Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1573.9 790 100.0
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1484.5 790 93.9
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 0.0e+00 1300.8 787 82.3
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 0.0e+00 1222.2 794 77.3
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 0.0e+00 1127.5 792 71.5
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.6e-304 1048.5 793 65.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 6.8e-281 970.7 799 60.2
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 5.2e-273 944.5 784 60.6
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.2e-269 933.3 800 58.5
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 8.6e-268 927.2 795 59.2
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 7.3e-267 924.1 795 59.2
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 1.1e-265 920.2 792 59.7
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.4e-265 919.8 802 58.6
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.8e-265 919.5 787 59.0
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.3e-265 919.1 786 59.2
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 2.6e-264 915.6 795 59.1
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 3.4e-264 915.2 802 58.4
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 7.6e-264 914.1 784 59.1
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.9e-263 912.1 801 58.3
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 6.4e-263 911.0 794 58.9
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 6.0e-261 904.4 793 59.6
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 6.0e-261 904.4 793 57.4
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 3.9e-260 901.7 793 58.6
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.5e-259 899.8 802 57.9
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 7.3e-259 897.5 797 58.7
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 7.3e-259 897.5 794 57.4
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 1.6e-258 896.3 793 58.4
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.7e-258 894.8 796 57.5
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 8.1e-258 894.0 796 57.4
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.2e-256 890.2 796 57.3
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 1.2e-256 890.2 789 58.9
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 4.4e-256 888.3 847 54.7
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 5.8e-256 887.9 792 57.4
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 7.6e-256 887.5 796 57.3
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 7.6e-256 887.5 796 57.3
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 3.2e-254 882.1 795 57.1
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 4.2e-254 881.7 797 57.2
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 2.7e-253 879.0 805 56.1
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.3e-252 875.9 803 55.3
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 3.0e-252 875.5 789 58.3
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 2.5e-251 872.5 793 57.3
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 4.3e-251 871.7 853 54.9
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 7.3e-251 870.9 804 56.5
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 2.8e-250 869.0 792 55.7
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 3.6e-250 868.6 803 56.9
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 8.1e-250 867.5 793 57.1
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.4e-249 866.7 797 56.1
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.6e-248 862.4 791 55.0
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 4.4e-248 861.7 787 56.7
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.7e-247 859.8 791 57.5
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 3.8e-247 858.6 800 54.8
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 8.4e-247 857.4 811 54.7
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 9.3e-246 854.0 811 54.4
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 8.7e-244 847.4 812 56.0
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 2.4e-241 839.3 799 53.7
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 3.4e-240 835.5 813 53.8
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 4.5e-240 835.1 847 52.4
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 9.3e-238 827.4 790 53.3
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.8e-236 823.2 629 65.0
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 9.6e-235 817.4 796 54.3
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 1.3e-234 817.0 800 53.8
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.6e-234 816.6 797 53.3
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.4e-233 812.8 792 53.7
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 4.9e-231 805.1 804 52.7
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 2.5e-230 802.7 805 51.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.0e-228 797.3 808 52.2
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 3.0e-228 795.8 796 52.4
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 5.7e-227 791.6 795 52.2
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 2.8e-226 789.3 808 51.2
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.7e-226 788.9 795 51.9
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 8.2e-226 787.7 803 51.9
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.8e-225 786.6 806 52.2
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 3.1e-225 785.8 805 51.1
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 5.9e-224 781.6 796 52.1
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.0e-223 780.8 797 52.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 6.1e-221 771.5 640 61.2
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.0e-220 770.8 802 51.4
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 7.4e-219 764.6 794 51.0
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 3.7e-218 762.3 795 51.3
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 2.4e-217 759.6 758 53.0
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 2.9e-215 752.7 803 51.9
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.0e-212 744.2 731 53.9
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 9.7e-211 737.6 801 51.1
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 3.1e-209 732.6 786 49.9
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.6e-208 729.6 833 49.9
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.4e-206 723.8 798 50.8
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.5e-203 713.8 780 47.6
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.4e-201 707.2 807 46.7
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 3.0e-188 662.9 669 52.5
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 3.4e-187 659.4 582 58.9
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.8e-185 653.7 784 47.1
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 3.5e-184 649.4 647 54.7
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 4.9e-170 602.4 805 43.1
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 6.2e-149 532.3 606 50.0
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 8.6e-143 511.9 790 39.6
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 4.5e-123 446.4 800 38.4
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 1.6e-117 427.9 797 37.3
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 4.3e-102 376.7 842 34.9
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 6.5e-90 336.3 301 56.5
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.1e-89 335.5 417 45.3
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 6.1e-88 329.7 842 31.6
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 6.5e-82 309.7 256 60.2
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 9.4e-81 305.8 252 61.5
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 9.7e-78 295.8 285 52.3
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 5.3e-76 290.0 285 51.2
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 1.7e-74 285.0 252 55.6
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 8.0e-72 276.2 309 48.9
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 6.8e-55 219.9 197 57.4
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 9.2e-44 183.0 146 60.3
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 3.5e-43 181.0 221 43.9
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 3.3e-41 174.5 204 43.1
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.9e-36 158.7 276 38.0
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.6e-35 155.6 168 48.2
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-33 146.7 1009 22.4
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 3.5e-27 127.9 87 70.1
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 6.2e-16 90.5 117 43.6
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 4.9e-13 80.9 168 35.1
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 9.3e-12 76.6 237 27.4
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 3.9e-10 71.2 45 66.7
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 2.4e-07 62.0 67 40.3
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 2.0e-06 58.9 60 51.7
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 4.5e-06 57.8 50 54.0


User provided reference genes

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