Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006873 Chenopodium quinoa HOM05D000823 ORTHO05D000088 3.0e-193 678.3 336 100.0
EL10Ac5g11929 Beta vulgaris HOM05D000823 ORTHO05D000088 2.9e-71 273.1 342 50.0
AUR62016265 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.4e-20 104.8 323 29.7
Medtr1g021400 Medicago truncatula HOM05D000823 ORTHO05D000088 1.1e-19 101.7 156 41.7
Hund17625 Selenicereus undatus HOM05D000823 ORTHO05D000088 2.0e-19 100.9 132 44.7
Ah.02g128420 Amaranthus hybridus HOM05D000823 ORTHO05D000088 3.3e-19 100.1 290 29.7
Ah.06g191720 Amaranthus hybridus HOM05D000823 ORTHO05D000088 5.7e-19 99.4 137 40.1
TPR.G15761 Trifolium pratense HOM05D000823 ORTHO05D000088 1.3e-18 98.2 249 32.1
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 1.7e-18 97.8 173 37.6
Manes.18G025570 Manihot esculenta HOM05D000823 ORTHO05D000088 2.2e-18 97.4 318 28.3
TPR.G13675 Trifolium pratense HOM05D000823 ORTHO05D000088 2.2e-18 97.4 169 37.3
Medtr1g021350 Medicago truncatula HOM05D000823 ORTHO05D000088 2.8e-18 97.1 131 42.7
Potri.002G129900 Populus trichocarpa HOM05D000823 ORTHO05D000088 3.7e-18 96.7 312 28.8
TPR.G15734 Trifolium pratense HOM05D000823 ORTHO05D000088 6.3e-18 95.9 142 40.8
Dinv39357 Davidia involucrata HOM05D000823 ORTHO05D000088 2.4e-17 94.0 293 29.7
Gohir.D05G201700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.4e-17 94.0 298 28.2
Gorai.009G207400 Gossypium raimondii HOM05D000823 ORTHO05D000088 2.4e-17 94.0 298 28.2
Cc10_g03670 Coffea canephora HOM05D000823 ORTHO05D000088 3.1e-17 93.6 303 28.1
Oeu028453.1 Olea europaea HOM05D000823 ORTHO05D000088 3.1e-17 93.6 258 31.8
Psat6g011640 Pisum sativum HOM05D000823 ORTHO05D000088 3.1e-17 93.6 177 36.7
TPR.G15760 Trifolium pratense HOM05D000823 ORTHO05D000088 4.1e-17 93.2 129 45.0
TPR.G15766 Trifolium pratense HOM05D000823 ORTHO05D000088 4.1e-17 93.2 175 36.6
TPR.G18789 Trifolium pratense HOM05D000823 ORTHO05D000088 4.1e-17 93.2 151 38.4
Medtr1g021330 Medicago truncatula HOM05D000823 ORTHO05D000088 7.0e-17 92.4 317 27.8
Hund19663 Selenicereus undatus HOM05D000823 ORTHO05D000088 7.0e-17 92.4 322 26.7
Potri.014G036900 Populus trichocarpa HOM05D000823 ORTHO05D000088 9.1e-17 92.0 318 27.7
Glyma.17G246000 Glycine max HOM05D000823 ORTHO05D000088 1.2e-16 91.7 133 42.1
Gohir.A05G199000 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.2e-16 91.7 288 29.9
Lj4A48T71 Lonicera japonica HOM05D000823 ORTHO05D000088 1.2e-16 91.7 286 31.1
Medtr1g021360 Medicago truncatula HOM05D000823 ORTHO05D000088 1.2e-16 91.7 178 34.3
Gohir.D01G106300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.5e-16 91.3 135 40.7
Gorai.002G130300 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.5e-16 91.3 135 40.7
Nitab4.5_0001014g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 2.6e-16 90.5 302 30.1
Medtr1g021435 Medicago truncatula HOM05D000823 ORTHO05D000088 3.5e-16 90.1 145 39.3
TPR.G15748 Trifolium pratense HOM05D000823 ORTHO05D000088 1.3e-15 88.2 173 34.1
Duzib093G1947 Durio zibethinus HOM05D000823 ORTHO05D000088 1.7e-15 87.8 131 42.0
