Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007000 Chenopodium quinoa HOM05D007661 ORTHO05D009671 2.2e-55 220.3 332 100.0
AUR62000645 Chenopodium quinoa HOM05D007661 ORTHO05D009671 3.9e-52 209.5 332 98.5
Ah.02g111950 Amaranthus hybridus HOM05D007661 ORTHO05D009671 8.3e-39 165.2 94 84.0
Ah.07g201000 Amaranthus hybridus HOM05D007661 ORTHO05D009671 1.3e-36 157.9 94 80.9
Sc09g0001750 Simmondsia chinensis HOM05D007661 ORTHO05D009671 2.9e-31 140.2 94 69.1
MD04G1235400 Malus domestica HOM05D007661 ORTHO05D009671 1.6e-26 124.4 94 57.4
Sed0008175 Sechium edule HOM05D007661 ORTHO05D009671 8.1e-26 122.1 94 58.5
ClCG06G009060 Citrullus lanatus HOM05D007661 ORTHO05D009671 3.1e-25 120.2 92 63.0
CsaV3_1G045690 Cucumis sativus L. HOM05D007661 ORTHO05D009671 3.1e-25 120.2 92 63.0
Lsat_1_v5_gn_5_23180 Lactuca sativa HOM05D007661 ORTHO05D009671 1.2e-24 118.2 94 59.6
GSVIVG01026360001 Vitis vinifera HOM05D007661 ORTHO05D009671 1.2e-24 118.2 332 80.4
HanXRQChr05g0151261 Helianthus annuus HOM05D007661 ORTHO05D009671 1.5e-24 117.9 93 61.3
Dinv10853 Davidia involucrata HOM05D007661 ORTHO05D009671 2.0e-24 117.5 94 58.5
AT5G18390 Arabidopsis thaliana HOM05D007661 ORTHO05D009671 2.6e-24 117.1 94 58.5
CANSAT54G2964 Cannabis sativa HOM05D007661 ORTHO05D009671 2.6e-24 117.1 94 55.3
Carub.0006s1665 Capsella rubella HOM05D007661 ORTHO05D009671 2.6e-24 117.1 94 58.5
CARHR194640 Cardamine hirsuta HOM05D007661 ORTHO05D009671 2.6e-24 117.1 94 60.6
Sp6g25930 Schrenkiella parvula HOM05D007661 ORTHO05D009671 2.6e-24 117.1 93 61.3
DCAR_020137 Daucus carota HOM05D007661 ORTHO05D009671 3.4e-24 116.7 330 85.2
ECA246G4719 Erigeron canadensis HOM05D007661 ORTHO05D009671 4.4e-24 116.3 94 59.6
Rhsim05G0075100 Rhododendron simsii HOM05D004968 ORTHO05D005922 4.4e-24 116.3 94 55.3
Aa31LG11G11280 Aethionema arabicum HOM05D007661 ORTHO05D009671 5.8e-24 115.9 91 61.5
AL6G29620 Arabidopsis lyrata HOM05D007661 ORTHO05D009671 5.8e-24 115.9 94 57.4
Haze_10690 Corylus avellana HOM05D007661 ORTHO05D009671 5.8e-24 115.9 94 55.3
Haze_10692 Corylus avellana HOM05D007661 ORTHO05D009671 5.8e-24 115.9 94 55.3
vmacro17503 Vaccinium macrocarpon HOM05D004968 ORTHO05D005922 7.6e-24 115.5 94 55.3
Lj4P789T29 Lonicera japonica HOM05D007661 ORTHO05D009671 2.2e-23 114.0 94 61.7
Prupe.6G355300 Prunus persica HOM05D007661 ORTHO05D009671 2.2e-23 114.0 94 54.3
RcHm_v2.0_Chr7g0230951 Rosa chinensis HOM05D007661 ORTHO05D009671 2.2e-23 114.0 94 54.3
Thhalv10013477m.g Eutrema salsugineum HOM05D007661 ORTHO05D009671 2.9e-23 113.6 91 61.5
THA.LOC104820748 Tarenaya hassleriana HOM05D007661 ORTHO05D009671 2.9e-23 113.6 94 57.4
Cc11_g03190 Coffea canephora HOM05D007661 ORTHO05D009671 3.8e-23 113.2 94 59.6
