Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007178 Chenopodium quinoa HOM05D001263 ORTHO05D031656 3.6e-78 295.0 173 100.0
AUR62018826 Chenopodium quinoa HOM05D000048 ORTHO05D031656 2.9e-35 152.5 121 85.1
EL10Ac5g12253 Beta vulgaris HOM05D001263 ORTHO05D031656 6.3e-30 134.8 140 55.0
Hund04669 Selenicereus undatus HOM05D001263 ORTHO05D001120 2.5e-18 96.3 139 45.3
Hund11785 Selenicereus undatus HOM05D001263 ORTHO05D001120 3.6e-17 92.4 161 37.3
EL10Ac3g05757 Beta vulgaris HOM05D001263 ORTHO05D001120 1.8e-16 90.1 168 39.3
Hund04851 Selenicereus undatus HOM05D001263 ORTHO05D001120 4.4e-15 85.5 160 37.5
QL12p039031 Quercus lobata HOM05D001263 ORTHO05D001120 1.7e-11 73.6 159 34.6
vmacro09874 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 2.9e-11 72.8 160 33.8
CSS0022137 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 3.8e-11 72.4 158 37.3
CiPaw.03G099000 Carya illinoinensis HOM05D001263 ORTHO05D001120 6.5e-11 71.6 159 35.8
AUR62016072 Chenopodium quinoa HOM05D001263 ORTHO05D001120 6.5e-11 71.6 156 34.6
AUR62021282 Chenopodium quinoa HOM05D001263 ORTHO05D001120 8.5e-11 71.2 158 34.2
AUR62016073 Chenopodium quinoa HOM05D001263 ORTHO05D001120 1.1e-10 70.9 158 34.2
QL12p039006 Quercus lobata HOM05D001263 ORTHO05D001120 2.5e-10 69.7 158 32.9
vmacro09873 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 3.2e-10 69.3 154 33.8
Hund04652 Selenicereus undatus HOM05D001263 ORTHO05D001120 7.2e-10 68.2 146 35.6
Aqoxy7G00518 Aquilegia oxysepala HOM05D001263 ORTHO05D001120 1.2e-09 67.4 160 33.1
MD01G1191600 Malus domestica HOM05D001263 ORTHO05D001120 2.7e-09 66.2 167 30.5
Rhsim09G0194900 Rhododendron simsii HOM05D001263 ORTHO05D001120 2.7e-09 66.2 156 34.6
vmacro22546 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 3.6e-09 65.9 164 31.1
HanXRQChr07g0206721 Helianthus annuus HOM05D001263 ORTHO05D001120 6.1e-09 65.1 163 31.9
Ciclev10006639m.g Citrus clementina HOM05D001263 ORTHO05D001120 8.0e-09 64.7 151 31.8
Oeu056161.1 Olea europaea HOM05D001263 ORTHO05D001120 8.0e-09 64.7 162 33.3
Oeu056171.1 Olea europaea HOM05D001263 ORTHO05D001120 8.0e-09 64.7 162 33.3
SalBow4G0696 Salvia bowleyana HOM05D001263 ORTHO05D001120 8.0e-09 64.7 152 34.2
SalBow4G1523 Salvia bowleyana HOM05D001263 ORTHO05D001120 8.0e-09 64.7 152 34.2
vmacro22545 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 8.0e-09 64.7 161 34.8
vmacro23175 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 8.0e-09 64.7 161 34.8
Ah.13g067630 Amaranthus hybridus HOM05D001263 ORTHO05D001120 1.0e-08 64.3 159 32.1
Rhsim03G0173900 Rhododendron simsii HOM05D001263 ORTHO05D001120 1.0e-08 64.3 155 33.5
Thhalv10014694m.g Eutrema salsugineum HOM05D001263 ORTHO05D001120 1.4e-08 63.9 160 30.6
Ah.07g208550 Amaranthus hybridus HOM05D001263 ORTHO05D001120 2.3e-08 63.2 148 33.8
Actinidia03094 Actinidia chinensis HOM05D001263 ORTHO05D001120 3.0e-08 62.8 155 32.9
CSS0038169 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 3.0e-08 62.8 136 36.8
TWI14G0763 Tripterygium wilfordii HOM05D001263 ORTHO05D001120 3.0e-08 62.8 165 30.3
Dinv28514 Davidia involucrata HOM05D001263 ORTHO05D001120 4.0e-08 62.4 155 32.9
CAN.G28.4 Capsicum annuum HOM05D001263 ORTHO05D001120 5.2e-08 62.0 154 32.5
Dinv35129 Davidia involucrata HOM05D001263 ORTHO05D001120 5.2e-08 62.0 170 28.2
Oeu056169.1 Olea europaea HOM05D001263 ORTHO05D001120 5.2e-08 62.0 175 33.1
