Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006986 Chenopodium quinoa HOM05D004244 ORTHO05D004964 8.0e-72 273.9 159 100.0
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 3.2e-44 182.2 170 65.3
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 4.6e-35 151.8 183 51.4
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 8.6e-26 120.9 186 46.8
Ah.06g187950 Amaranthus hybridus HOM05D004244 ORTHO05D004964 3.8e-21 105.5 140 45.7
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.2e-20 102.1 179 38.0
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 1.6e-19 100.1 172 43.6
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 2.1e-19 99.8 173 40.5
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 7.8e-19 97.8 173 39.3
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 7.8e-19 97.8 170 39.4
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.0e-18 97.4 176 35.8
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.1e-17 94.0 174 36.8
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.1e-17 94.0 174 36.8
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.1e-17 94.0 174 36.8
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.5e-17 93.6 171 39.8
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.5e-17 92.8 179 39.1
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.5e-17 92.8 168 35.7
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.3e-17 92.0 168 35.7
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 1.3e-16 90.5 186 38.7
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.3e-16 90.5 171 36.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 1.6e-16 90.1 180 37.2
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 2.1e-16 89.7 167 37.7
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 2.1e-16 89.7 175 36.0
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 3.6e-16 89.0 167 37.1
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.8e-16 88.6 176 36.4
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 6.2e-16 88.2 170 38.2
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.4e-15 87.0 176 35.2
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 1.8e-15 86.7 168 33.9
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.1e-15 85.9 170 38.2
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 3.1e-15 85.9 168 33.9
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 3.1e-15 85.9 177 36.7
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 4.0e-15 85.5 167 35.9
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 4.0e-15 85.5 176 38.6
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 5.3e-15 85.1 167 43.7
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 5.3e-15 85.1 170 35.3
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 5.3e-15 85.1 176 35.2
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 6.9e-15 84.7 177 36.7
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 6.9e-15 84.7 169 34.9
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 9.0e-15 84.3 173 36.4
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 1.5e-14 83.6 175 33.7
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 2.0e-14 83.2 179 42.5
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 2.6e-14 82.8 172 37.2
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.4e-14 82.0 185 34.6
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 5.8e-14 81.6 163 43.6
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 7.6e-14 81.3 165 34.5
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 7.6e-14 81.3 176 41.5
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 7.6e-14 81.3 168 34.5
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 7.6e-14 81.3 177 34.5
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 1.3e-13 80.5 167 35.9
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 1.3e-13 80.5 178 33.1
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 1.3e-13 80.5 168 36.3
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.3e-13 80.5 176 36.9
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 1.7e-13 80.1 168 33.9
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.7e-13 80.1 175 45.7
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.7e-13 80.1 167 35.3
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 1.7e-13 80.1 166 34.3
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.2e-13 79.7 169 36.7
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 2.2e-13 79.7 167 43.1
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 2.2e-13 79.7 171 35.7
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 2.2e-13 79.7 170 38.8
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 3.8e-13 79.0 164 35.4
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 3.8e-13 79.0 170 33.5
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 4.9e-13 78.6 164 34.1
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 4.9e-13 78.6 164 34.1
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.9e-13 78.6 165 40.0
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 6.4e-13 78.2 188 31.9
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 6.4e-13 78.2 169 30.8
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 8.4e-13 77.8 170 33.5
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 8.4e-13 77.8 164 34.1
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 8.4e-13 77.8 164 34.8
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 8.4e-13 77.8 164 34.8
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.1e-12 77.4 174 39.1
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.1e-12 77.4 184 37.5
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 1.1e-12 77.4 156 37.2
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 1.4e-12 77.0 169 31.4
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.9e-12 76.6 180 40.0
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.4e-12 76.3 172 36.0
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 2.4e-12 76.3 166 36.1
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 2.4e-12 76.3 171 33.9
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 3.2e-12 75.9 168 41.7
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 5.4e-12 75.1 170 32.9
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 5.4e-12 75.1 164 34.1
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 5.4e-12 75.1 172 34.3
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 5.4e-12 75.1 171 42.1
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 7.1e-12 74.7 164 36.0
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 9.3e-12 74.3 170 39.4
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 1.2e-11 73.9 180 33.3
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 1.6e-11 73.6 166 42.2
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 2.1e-11 73.2 167 31.1
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 2.7e-11 72.8 171 34.5
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 3.5e-11 72.4 165 36.4
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 4.6e-11 72.0 169 34.3
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.0e-10 70.9 169 42.0
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 1.0e-10 70.9 176 31.2
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.3e-10 70.5 129 37.2
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 3.0e-10 69.3 175 34.3
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.5e-09 66.2 169 30.8
Aa31LG5G14830 Aethionema arabicum HOM05D004244 ORTHO05D004964 3.3e-09 65.9 158 31.0
BcaC01g04379 Brassica carinata HOM05D004244 ORTHO05D004964 4.3e-09 65.5 172 33.1
C03p40780 Brassica napus HOM05D004244 ORTHO05D004964 5.6e-09 65.1 169 33.7
BolC3t16346H Brassica oleracea HOM05D004244 ORTHO05D004964 5.6e-09 65.1 169 33.7
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 5.6e-09 65.1 168 31.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 9.6e-09 64.3 165 32.1
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 9.6e-09 64.3 165 30.3
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 1.3e-08 63.9 172 29.7
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.8e-08 62.8 165 30.3
BcaB04g19340 Brassica carinata HOM05D004244 ORTHO05D004964 4.8e-08 62.0 164 31.7
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 6.2e-08 61.6 167 32.9
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 6.2e-08 61.6 148 29.7
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 6.2e-08 61.6 160 30.0
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 8.1e-08 61.2 150 34.7
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 8.1e-08 61.2 168 29.8
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.1e-07 60.8 167 32.3
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.4e-07 60.5 150 34.7
A03p33580 Brassica napus HOM05D004244 ORTHO05D004964 1.8e-07 60.1 160 31.2
BraA03t12533Z Brassica rapa HOM05D004244 ORTHO05D004964 4.0e-07 58.9 162 32.7
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 9.0e-07 57.8 174 28.2
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 1.2e-06 57.4 171 35.7
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 2.6e-06 56.2 175 32.6
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 5.8e-06 55.1 168 28.6
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 5.8e-06 55.1 168 28.6
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 7.6e-06 54.7 133 30.8


User provided reference genes

Program Settings