Gohir.A09G142300 Gossypium hirsutum HOM05D007661 ORTHO05D009671 3.8e-23 113.2 94 60.6
CiPaw.06G152900 Carya illinoinensis HOM05D007661 ORTHO05D009671 4.9e-23 112.8 94 56.4
Gorai.013G189200 Gossypium raimondii HOM05D007661 ORTHO05D009671 4.9e-23 112.8 94 59.6
Gorai.013G189900 Gossypium raimondii HOM05D007661 ORTHO05D009671 4.9e-23 112.8 94 59.6
A03p08810 Brassica napus HOM05D007661 ORTHO05D009671 6.4e-23 112.5 92 58.7
C03p10300 Brassica napus HOM05D007661 ORTHO05D009671 6.4e-23 112.5 92 58.7
BraA03t10206Z Brassica rapa HOM05D007661 ORTHO05D009671 6.4e-23 112.5 92 58.7
CSS0027415 Camellia sinensis var. sinensis HOM05D007661 ORTHO05D009671 1.1e-22 111.7 94 58.5
Gohir.D13G171600 Gossypium hirsutum HOM05D007661 ORTHO05D009671 1.1e-22 111.7 94 59.6
CAN.G742.39 Capsicum annuum HOM05D007661 ORTHO05D009671 1.4e-22 111.3 94 57.4
FvH4_4g11972 Fragaria vesca HOM05D007661 ORTHO05D009671 1.4e-22 111.3 94 54.3
FAN12G0412 Fragaria x ananassa HOM05D007661 ORTHO05D009671 1.4e-22 111.3 94 54.3
PGSC0003DMG400017922 Solanum tuberosum HOM05D007661 ORTHO05D009671 1.4e-22 111.3 94 57.4
Thecc.05G264500 Theobroma cacao HOM05D007661 ORTHO05D009671 1.4e-22 111.3 94 57.4
Gohir.D13G171200 Gossypium hirsutum HOM05D007661 ORTHO05D009671 2.4e-22 110.5 94 58.5
COL.COLO4_38175 Corchorus olitorius HOM05D007661 ORTHO05D009671 3.2e-22 110.2 94 59.6
BolC3t13510H Brassica oleracea HOM05D007661 ORTHO05D009671 5.4e-22 109.4 92 58.7
Solyc09g097840.2 Solanum lycopersicum HOM05D007661 ORTHO05D009671 5.4e-22 109.4 94 57.4
BcaB01g05190 Brassica carinata HOM05D007661 ORTHO05D009671 7.1e-22 109.0 91 58.2
Gohir.A11G054800 Gossypium hirsutum HOM05D007661 ORTHO05D009671 7.1e-22 109.0 94 58.5
Oeu027656.1 Olea europaea HOM05D007661 ORTHO05D009671 7.1e-22 109.0 91 60.4
Atru.chr2.1141 Acer truncatum HOM05D007661 ORTHO05D009671 1.6e-21 107.8 94 56.4
QL11p020645 Quercus lobata HOM05D007661 ORTHO05D009671 1.6e-21 107.8 96 50.0
Actinidia14816 Actinidia chinensis HOM05D007661 ORTHO05D009671 2.1e-21 107.5 93 57.0
BcaNung04935 Brassica carinata HOM05D007661 ORTHO05D009671 2.1e-21 107.5 91 56.0
Ca_18348_v3 Cicer arietinum L. HOM05D007661 ORTHO05D009671 2.1e-21 107.5 94 51.1
TWI60G0191 Tripterygium wilfordii HOM05D007661 ORTHO05D009671 4.6e-21 106.3 97 55.7
Medtr4g094245 Medicago truncatula HOM05D007661 ORTHO05D009671 6.0e-21 105.9 94 50.0
PSO017G1759 Papaver somniferum HOM05D007661 ORTHO05D009671 6.0e-21 105.9 94 58.5
PSO063G2745 Papaver somniferum HOM05D007661 ORTHO05D009671 6.0e-21 105.9 94 58.5
Sopen09g035780 Solanum pennellii HOM05D007661 ORTHO05D009671 7.8e-21 105.5 94 55.3
TAR362G0078 Trochodendron aralioides HOM05D007661 ORTHO05D009671 7.8e-21 105.5 94 57.4
