Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 1.4e-33 145.6 67 100.0
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 1.9e-27 125.2 61 88.5
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 3.3e-27 124.4 66 83.3
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 3.6e-26 120.9 63 82.5
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 3.6e-26 120.9 65 83.1
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 1.8e-25 118.6 61 86.9
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 5.3e-25 117.1 61 85.2
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 6.9e-25 116.7 65 80.0
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.2e-24 115.9 67 76.1
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.2e-24 115.9 63 82.5
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.5e-24 115.5 61 83.6
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 2.6e-24 114.8 58 84.5
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 2.6e-24 114.8 61 83.6
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 3.4e-24 114.4 67 77.6
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 4.5e-24 114.0 58 86.2
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 4.5e-24 114.0 61 82.0
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 5.8e-24 113.6 63 77.8
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 5.8e-24 113.6 67 76.1
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 7.6e-24 113.2 65 78.5
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 7.6e-24 113.2 65 78.5
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 7.6e-24 113.2 65 80.0
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 7.6e-24 113.2 64 79.7
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 7.6e-24 113.2 64 82.8
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 7.6e-24 113.2 64 82.8
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 9.9e-24 112.8 58 84.5
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 9.9e-24 112.8 58 84.5
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 9.9e-24 112.8 59 86.4
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 9.9e-24 112.8 58 84.5
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.3e-23 112.5 61 82.0
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.3e-23 112.5 61 82.0
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 58 84.5
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 2.2e-23 111.7 65 78.5
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 84.5
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 82.8
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 82.8
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 2.2e-23 111.7 58 82.8
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 2.9e-23 111.3 57 86.0
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 2.9e-23 111.3 61 80.3
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 3.8e-23 110.9 58 82.8
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 4.9e-23 110.5 58 81.0
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.9e-23 110.5 58 81.0
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 4.9e-23 110.5 63 77.8
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 6.4e-23 110.2 58 84.5
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 6.4e-23 110.2 61 78.7
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 6.4e-23 110.2 57 84.2
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 8.4e-23 109.8 58 82.8
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 8.4e-23 109.8 58 82.8
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 8.4e-23 109.8 59 81.4
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 8.4e-23 109.8 58 82.8
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.1e-22 109.4 59 81.4
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 59 81.4
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 1.9e-22 108.6 61 77.0
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.9e-22 108.6 62 77.4
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 1.9e-22 108.6 54 87.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 2.4e-22 108.2 63 76.2
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 2.4e-22 108.2 55 87.3
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 3.2e-22 107.8 67 73.1
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 5.4e-22 107.1 58 79.3
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 9.3e-22 106.3 58 81.0
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 9.3e-22 106.3 56 83.9
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.2e-21 105.9 58 81.0
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-21 105.1 65 73.8
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 2.1e-21 105.1 65 73.8
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.1e-21 105.1 58 81.0
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 6.0e-21 103.6 58 79.3
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 6.0e-21 103.6 56 83.9
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.8e-20 102.1 54 83.3
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 2.3e-20 101.7 63 69.8
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 6.7e-20 100.1 63 71.4
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 3.3e-19 97.8 63 69.8
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 4.3e-19 97.4 54 81.5
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 1.4e-17 92.4 63 66.7
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 1.5e-16 89.0 58 67.2
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 9.9e-16 86.3 58 65.5
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 8.4e-15 83.2 58 67.2
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 8.4e-15 83.2 63 63.5
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 4.2e-14 80.9 63 63.5
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.1e-13 78.6 44 77.3
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 1.0e-12 76.3 47 74.5
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 4.3e-11 70.9 36 86.1
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 4.3e-11 70.9 40 75.0
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.6e-11 70.5 36 91.7
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.6e-11 70.5 36 88.9
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 5.6e-11 70.5 36 91.7
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 4.0e-09 64.3 54 51.9
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 5.3e-09 63.9 52 48.1
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 5.3e-09 63.9 52 48.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 6.9e-09 63.5 38 73.7
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 2.6e-08 61.6 53 50.9
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 4.5e-08 60.8 41 61.0


User provided reference genes

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