Nitab4.5_0001757g0020 Nicotiana tabacum HOM05D001263 ORTHO05D001120 8.8e-08 61.2 160 31.2
Oeu056174.1 Olea europaea HOM05D001263 ORTHO05D001120 8.8e-08 61.2 160 31.9
Sc19g0001770 Simmondsia chinensis HOM05D001263 ORTHO05D001120 8.8e-08 61.2 155 33.5
vmacro06751 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 8.8e-08 61.2 154 34.4
vmacro23177 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 8.8e-08 61.2 154 34.4
CAN.G1283.1 Capsicum annuum HOM05D001263 ORTHO05D001120 1.2e-07 60.8 154 33.1
Nitab4.5_0000072g0020 Nicotiana tabacum HOM05D001263 ORTHO05D001120 1.2e-07 60.8 160 33.1
CiPaw.03G099100 Carya illinoinensis HOM05D001263 ORTHO05D001120 1.5e-07 60.5 162 31.5
COL.COLO4_14215 Corchorus olitorius HOM05D001263 ORTHO05D001120 1.5e-07 60.5 159 33.3
Lsat_1_v5_gn_9_53541 Lactuca sativa HOM05D001263 ORTHO05D001120 1.5e-07 60.5 159 32.1
Prupe.2G286000 Prunus persica HOM05D001263 ORTHO05D001120 1.5e-07 60.5 159 32.1
Sopen03g002910 Solanum pennellii HOM05D001263 ORTHO05D001120 1.5e-07 60.5 140 36.4
Cc02_g03660 Coffea canephora HOM05D001263 ORTHO05D001120 2.0e-07 60.1 161 33.5
Cc02_g28190 Coffea canephora HOM05D001263 ORTHO05D001120 2.6e-07 59.7 151 31.8
FAN13G0672 Fragaria x ananassa HOM05D001263 ORTHO05D001120 2.6e-07 59.7 162 30.2
Cc02_g03670 Coffea canephora HOM05D001263 ORTHO05D001120 3.4e-07 59.3 144 32.6
Gorai.008G282400 Gossypium raimondii HOM05D001263 ORTHO05D001120 3.4e-07 59.3 162 32.7
HanXRQChr02g0058551 Helianthus annuus HOM05D001263 ORTHO05D001120 3.4e-07 59.3 162 29.0
Nitab4.5_0007466g0010 Nicotiana tabacum HOM05D001263 ORTHO05D001120 3.4e-07 59.3 157 29.3
EL10Ac3g05755 Beta vulgaris HOM05D001263 ORTHO05D001120 4.4e-07 58.9 157 31.8
FAN04G0053 Fragaria x ananassa HOM05D001263 ORTHO05D001120 4.4e-07 58.9 150 30.0
Hma1.2p1_0371F.1_g138320 Hydrangea macrophylla HOM05D001263 ORTHO05D001120 4.4e-07 58.9 160 33.8
PSO478G1422 Papaver somniferum HOM05D001263 ORTHO05D001120 4.4e-07 58.9 172 27.9
Sed0018083 Sechium edule HOM05D001263 ORTHO05D001120 4.4e-07 58.9 170 27.1
BcaB05g23987 Brassica carinata HOM05D001263 ORTHO05D001120 5.7e-07 58.5 160 27.5
Ciclev10024422m.g Citrus clementina HOM05D001263 ORTHO05D001120 5.7e-07 58.5 160 33.1
COL.COLO4_14216 Corchorus olitorius HOM05D001263 ORTHO05D001120 5.7e-07 58.5 152 31.6
Peaxi162Scf00000g00723 Petunia axillaris HOM05D001263 ORTHO05D001120 5.7e-07 58.5 165 30.3
Peaxi162Scf00156g00213 Petunia axillaris HOM05D001263 ORTHO05D001120 5.7e-07 58.5 159 33.3
Nitab4.5_0000347g0090 Nicotiana tabacum HOM05D001263 ORTHO05D001120 7.5e-07 58.2 158 29.7
Solyc09g074805.1 Solanum lycopersicum HOM05D001263 ORTHO05D001120 7.5e-07 58.2 161 34.8
Cc02_g28210 Coffea canephora HOM05D001263 ORTHO05D001120 9.8e-07 57.8 162 29.6
COL.COLO4_28825 Corchorus olitorius HOM05D001263 ORTHO05D002559 9.8e-07 57.8 160 31.9
Oeu056162.1 Olea europaea HOM05D001263 ORTHO05D001120 9.8e-07 57.8 142 32.4
QL12p038997 Quercus lobata HOM05D001263 ORTHO05D001120 9.8e-07 57.8 174 29.3
Sc13g0008180 Simmondsia chinensis HOM05D001263 ORTHO05D001120 9.8e-07 57.8 156 30.1
Solyc03g006910.3 Solanum lycopersicum HOM05D001263 ORTHO05D001120 9.8e-07 57.8 162 32.7
CARHR048680 Cardamine hirsuta HOM05D001263 ORTHO05D001120 1.3e-06 57.4 166 28.3
Duzib068G0300 Durio zibethinus HOM05D001263 ORTHO05D001120 1.3e-06 57.4 159 32.7
Gohir.D12G263400 Gossypium hirsutum HOM05D001263 ORTHO05D001120 1.3e-06 57.4 162 32.1