Peaxi162Scf00286g00824 Petunia axillaris HOM05D007661 ORTHO05D009671 1.0e-20 105.1 91 56.0
Potri.019G025700 Populus trichocarpa HOM05D007661 ORTHO05D009671 1.0e-20 105.1 96 53.1
Migut.M01214 Erythranthe guttata HOM05D007661 ORTHO05D009671 1.7e-20 104.4 92 59.8
Eucgr.A00778 Eucalyptus grandis HOM05D007661 ORTHO05D009671 1.7e-20 104.4 94 53.2
SGA_v2.0_scaffold114G31974 Striga asiatica HOM05D003082 ORTHO05D003497 2.3e-20 104.0 91 57.1
TPR.G10461 Trifolium pratense HOM05D007661 ORTHO05D009671 2.3e-20 104.0 94 48.9
Psat7g098440 Pisum sativum HOM05D007661 ORTHO05D009671 3.9e-20 103.2 94 47.9
Gohir.A05G164100 Gossypium hirsutum HOM05D007661 ORTHO05D009671 8.7e-20 102.1 94 55.3
Nitab4.5_0000309g0340 Nicotiana tabacum HOM05D007661 ORTHO05D009671 8.7e-20 102.1 91 56.0
Nn1g08093 Nelumbo nucifera HOM05D007661 ORTHO05D009671 1.1e-19 101.7 93 54.8
Manes.09G145300 Manihot esculenta HOM05D007661 ORTHO05D009671 1.5e-19 101.3 95 53.7
MSTRG.15290 Avicennia marina HOM05D007661 ORTHO05D009671 2.5e-19 100.5 89 60.7
Lj4g0018525 Lotus japonicus HOM05D007661 ORTHO05D009671 2.5e-19 100.5 94 50.0
Lalb_Chr10g0097791 Lupinus albus HOM05D007661 ORTHO05D009671 9.6e-19 98.6 96 53.1
PGR004G2374 Punica granatum HOM05D007661 ORTHO05D009671 1.6e-18 97.8 92 55.4
ATR0907G005 Amborella trichopoda HOM05D007661 ORTHO05D009671 3.6e-18 96.7 94 54.3
SHI14379 Sapria himalayana HOM05D007661 ORTHO05D009671 4.8e-18 96.3 96 51.0
Glyma.05G118000 Glycine max HOM05D007661 ORTHO05D009671 1.1e-17 95.1 94 43.6
Phvul.002G208300 Phaseolus vulgaris HOM05D007661 ORTHO05D009671 3.4e-16 90.1 94 44.7
VMungo0251G1276 Vigna mungo HOM05D007661 ORTHO05D009671 2.2e-15 87.4 93 45.2
CDE02G3106 Ceratophyllum demersum HOM05D007661 ORTHO05D009671 7.1e-14 82.4 78 57.7
MELO3C024683.2 Cucumis melo HOM05D007661 ORTHO05D009671 1.6e-13 81.3 66 59.1
Ciclev10023479m.g Citrus clementina HOM05D007661 ORTHO05D009671 2.3e-12 77.4 47 76.6
Hund00396 Selenicereus undatus HOM05D007661 ORTHO05D009671 6.2e-10 69.3 40 80.0
Aqoxy3G03067 Aquilegia oxysepala HOM05D007661 ORTHO05D009671 6.9e-09 65.9 41 73.2
Sabra19G0035000 Salix brachista HOM05D003623 ORTHO05D004335 1.5e-08 64.7 38 81.6
HPP92_006964 Vanilla planifolia HOM05D007661 ORTHO05D009671 2.2e-07 60.8 71 47.9
MBI07_g09668_MAGBIO Magnolia biondii HOM05D007661 ORTHO05D009671 1.1e-06 58.5 34 76.5
Gohir.A07G094100 Gossypium hirsutum HOM05D022787 ORTHO05D021847 1.4e-06 58.2 33 78.8
ATR0564G099 Amborella trichopoda HOM05D002453 ORTHO05D002107 4.2e-06 56.6 97 34.0
A02p21230 Brassica napus HOM05D000424 ORTHO05D000355 4.2e-06 56.6 94 35.1
BraA02t07142Z Brassica rapa HOM05D000424 ORTHO05D000355 4.2e-06 56.6 94 35.1


User provided reference genes

Program Settings