Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.9e-196 688.3 339 100.0
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 4.2e-187 657.9 354 92.4
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.8e-174 615.9 353 87.0
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 2.4e-174 615.5 353 87.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 3.2e-171 605.1 351 84.6
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 8.2e-167 590.5 352 81.8
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 1.6e-157 559.7 357 76.8
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 4.5e-157 558.1 352 76.7
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.0e-156 557.0 357 76.5
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.0e-156 557.0 357 76.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.3e-156 556.6 357 75.6
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.7e-156 556.2 356 76.1
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 6.5e-156 554.3 352 76.7
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 6.5e-156 554.3 352 77.0
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 8.5e-156 553.9 357 77.0
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 1.9e-155 552.7 357 75.6
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 3.2e-155 552.0 352 76.7
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 4.2e-155 551.6 352 76.4
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 7.2e-155 550.8 352 76.7
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 9.4e-155 550.4 352 76.7
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.6e-154 549.7 352 76.7
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 2.1e-154 549.3 352 75.9
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.7e-154 548.9 353 74.8
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 4.7e-154 548.1 351 76.1
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.0e-153 547.0 352 75.9
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 2.3e-153 545.8 354 75.1
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 2.3e-153 545.8 352 75.9
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 3.0e-153 545.4 352 75.3
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 5.2e-153 544.7 351 75.5
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.2e-152 543.5 350 74.6
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 1.2e-152 543.5 352 75.3
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 2.0e-152 542.7 352 75.3
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 2.6e-152 542.3 350 75.4
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.4e-152 541.6 350 74.9
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.4e-152 541.6 350 74.6
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 7.5e-152 540.8 352 75.6
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 1.7e-151 539.7 353 73.4
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 1.7e-151 539.7 352 74.7
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.8e-151 538.9 352 75.3
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 2.8e-151 538.9 351 75.8
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 4.8e-151 538.1 352 75.0
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 4.8e-151 538.1 352 75.0
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 8.2e-151 537.3 357 73.1
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.8e-150 536.2 356 73.9
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 1.8e-150 536.2 352 74.7
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 3.1e-150 535.4 352 73.9
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 3.1e-150 535.4 352 73.6
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.6e-149 533.1 353 73.4
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 2.7e-149 532.3 352 73.0
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 4.5e-149 531.6 352 73.9
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.3e-148 530.0 351 72.1
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.7e-148 529.6 355 72.4
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.9e-148 528.9 358 72.9
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.5e-147 525.8 353 73.1
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.5e-147 525.8 352 73.3
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 3.2e-147 525.4 352 71.0
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 4.2e-147 525.0 353 71.7
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 8.0e-146 520.8 352 71.6
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 8.0e-146 520.8 352 72.4
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 2.3e-145 519.2 352 71.6
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.3e-145 519.2 352 72.2
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 3.0e-145 518.8 350 72.9
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 3.0e-145 518.8 350 72.9
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 3.4e-144 515.4 353 72.0
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 5.7e-144 514.6 361 70.1
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.2e-143 512.7 350 71.7
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 1.1e-142 510.4 350 71.1
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 3.1e-142 508.8 357 70.6
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 7.0e-142 507.7 353 72.2
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.0e-141 506.1 350 71.4
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 2.0e-141 506.1 383 68.1
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 2.0e-141 506.1 369 68.6
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 3.5e-141 505.4 369 68.3
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 5.9e-141 504.6 350 70.6
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 7.7e-141 504.2 350 70.0
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.3e-140 502.7 365 68.5
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.3e-140 502.7 350 70.0
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 8.6e-140 500.7 350 70.0
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 9.5e-139 497.3 340 71.5
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 1.2e-138 496.9 366 66.7
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 8.0e-138 494.2 352 68.5
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 4.0e-137 491.9 352 70.7
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.8e-134 483.0 353 67.1
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 6.1e-130 468.0 305 75.7
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 6.8e-129 464.5 258 84.5
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 5.8e-128 461.5 356 64.6
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 7.5e-128 461.1 299 76.9
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 2.7e-125 452.6 361 62.9
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 6.6e-124 448.0 258 80.6
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 5.2e-121 438.3 283 76.7
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 2.9e-119 432.6 283 75.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 1.0e-116 424.1 357 59.9
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.3e-116 423.7 353 61.2
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 9.5e-115 417.5 357 59.4
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 5.8e-112 408.3 306 68.3
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.3e-108 397.1 214 84.6
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 4.6e-101 372.1 390 51.5
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.3e-100 370.5 213 78.9
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 6.9e-97 358.2 240 74.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 5.4e-94 348.6 227 77.1
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 3.7e-74 282.7 170 76.5
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 4.5e-56 222.6 198 58.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 3.1e-41 173.3 102 76.5
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.6e-40 171.0 104 74.0
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 1.0e-39 168.3 105 72.4
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 2.9e-39 166.8 104 73.1
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.5e-38 164.5 116 65.5
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.2e-38 162.9 103 70.9
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.2e-38 162.9 103 70.9
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.8e-36 157.5 116 63.8
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 3.7e-26 123.2 82 68.3
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.4e-17 94.7 69 60.9
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.7e-16 90.5 94 57.4
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.8e-12 77.8 54 68.5
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 3.1e-12 77.0 54 68.5
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 6.8e-12 75.9 54 68.5
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.7e-10 71.2 54 64.8
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 3.7e-10 70.1 43 69.8
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 1.4e-09 68.2 34 97.1
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 1.2e-08 65.1 215 27.4


User provided reference genes

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