Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006912 Chenopodium quinoa HOM05D001004 ORTHO05D000653 2.2e-47 191.8 88 100.0
AUR62006914 Chenopodium quinoa HOM05D008628 ORTHO05D010443 2.0e-16 89.0 83 48.2
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 4.5e-16 87.8 86 48.8
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 2.2e-15 85.5 86 47.7
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 1.9e-14 82.4 86 46.5
Thhalv10011055m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 4.2e-14 81.3 86 47.7
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 3.6e-13 78.2 86 46.5
AUR62006913 Chenopodium quinoa HOM05D001004 ORTHO05D000653 4.6e-13 77.8 89 41.6
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.9e-13 77.0 89 42.7
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 1.0e-12 76.6 86 45.3
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.4e-12 76.3 87 44.8
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 3.9e-12 74.7 87 46.0
AUR62000561 Chenopodium quinoa HOM05D001004 ORTHO05D000653 5.1e-12 74.3 120 34.2
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 8.8e-12 73.6 86 43.0
CARHR155530 Cardamine hirsuta HOM05D009680 ORTHO05D000653 8.8e-12 73.6 68 50.0
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 1.5e-11 72.8 81 44.4
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.5e-11 72.8 78 46.2
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 3.3e-11 71.6 87 43.7
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 4.3e-11 71.2 84 44.0
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.3e-11 71.2 89 41.6
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 4.3e-11 71.2 86 44.2
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 7.4e-11 70.5 77 45.5
Oeu017852.1 Olea europaea HOM05D001004 ORTHO05D000653 9.7e-11 70.1 86 39.5
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.3e-10 69.7 78 42.3
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 1.3e-10 69.7 77 42.9
Gohir.D05G283088 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.7e-10 69.3 77 44.2
Gorai.009G297200 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.7e-10 69.3 77 44.2
Gorai.009G297400 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.7e-10 69.3 77 44.2
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 2.2e-10 68.9 77 44.2
Gohir.A05G281700 Gossypium hirsutum HOM05D001004 ORTHO05D000653 2.2e-10 68.9 77 44.2
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 3.7e-10 68.2 85 44.7
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 1.1e-09 66.6 77 37.7
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.8e-09 65.9 78 39.7
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.8e-09 65.9 89 39.3
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 4.1e-09 64.7 90 42.2
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 5.3e-09 64.3 77 42.9
HPP92_016901 Vanilla planifolia HOM05D001004 ORTHO05D000653 6.9e-09 63.9 84 44.0
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.2e-08 63.2 86 41.9
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.2e-08 63.2 86 41.9
FvH4_1g16190 Fragaria vesca HOM05D001004 ORTHO05D000653 1.2e-08 63.2 88 37.5
Thhalv10011127m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 1.5e-08 62.8 67 43.3
FAN26G2526 Fragaria x ananassa HOM05D001004 ORTHO05D000653 1.5e-08 62.8 88 37.5
Gohir.A05G281850 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.5e-08 62.8 68 44.1
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 1.5e-08 62.8 90 41.1
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 2.0e-08 62.4 90 41.1
RcHm_v2.0_Chr6g0294471 Rosa chinensis HOM05D001004 ORTHO05D000653 3.4e-08 61.6 88 42.0
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.0e-07 60.1 88 45.5
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 2.2e-07 58.9 87 40.2
Atru.chr4.2206 Acer truncatum HOM05D001004 ORTHO05D000653 2.9e-07 58.5 68 42.6
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.9e-07 58.5 93 43.0
Lsat_1_v5_gn_0_14240 Lactuca sativa HOM05D001004 ORTHO05D000653 2.9e-07 58.5 88 40.9
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 2.9e-07 58.5 67 46.3
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.9e-07 58.5 69 44.9
CsaV3_2G017000 Cucumis sativus L. HOM05D001004 ORTHO05D000653 3.8e-07 58.2 62 48.4
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 3.8e-07 58.2 90 40.0
EL10Ac8g18696 Beta vulgaris HOM05D001004 ORTHO05D000653 5.0e-07 57.8 67 43.3
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.0e-07 57.8 77 35.1
FvH4_4g02870 Fragaria vesca HOM05D001004 ORTHO05D000653 5.0e-07 57.8 67 46.3
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 5.0e-07 57.8 64 46.9
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 5.0e-07 57.8 64 46.9
FAN12G4135 Fragaria x ananassa HOM05D001004 ORTHO05D000653 6.5e-07 57.4 66 45.5
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 6.5e-07 57.4 78 42.3
Lsat_1_v5_gn_1_35961 Lactuca sativa HOM05D001004 ORTHO05D000653 6.5e-07 57.4 88 40.9
