4.1e-125 451.8 303 71.0
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.2e-124 450.3 299 70.2
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 1.5e-124 449.9 301 71.1
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 3.4e-124 448.7 300 67.3
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.4e-124 448.7 302 69.2
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.0e-123 447.2 304 70.4
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.3e-123 446.8 302 68.2
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 1.7e-123 446.4 301 70.8
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 2.9e-123 445.7 302 68.2
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 3.8e-123 445.3 304 70.1
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 5.0e-123 444.9 304 70.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 6.5e-123 444.5 304 70.1
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 6.5e-123 444.5 302 68.2
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 8.5e-123 444.1 302 67.9
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 9.4e-122 440.7 301 69.8
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.6e-121 439.9 303 68.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 7.9e-121 437.6 297 67.3
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.0e-120 437.2 302 67.2
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-119 432.6 303 66.7
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 7.4e-119 431.0 298 69.5
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 9.7e-119 430.6 302 69.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.2e-118 429.5 303 66.3
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 6.3e-118 427.9 302 65.6
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.4e-117 426.0 304 64.1
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 4.1e-117 425.2 305 63.6
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 4.2e-114 415.2 291 64.9
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.6e-113 413.3 302 63.9
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.1e-109 400.6 272 67.6
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 7.7e-108 394.4 292 63.4
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.2e-103 380.6 232 74.1
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 4.4e-103 378.6 302 61.3
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 3.7e-102 375.6 298 58.4
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.7e-100 369.4 301 57.5
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 2.7e-100 369.4 301 57.5
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.3e-99 366.3 306 58.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.1e-98 364.0 298 59.1
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-97 360.5 220 74.5
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.3e-94 350.5 251 63.7
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 7.8e-92 341.3 266 59.8
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 6.8e-88 328.2 302 52.6
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.7e-87 325.1 228 64.9
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.9e-82 310.1 218 68.3
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.2e-81 307.4 220 66.4
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 5.8e-79 298.5 201 68.2
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 7.0e-77 291.6 201 67.2
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.0e-76 290.0 201 66.2
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 5.4e-69 265.4 269 47.6
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 2.2e-62 243.4 278 42.8
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 8.4e-62 241.5 203 54.7
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 8.4e-62 241.5 203 54.7
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 8.4e-54 214.9 148 66.9
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 2.4e-53 213.4 120 78.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 4.8e-41 172.6 196 44.4
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 5.1e-35 152.5 88 83.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 6.9e-32 142.1 129 51.2
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.4e-29 134.4 113 54.9
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.0e-27 128.3 112 52.7
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.3e-26 122.9 80 72.5
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 3.8e-22 109.8 97 49.5
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 2.5e-21 107.1 68 67.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 5.5e-21 105.9 76 60.5
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.0e-14 85.1 53 69.8
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 8.2e-09 65.5 80 41.2
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 3.1e-08 63.5 124 31.5
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 9.1e-08 62.0 59 42.4
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 7.7e-07 58.9 41 61.0


User provided reference genes

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