HanXRQChr14g0461851 Helianthus annuus HOM05D001263 ORTHO05D001120 1.3e-06 57.4 159 27.7
Oeu056156.1 Olea europaea HOM05D001263 ORTHO05D001120 1.3e-06 57.4 160 32.5
vmacro06752 Vaccinium macrocarpon HOM05D001263 ORTHO05D001120 1.3e-06 57.4 150 30.7
CAN.G339.46 Capsicum annuum HOM05D001263 ORTHO05D001120 1.7e-06 57.0 161 34.2
Oeu039232.1 Olea europaea HOM05D001263 ORTHO05D001120 1.7e-06 57.0 167 32.3
Rhsim03G0174000 Rhododendron simsii HOM05D001263 ORTHO05D001120 1.7e-06 57.0 164 33.5
Sed0011491 Sechium edule HOM05D001263 ORTHO05D001120 1.7e-06 57.0 161 28.6
Actinidia13536 Actinidia chinensis HOM05D001263 ORTHO05D001120 2.2e-06 56.6 162 30.2
ClCG01G003370 Citrullus lanatus HOM05D001263 ORTHO05D001120 2.2e-06 56.6 163 28.8
Ciclev10006628m.g Citrus clementina HOM05D001263 ORTHO05D001120 2.2e-06 56.6 154 32.5
Manes.06G140600 Manihot esculenta HOM05D001263 ORTHO05D001120 2.2e-06 56.6 160 31.2
Peaxi162Scf01178g00113 Petunia axillaris HOM05D001263 ORTHO05D001120 2.2e-06 56.6 159 30.8
MSTRG.27154 Avicennia marina HOM05D001263 ORTHO05D001120 2.8e-06 56.2 159 30.2
MSTRG.27155 Avicennia marina HOM05D001263 ORTHO05D001120 2.8e-06 56.2 148 31.8
Sopen09g029650 Solanum pennellii HOM05D001263 ORTHO05D001120 2.8e-06 56.2 137 36.5
Migut.F00404 Erythranthe guttata HOM05D001263 ORTHO05D001120 3.7e-06 55.8 160 28.1
FAN18G2099 Fragaria x ananassa HOM05D001263 ORTHO05D001120 3.7e-06 55.8 162 29.6
Gohir.A12G262900 Gossypium hirsutum HOM05D001263 ORTHO05D001120 3.7e-06 55.8 162 32.1
Manes.14G031500 Manihot esculenta HOM05D001263 ORTHO05D001120 3.7e-06 55.8 158 31.0
Nitab4.5_0001757g0030 Nicotiana tabacum HOM05D001263 ORTHO05D001120 3.7e-06 55.8 165 29.1
Oeu039231.1 Olea europaea HOM05D001263 ORTHO05D001120 3.7e-06 55.8 167 32.3
Oeu042593.1 Olea europaea HOM05D001263 ORTHO05D001120 3.7e-06 55.8 158 32.9
PSO782G0335 Papaver somniferum HOM05D001263 ORTHO05D001120 3.7e-06 55.8 159 29.6
PGR042G1754 Punica granatum HOM05D001263 ORTHO05D001120 3.7e-06 55.8 156 33.3
FvH4_5g01160 Fragaria vesca HOM05D001263 ORTHO05D001120 4.9e-06 55.5 162 29.0
Lsat_1_v5_gn_2_130100 Lactuca sativa HOM05D000559 ORTHO05D000596 4.9e-06 55.5 163 31.3
Oeu039230.1 Olea europaea HOM05D001263 ORTHO05D001120 4.9e-06 55.5 162 30.2
QL12p038971 Quercus lobata HOM05D001263 ORTHO05D001120 4.9e-06 55.5 150 32.7
CSS0040348 Camellia sinensis var. sinensis HOM05D001263 ORTHO05D001120 6.3e-06 55.1 138 34.1
Haze_13800 Corylus avellana HOM05D001263 ORTHO05D001120 6.3e-06 55.1 161 30.4
Dinv39039 Davidia involucrata HOM05D001263 ORTHO05D001120 6.3e-06 55.1 159 30.2
Duzib084G1059 Durio zibethinus HOM05D001263 ORTHO05D001120 6.3e-06 55.1 159 28.3
Thhalv10009922m.g Eutrema salsugineum HOM05D001263 ORTHO05D001120 6.3e-06 55.1 169 26.6
Potri.012G132000 Populus trichocarpa HOM05D001263 ORTHO05D001120 6.3e-06 55.1 158 29.7
Sabra12G0099300 Salix brachista HOM05D001263 ORTHO05D001120 6.3e-06 55.1 160 30.0
Manes.06G140500 Manihot esculenta HOM05D001263 ORTHO05D001120 8.3e-06 54.7 159 31.4
Nitab4.5_0002060g0020 Nicotiana tabacum HOM05D001263 ORTHO05D001120 8.3e-06 54.7 158 41.1
Potri.001G113400 Populus trichocarpa HOM05D001263 ORTHO05D001120 8.3e-06 54.7 158 29.7
Sopen06g011230 Solanum pennellii HOM05D001263 ORTHO05D001120 8.3e-06 54.7 152 30.3
Thecc.03G165700 Theobroma cacao HOM05D001263 ORTHO05D001120 8.3e-06 54.7 159 32.7


User provided reference genes

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