Glyma.14G079100 Glycine max HOM05D000823 ORTHO05D000088 1.7e-15 87.8 134 41.8
Medtr1g021410 Medicago truncatula HOM05D000823 ORTHO05D000088 1.7e-15 87.8 297 29.0
Hund06888 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.7e-15 87.8 121 39.7
EL10Ac4g08957 Beta vulgaris HOM05D000823 ORTHO05D000088 2.2e-15 87.4 168 37.5
Cpa.g.sc64.15 Carica papaya HOM05D000823 ORTHO05D000088 2.9e-15 87.0 126 38.9
Medtr1g021290 Medicago truncatula HOM05D000823 ORTHO05D000088 2.9e-15 87.0 155 36.8
Cpa.g.sc64.16 Carica papaya HOM05D000823 ORTHO05D000088 3.8e-15 86.7 129 41.9
Psat6g011600 Pisum sativum HOM05D000823 ORTHO05D000088 3.8e-15 86.7 255 30.6
TWI56G0706 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 3.8e-15 86.7 186 34.9
AL7G18270 Arabidopsis lyrata HOM05D000823 ORTHO05D000088 5.0e-15 86.3 125 41.6
Eucgr.F00044 Eucalyptus grandis HOM05D000823 ORTHO05D000088 5.0e-15 86.3 297 27.9
Medtr1g021320 Medicago truncatula HOM05D000823 ORTHO05D000088 6.5e-15 85.9 174 33.9
Potri.002G129800 Populus trichocarpa HOM05D000823 ORTHO05D000088 6.5e-15 85.9 336 25.9
Sabra02G0101800 Salix brachista HOM05D000823 ORTHO05D000088 6.5e-15 85.9 330 25.5
CsaV3_2G028280 Cucumis sativus L. HOM05D000823 ORTHO05D000088 8.5e-15 85.5 126 42.1
Oeu028452.1 Olea europaea HOM05D000823 ORTHO05D000088 8.5e-15 85.5 249 30.9
Sed0025737 Sechium edule HOM05D000823 ORTHO05D000088 8.5e-15 85.5 297 30.3
Gohir.A01G117900 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.9e-14 84.3 304 26.6
Nn5g29400 Nelumbo nucifera HOM05D000823 ORTHO05D000088 2.5e-14 84.0 296 29.1
Lalb_Chr22g0355291 Lupinus albus HOM05D000823 ORTHO05D000088 3.2e-14 83.6 165 35.2
QL02p006488 Quercus lobata HOM05D000823 ORTHO05D000088 3.2e-14 83.6 287 30.0
AUR62008541 Chenopodium quinoa HOM05D000823 ORTHO05D000088 4.2e-14 83.2 307 27.7
EL10Ac6g14741 Beta vulgaris HOM05D000823 ORTHO05D000088 5.5e-14 82.8 131 38.9
CiPaw.16G051600 Carya illinoinensis HOM05D000823 ORTHO05D000088 7.2e-14 82.4 297 26.3
AUR62004797 Chenopodium quinoa HOM05D000823 ORTHO05D000088 7.2e-14 82.4 99 44.4
Lalb_Chr14g0368921 Lupinus albus HOM05D000823 ORTHO05D000088 7.2e-14 82.4 133 40.6
PGR042G1627 Punica granatum HOM05D000823 ORTHO05D000088 9.4e-14 82.0 124 41.9
Thecc.08G016900 Theobroma cacao HOM05D000823 ORTHO05D000088 1.2e-13 81.6 303 27.1
Lj5g0024307 Lotus japonicus HOM05D000823 ORTHO05D000088 1.6e-13 81.3 165 33.3
Sed0020190 Sechium edule HOM05D000823 ORTHO05D000088 1.6e-13 81.3 308 26.9
Atru.chr13.592 Acer truncatum HOM05D000823 ORTHO05D000088 2.7e-13 80.5 267 29.6
QL02p006459 Quercus lobata HOM05D000823 ORTHO05D000088 2.7e-13 80.5 282 28.0
Manes.18G025940 Manihot esculenta HOM05D000823 ORTHO05D000088 3.6e-13 80.1 141 35.5
TWI12G1175 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 3.6e-13 80.1 135 35.6
Sabra14G0026500 Salix brachista HOM05D000823 ORTHO05D000088 4.7e-13 79.7 274 29.9
Medtr1g021380 Medicago truncatula HOM05D000823 ORTHO05D000088 8.0e-13 79.0 285 28.8
Hund21798 Selenicereus undatus HOM05D000823 ORTHO05D000088 8.0e-13 79.0 269 30.1
Sc15g0006580 Simmondsia chinensis HOM05D000823 ORTHO05D000088 8.0e-13 79.0 262 29.4
