Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 6.2e-61 237.3 120 100.0
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 9.7e-46 186.8 116 79.3
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 5.3e-44 181.0 107 83.2
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 1.3e-42 176.4 116 78.4
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.8e-39 163.7 118 69.5
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.6e-38 162.2 113 69.9
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.4e-38 161.4 118 67.8
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.3e-37 159.8 113 68.1
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.2e-37 159.1 113 71.7
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.8e-37 157.9 97 75.3
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 4.8e-37 157.9 96 75.0
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 6.3e-37 157.5 94 77.7
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-36 156.8 118 65.3
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.1e-36 156.8 113 69.9
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.1e-36 156.8 111 72.1
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.1e-36 156.8 113 68.1
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.4e-36 156.4 111 71.2
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.4e-36 156.4 105 72.4
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.8e-36 156.0 103 68.9
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.8e-36 156.0 117 66.7
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.8e-36 156.0 118 65.3
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.8e-36 156.0 113 69.0
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.4e-36 155.6 97 73.2
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.4e-36 155.6 97 73.2
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.4e-36 155.6 97 73.2
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 3.1e-36 155.2 97 73.2
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 3.1e-36 155.2 97 75.3
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 3.1e-36 155.2 109 68.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.1e-36 154.8 111 70.3
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 4.1e-36 154.8 113 65.5
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 5.3e-36 154.5 95 75.8
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 5.3e-36 154.5 113 68.1
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 5.3e-36 154.5 97 73.2
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 9.1e-36 153.7 116 66.4
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 9.1e-36 153.7 97 75.3
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.2e-35 153.3 113 67.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.2e-35 153.3 115 64.3
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.2e-35 153.3 118 66.1
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 1.2e-35 153.3 113 67.3
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.5e-35 152.9 94 77.7
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.5e-35 152.9 97 72.2
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.5e-35 152.9 97 72.2
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.5e-35 152.9 102 71.6
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.0e-35 152.5 97 71.1
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-35 152.5 97 72.2
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.0e-35 152.5 97 72.2
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 2.0e-35 152.5 118 66.9
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 2.0e-35 152.5 115 64.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-35 152.1 97 71.1
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-35 152.1 97 72.2
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.5e-35 151.8 112 67.0
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.5e-35 151.8 112 67.0
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 4.5e-35 151.4 97 72.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 4.5e-35 151.4 97 72.2
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 4.5e-35 151.4 117 65.0
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 5.9e-35 151.0 114 64.9
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 5.9e-35 151.0 113 71.7
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.0e-34 150.2 93 76.3
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.3e-34 149.8 81 92.6
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.3e-34 149.8 112 65.2
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.3e-34 149.8 96 71.9
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.3e-34 149.8 96 71.9
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.7e-34 149.4 103 67.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.7e-34 149.4 118 65.3
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.2e-34 149.1 118 62.7
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 2.2e-34 149.1 103 72.8
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.2e-34 149.1 118 64.4
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.2e-34 149.1 120 62.5
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.9e-34 148.7 122 63.9
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.8e-34 148.3 95 73.7
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 5.0e-34 147.9 90 76.7
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 5.0e-34 147.9 96 74.0
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 5.0e-34 147.9 106 66.0
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 6.5e-34 147.5 112 65.2
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.1e-33 146.7 87 77.0
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.4e-33 146.4 113 66.4
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 2.5e-33 145.6 87 77.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 5.5e-33 144.4 101 68.3
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 1.2e-32 143.3 116 63.8
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.6e-32 142.9 102 67.6
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 2.1e-32 142.5 89 73.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.7e-32 142.1 104 61.5
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.7e-32 141.4 108 64.8
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.7e-32 141.4 122 59.8
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 6.1e-32 141.0 118 58.5
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.0e-31 140.2 116 61.2
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 5.2e-31 137.9 77 83.1
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 8.8e-31 137.1 76 84.2
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 1.1e-30 136.7 93 71.0
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.0e-30 136.0 76 82.9
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 4.4e-30 134.8 76 78.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 4.8e-29 131.3 76 81.6
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.1e-28 130.2 90 70.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 5.3e-28 127.9 93 66.7
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.2e-27 126.7 104 64.4
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.5e-27 125.2 106 61.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.5e-27 124.8 97 61.9
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 2.1e-24 115.9 88 64.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.7e-24 115.5 100 61.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 6.7e-23 110.9 97 53.6
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 2.6e-22 109.0 124 45.2
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 3.7e-21 105.1 103 48.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 1.6e-19 99.8 89 52.8
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.0e-15 87.0 116 38.8
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.0e-15 87.0 55 74.5
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.8e-15 86.3 76 52.6
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.2e-11 73.6 92 43.5


User provided reference genes

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