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 6.5e-07 57.4 69 46.4
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 8.5e-07 57.0 69 46.4
Gohir.D11G134200 Gossypium hirsutum HOM05D001004 ORTHO05D000653 8.5e-07 57.0 67 46.3
Gorai.007G143500 Gossypium raimondii HOM05D001004 ORTHO05D000653 8.5e-07 57.0 67 46.3
GSVIVG01018137001 Vitis vinifera HOM05D001004 ORTHO05D000653 8.5e-07 57.0 67 41.8
Sp2g08390 Schrenkiella parvula HOM05D001004 ORTHO05D000653 1.1e-06 56.6 74 41.9
AUR62011910 Chenopodium quinoa HOM05D001004 ORTHO05D000653 1.4e-06 56.2 67 44.8
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.4e-06 56.2 94 40.4
Manes.05G086390 Manihot esculenta HOM05D001004 ORTHO05D000653 1.4e-06 56.2 69 43.5
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 1.4e-06 56.2 74 41.9
Nn3g18475 Nelumbo nucifera HOM05D001004 ORTHO05D000653 1.4e-06 56.2 58 46.6
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.4e-06 56.2 69 43.5
MELO3C020883.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.9e-06 55.8 69 43.5
MD13G1208500 Malus domestica HOM05D001004 ORTHO05D000653 2.5e-06 55.5 67 44.8
SEGI_07667 Sequoiadendron giganteum HOM05D001004 ORTHO05D000653 2.5e-06 55.5 67 43.3
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 2.5e-06 55.5 88 39.8
PGSC0003DMG400034659 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.5e-06 55.5 92 38.0
COL.COLO4_12161 Corchorus olitorius HOM05D001004 ORTHO05D000653 3.2e-06 55.1 59 45.8
Potri.010G075400 Populus trichocarpa HOM05D001004 ORTHO05D000653 3.2e-06 55.1 74 43.2
Potri.010G075600 Populus trichocarpa HOM05D001004 ORTHO05D000653 3.2e-06 55.1 74 44.6
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 3.2e-06 55.1 90 42.2
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 3.2e-06 55.1 88 39.8
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 3.2e-06 55.1 67 44.8
GSVIVG01018139001 Vitis vinifera HOM05D001004 ORTHO05D000653 3.2e-06 55.1 67 40.3
FAN12G3874 Fragaria x ananassa HOM05D001004 ORTHO05D000653 4.2e-06 54.7 70 38.6
Glyma.20G205800 Glycine max HOM05D001004 ORTHO05D000653 4.2e-06 54.7 67 44.8
HanXRQChr01g0007301 Helianthus annuus HOM05D001004 ORTHO05D000653 4.2e-06 54.7 67 41.8
HanXRQChr01g0007341 Helianthus annuus HOM05D001004 ORTHO05D000653 4.2e-06 54.7 67 41.8
Lsat_1_v5_gn_7_33200 Lactuca sativa HOM05D001004 ORTHO05D000653 4.2e-06 54.7 88 38.6
PSO170G3861 Papaver somniferum HOM05D001004 ORTHO05D000653 4.2e-06 54.7 76 42.1
RcHm_v2.0_Chr4g0390841 Rosa chinensis HOM05D001004 ORTHO05D000653 4.2e-06 54.7 67 43.3
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 5.5e-06 54.3 67 44.8
Gohir.A11G128400 Gossypium hirsutum HOM05D001004 ORTHO05D000653 5.5e-06 54.3 61 45.9
Manes.05G086408 Manihot esculenta HOM05D001004 ORTHO05D000653 5.5e-06 54.3 69 42.0
PSO210G2978 Papaver somniferum HOM05D001004 ORTHO05D000653 5.5e-06 54.3 73 42.5
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 5.5e-06 54.3 69 39.1
Prupe.1G032700 Prunus persica HOM05D001004 ORTHO05D000653 5.5e-06 54.3 67 40.3
Prupe.I000200 Prunus persica HOM05D001004 ORTHO05D000653 5.5e-06 54.3 67 44.8
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 5.5e-06 54.3 60 46.7
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 7.2e-06 53.9 66 43.9
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 7.2e-06 53.9 87 36.8
COL.COLO4_05579 Corchorus olitorius HOM05D001004 ORTHO05D000653 7.2e-06 53.9 67 43.3
FAN17G0323 Fragaria x ananassa HOM05D001004 ORTHO05D000653 7.2e-06 53.9 74 41.9
FAN17G0556 Fragaria x ananassa HOM05D001004 ORTHO05D000653 7.2e-06 53.9 74 41.9
FAN17G2832 Fragaria x ananassa HOM05D001004 ORTHO05D000653 7.2e-06 53.9 74 41.9
Sabra10G0033600 Salix brachista HOM05D001004 ORTHO05D000653 7.2e-06 53.9 74 41.9
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 9.4e-06 53.5 88 43.2
AUR62011909 Chenopodium quinoa HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 41.8
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 9.4e-06 53.5 79 36.7
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 9.4e-06 53.5 86 39.5
FvH4_4g02860 Fragaria vesca HOM05D001004 ORTHO05D000653 9.4e-06 53.5 65 44.6
FvH4_4g02930 Fragaria vesca HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 38.8
FAN12G2763 Fragaria x ananassa HOM05D001004 ORTHO05D000653 9.4e-06 53.5 65 44.6
FAN12G4224 Fragaria x ananassa HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 38.8
Glyma.10G184600 Glycine max HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 44.8
Glyma.10G184700 Glycine max HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 38.8
MBI04_g22609_MAGBIO Magnolia biondii HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 46.3
MD13G1208700 Malus domestica HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 40.3
PSO210G3122 Papaver somniferum HOM05D001004 ORTHO05D000653 9.4e-06 53.5 73 41.1
RcHm_v2.0_Chr4g0390971 Rosa chinensis HOM05D001004 ORTHO05D000653 9.4e-06 53.5 67 38.8


User provided reference genes

Program Settings