AT4G33280 Arabidopsis thaliana HOM05D000823 ORTHO05D000088 1.4e-12 78.2 125 40.0
Oeu026134.1 Olea europaea HOM05D000823 ORTHO05D000088 1.4e-12 78.2 286 30.4
vmacro21581 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.4e-12 78.2 125 38.4
EL10Ac4g09636 Beta vulgaris HOM05D000823 ORTHO05D000088 1.8e-12 77.8 100 42.0
Nitab4.5_0000108g0220 Nicotiana tabacum HOM05D000823 ORTHO05D000088 2.3e-12 77.4 296 28.4
Ah.02g124430 Amaranthus hybridus HOM05D000823 ORTHO05D000088 3.9e-12 76.6 321 25.5
AUR62008538 Chenopodium quinoa HOM05D000823 ORTHO05D000088 5.2e-12 76.3 207 31.9
AUR62042926 Chenopodium quinoa HOM05D000395 ORTHO05D000088 5.2e-12 76.3 320 28.8
COL.COLO4_26423 Corchorus olitorius HOM05D000823 ORTHO05D000088 5.2e-12 76.3 310 25.5
Duzib041G0766 Durio zibethinus HOM05D000823 ORTHO05D000088 6.7e-12 75.9 296 27.7
THA.LOC104803688 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 1.1e-11 75.1 120 40.8
COL.COLO4_26417 Corchorus olitorius HOM05D000823 ORTHO05D000088 1.5e-11 74.7 104 41.3
MELO3C010905.2 Cucumis melo HOM05D000823 ORTHO05D000088 2.0e-11 74.3 308 30.2
AUR62004798 Chenopodium quinoa HOM05D000823 ORTHO05D000088 2.6e-11 73.9 203 30.0
arahy.Tifrunner.gnm1.ann1.NXSQ64 Arachis hypogaea HOM05D000823 ORTHO05D000088 3.3e-11 73.6 134 35.1
arahy.Tifrunner.gnm1.ann1.U5RNGH Arachis hypogaea HOM05D000823 ORTHO05D000088 3.3e-11 73.6 134 35.1
Phvul.001G018400 Phaseolus vulgaris HOM05D000823 ORTHO05D000088 3.3e-11 73.6 194 30.9
TWI36G1662 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 3.3e-11 73.6 138 34.1
THA.LOC104803689 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 4.4e-11 73.2 120 40.8
CAN.G371.89 Capsicum annuum HOM05D000823 ORTHO05D000088 5.7e-11 72.8 95 43.2
Duzib187G0271 Durio zibethinus HOM05D000823 ORTHO05D000088 5.7e-11 72.8 303 26.4
QL02p006454 Quercus lobata HOM05D000823 ORTHO05D000088 5.7e-11 72.8 257 28.8
AUR62016268 Chenopodium quinoa HOM05D000852 ORTHO05D000088 7.4e-11 72.4 94 39.4
AUR62000527 Chenopodium quinoa HOM05D000823 ORTHO05D000088 9.7e-11 72.0 257 28.0
AUR62016449 Chenopodium quinoa HOM05D000395 ORTHO05D000088 1.3e-10 71.6 315 27.9
Lalb_Chr24g0399131 Lupinus albus HOM05D000823 ORTHO05D000088 1.3e-10 71.6 151 34.4
Actinidia15278 Actinidia chinensis HOM05D000823 ORTHO05D000088 1.7e-10 71.2 260 27.3
AUR62003245 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.7e-10 71.2 136 34.6
Hund06887 Selenicereus undatus HOM05D000823 ORTHO05D000088 2.2e-10 70.9 244 25.0
VMungo0235G0001 Vigna mungo HOM05D000823 ORTHO05D000088 2.2e-10 70.9 91 46.2
EL10Ac7g17567 Beta vulgaris HOM05D000823 ORTHO05D000088 3.7e-10 70.1 134 32.1
EL10Ac4g08958 Beta vulgaris HOM05D000823 ORTHO05D000088 4.8e-10 69.7 215 28.4
PGR083G2634 Punica granatum HOM05D000823 ORTHO05D000088 4.8e-10 69.7 292 27.1
Thecc.01G046600 Theobroma cacao HOM05D000823 ORTHO05D000088 4.8e-10 69.7 323 26.6
HPP92_019639 Vanilla planifolia HOM05D000395 ORTHO05D000088 4.8e-10 69.7 129 38.8
COL.COLO4_26419 Corchorus olitorius HOM05D000823 ORTHO05D000088 6.3e-10 69.3 128 33.6
