Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 4.3e-107 391.3 198 100.0
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.1e-100 367.9 199 94.0
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.7e-63 246.5 194 63.4
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 8.2e-58 227.6 192 60.4
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.2e-58 227.6 192 60.4
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-57 226.5 192 59.9
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 6.9e-57 224.6 195 57.4
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-56 222.2 192 59.9
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-56 222.2 190 59.5
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.3e-55 220.3 192 56.8
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.2e-55 219.5 195 55.4
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 3.8e-55 218.8 195 55.4
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 6.5e-55 218.0 157 72.6
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.9e-54 216.5 192 57.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 2.5e-54 216.1 192 55.7
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.5e-54 216.1 192 57.8
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 4.2e-54 215.3 194 57.2
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 9.3e-54 214.2 194 56.7
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 9.3e-54 214.2 192 55.2
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.2e-53 213.8 193 58.5
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.7e-53 212.6 193 58.0
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 3.5e-53 212.2 201 53.2
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 6.1e-53 211.5 192 54.2
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 7.9e-53 211.1 202 52.5
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.0e-52 210.7 194 55.2
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.3e-52 209.5 195 51.8
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 3.0e-52 209.1 185 55.1
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 6.7e-52 208.0 195 52.8
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 8.7e-52 207.6 194 54.1
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.9e-51 206.5 201 52.7
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.3e-51 205.7 194 52.1
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 4.3e-51 205.3 205 50.2
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 4.3e-51 205.3 195 54.4
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 4.3e-51 205.3 201 52.2
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 4.3e-51 205.3 194 52.1
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.3e-50 203.8 195 52.3
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.3e-50 203.8 202 50.5
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 3.7e-50 202.2 175 54.3
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 3.7e-50 202.2 195 51.8
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 4.8e-50 201.8 204 51.5
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 6.3e-50 201.4 178 52.2
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 6.3e-50 201.4 188 53.2
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 6.3e-50 201.4 195 51.8
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 8.2e-50 201.1 194 50.5
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.1e-49 200.7 192 54.2
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.4e-49 199.5 192 54.7
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.1e-49 199.1 202 49.0
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 3.1e-49 199.1 202 51.5
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 1.5e-48 196.8 195 51.8
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 2.0e-48 196.4 200 50.0
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 4.5e-48 195.3 192 51.0
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 4.5e-48 195.3 195 51.3
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 4.5e-48 195.3 192 52.1
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 4.5e-48 195.3 195 49.2
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 5.9e-48 194.9 192 51.0
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 5.9e-48 194.9 195 50.8
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 1.0e-47 194.1 193 50.3
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.0e-47 194.1 185 51.4
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.3e-47 193.7 195 51.3
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.7e-47 193.4 195 49.2
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.7e-47 193.4 195 52.3
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 2.9e-47 192.6 192 50.0
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 5.0e-47 191.8 193 49.2
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 5.0e-47 191.8 192 50.0
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 6.5e-47 191.4 192 50.0
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 6.5e-47 191.4 195 50.3
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 8.5e-47 191.0 195 50.3
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 1.1e-46 190.7 195 49.7
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 1.1e-46 190.7 195 51.3
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.1e-46 190.7 195 51.3
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.9e-46 189.9 192 50.0
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.9e-46 189.9 192 50.0
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 1.9e-46 189.9 192 50.0
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 1.9e-46 189.9 192 49.0
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.5e-46 189.5 192 49.5
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 3.2e-46 189.1 192 49.0
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 3.2e-46 189.1 192 49.5
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.2e-45 187.2 195 49.2
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 1.6e-45 186.8 193 49.7
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 2.7e-45 186.0 195 48.7
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 3.6e-45 185.7 192 49.0
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 6.1e-45 184.9 195 49.7
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 7.9e-45 184.5 191 48.7
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 7.9e-45 184.5 195 48.2
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 3.0e-44 182.6 195 48.2
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.9e-44 182.2 174 52.3
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.1e-41 174.1 235 43.4
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 9.4e-38 161.0 185 43.8
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.1e-37 158.3 154 55.8
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 2.6e-35 152.9 136 52.9
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.7e-34 150.2 147 49.0
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.7e-34 150.2 203 41.9
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 4.1e-33 145.6 154 49.4
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 7.0e-33 144.8 144 49.3
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 9.1e-33 144.4 217 38.7
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 7.7e-32 141.4 77 83.1
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 3.8e-31 139.0 153 47.1
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 4.7e-29 132.1 181 38.1
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 8.0e-29 131.3 126 50.0
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 2.8e-26 122.9 76 68.4
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.8e-26 122.1 85 57.6
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 6.3e-26 121.7 102 59.8
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 4.1e-25 119.0 79 62.0
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.0e-24 116.7 71 69.0
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 2.0e-24 116.7 85 56.5
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 2.2e-23 113.2 85 54.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 8.0e-21 104.8 100 53.0
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 7.5e-19 98.2 101 53.5
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 3.7e-18 95.9 114 45.6
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.0e-15 87.8 101 46.5
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 5.4e-09 65.5 42 66.7
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 2.7e-08 63.2 40 67.5
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 4.5e-08 62.4 55 58.2
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 2.3e-07 60.1 43 55.8


User provided reference genes

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