Rhsim06G0040900 Rhododendron simsii HOM05D000823 ORTHO05D000088 8.2e-10 68.9 249 28.5
Hund06886 Selenicereus undatus HOM05D000823 ORTHO05D000088 8.2e-10 68.9 81 43.2
vmacro21582 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 8.2e-10 68.9 93 41.9
AUR62021552 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.1e-09 68.6 290 26.9
AUR62021553 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.1e-09 68.6 247 27.5
Peaxi162Scf00392g00315 Petunia axillaris HOM05D000823 ORTHO05D000088 1.1e-09 68.6 251 28.7
Peaxi162Scf00535g00715 Petunia axillaris HOM05D000395 ORTHO05D000088 1.1e-09 68.6 289 30.1
CAN.G371.87 Capsicum annuum HOM05D000823 ORTHO05D000088 1.8e-09 67.8 91 42.9
Os03g0622100 Oryza sativa ssp. japonica HOM05D000823 ORTHO05D000088 1.8e-09 67.8 120 34.2
Peaxi162Scf00392g00316 Petunia axillaris HOM05D000823 ORTHO05D000088 1.8e-09 67.8 91 42.9
AUR62003315 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.4e-09 67.4 312 26.9
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 2.4e-09 67.4 129 33.3
Os03g0622200 Oryza sativa ssp. japonica HOM05D000823 ORTHO05D000088 3.1e-09 67.0 121 33.1
PSO017G5799 Papaver somniferum HOM05D000823 ORTHO05D000088 4.1e-09 66.6 75 46.7
EL10Ac6g14829 Beta vulgaris HOM05D000823 ORTHO05D000088 5.3e-09 66.2 124 36.3
COL.COLO4_26418 Corchorus olitorius HOM05D000823 ORTHO05D000088 7.0e-09 65.9 165 28.5
AUR62027225 Chenopodium quinoa HOM05D000823 ORTHO05D000088 9.1e-09 65.5 117 36.8
PSO063G5705 Papaver somniferum HOM05D000823 ORTHO05D000088 1.2e-08 65.1 113 36.3
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 1.2e-08 65.1 119 35.3
AUR62006874 Chenopodium quinoa HOM05D000823 ORTHO05D000088 2.0e-08 64.3 255 27.8
Ah.06g191730 Amaranthus hybridus HOM05D000823 ORTHO05D000088 2.6e-08 63.9 315 25.7
COL.COLO4_26420 Corchorus olitorius HOM05D000823 ORTHO05D000088 2.6e-08 63.9 317 24.6
ECA247G3085 Erigeron canadensis HOM05D000823 ORTHO05D000088 2.6e-08 63.9 90 38.9
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 2.6e-08 63.9 109 35.8
HPP92_015720 Vanilla planifolia HOM05D000395 ORTHO05D000088 2.6e-08 63.9 136 36.0
Gohir.D11G195101 Gossypium hirsutum HOM05D000823 ORTHO05D000088 3.5e-08 63.5 141 34.8
Lsat_1_v5_gn_1_19200 Lactuca sativa HOM05D000823 ORTHO05D000088 3.5e-08 63.5 105 38.1
Nn6g32138 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.7e-08 62.4 102 37.3
Gorai.007G208600 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.0e-07 62.0 271 26.6
EL10Ac4g08916 Beta vulgaris HOM05D000823 ORTHO05D000088 1.3e-07 61.6 110 32.7
MD04G1034500 Malus domestica HOM05D000823 ORTHO05D000088 1.3e-07 61.6 147 32.0
HPP92_026640 Vanilla planifolia HOM05D000395 ORTHO05D000088 1.3e-07 61.6 136 35.3
AUR62039041 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.7e-07 61.2 87 40.2
AUR62003317 Chenopodium quinoa HOM05D000823 ORTHO05D000088 2.2e-07 60.8 274 27.0
PSO455G0036 Papaver somniferum HOM05D000823 ORTHO05D000088 2.2e-07 60.8 122 30.3
HanXRQChr04g0104181 Helianthus annuus HOM05D000823 ORTHO05D000088 2.9e-07 60.5 158 31.0
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 2.9e-07 60.5 103 36.9
QL10p059777 Quercus lobata HOM05D000823 ORTHO05D000088 2.9e-07 60.5 65 49.2
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 3.8e-07 60.1 88 38.6
ATR0923G004 Amborella trichopoda HOM05D000823 ORTHO05D000088 5.0e-07 59.7 133 34.6
Gohir.A11G188600 Gossypium hirsutum HOM05D000823 ORTHO05D000088 5.0e-07 59.7 141 34.0
Nn8g40849 Nelumbo nucifera HOM05D000823 ORTHO05D000088 5.0e-07 59.7 109 35.8
Os12g0591500 Oryza sativa ssp. japonica HOM05D000395 ORTHO05D000088 5.0e-07 59.7 130 32.3
Peaxi162Scf00288g01211 Petunia axillaris HOM05D000823 ORTHO05D000088 5.0e-07 59.7 208 30.3
TPR.G13677 Trifolium pratense HOM05D000823 ORTHO05D000088 5.0e-07 59.7 72 45.8
Gohir.D02G093100 Gossypium hirsutum HOM05D000823 ORTHO05D000088 6.5e-07 59.3 88 38.6
Sp7g31020 Schrenkiella parvula HOM05D000823 ORTHO05D000088 6.5e-07 59.3 302 25.8
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 8.5e-07 58.9 101 37.6
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 8.5e-07 58.9 103 35.9
MBI16_g19885_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 1.1e-06 58.5 101 35.6
Migut.C00649 Erythranthe guttata HOM05D000823 ORTHO05D000088 1.5e-06 58.2 125 32.8
Hund08735 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.5e-06 58.2 100 34.0
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 1.5e-06 58.2 90 37.8
AUR62014922 Chenopodium quinoa HOM05D000823 ORTHO05D000088 1.9e-06 57.8 59 50.8
Prupe.4G206300 Prunus persica HOM05D000823 ORTHO05D000088 1.9e-06 57.8 100 40.0
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.9e-06 57.8 108 34.3
AUR62014923 Chenopodium quinoa HOM05D000823 ORTHO05D000004 2.5e-06 57.4 76 42.1
TPR.G11170 Trifolium pratense HOM05D000395 ORTHO05D000088 2.5e-06 57.4 106 34.9
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 3.2e-06 57.0 119 33.6
EL10Ac1g02025 Beta vulgaris HOM05D000823 ORTHO05D000088 4.2e-06 56.6 110 29.1
COL.COLO4_22200 Corchorus olitorius HOM05D000395 ORTHO05D000088 4.2e-06 56.6 115 33.0
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 4.2e-06 56.6 152 30.9
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 4.2e-06 56.6 168 28.6
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 4.2e-06 56.6 90 36.7
ATR0626G172 Amborella trichopoda HOM05D000823 ORTHO05D000088 5.5e-06 56.2 103 37.9
COL.COLO4_22193 Corchorus olitorius HOM05D000823 ORTHO05D000088 5.5e-06 56.2 162 29.0
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 7.2e-06 55.8 176 27.3
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 7.2e-06 55.8 100 35.0
SEGI_17947 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 7.2e-06 55.8 261 27.6
arahy.Tifrunner.gnm1.ann1.K3F6Y2 Arachis hypogaea HOM05D000823 ORTHO05D000088 9.4e-06 55.5 164 31.1
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 9.4e-06 55.5 103 31.1
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 9.4e-06 55.5 88 39.8
TAR381G0348 Trochodendron aralioides HOM05D000823 ORTHO05D000088 9.4e-06 55.5 117 33.3


User provided reference genes

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