Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006246 Chenopodium quinoa HOM05D003709 ORTHO05D004364 2.3e-91 339.0 179 100.0
AUR62028486 Chenopodium quinoa HOM05D003709 ORTHO05D004364 1.2e-55 220.3 116 98.3
EL10Ac7g16841 Beta vulgaris HOM05D003709 ORTHO05D004364 2.7e-44 182.6 114 82.5
EL10Ac7g16842 Beta vulgaris HOM05D003709 ORTHO05D004364 2.7e-44 182.6 114 82.5
Ah.15g090600 Amaranthus hybridus HOM05D003709 ORTHO05D004364 2.2e-41 172.9 115 77.4
Aqoxy4G02712 Aquilegia oxysepala HOM05D003709 ORTHO05D004364 5.9e-39 164.9 113 77.0
Oeu007203.1 Olea europaea HOM05D003709 ORTHO05D004364 1.3e-38 163.7 114 76.3
vmacro07432 Vaccinium macrocarpon HOM05D003709 ORTHO05D004364 1.7e-38 163.3 117 74.4
DCAR_020733 Daucus carota HOM05D003709 ORTHO05D004364 3.8e-38 162.2 116 75.9
Dinv31727 Davidia involucrata HOM05D003709 ORTHO05D004364 3.8e-38 162.2 116 75.0
Prupe.8G077900 Prunus persica HOM05D003709 ORTHO05D004364 5.0e-38 161.8 115 75.7
Cpa.g.c29173.2 Carica papaya HOM05D003709 ORTHO05D004364 1.1e-37 160.6 115 73.0
Nn6g34801 Nelumbo nucifera HOM05D003709 ORTHO05D004364 1.9e-37 159.8 116 69.8
Hma1.2p1_0245F.1_g101590 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 2.5e-37 159.5 115 77.4
CAN.G841.14 Capsicum annuum HOM05D003709 ORTHO05D004364 3.2e-37 159.1 119 73.9
ClCG03G000710 Citrullus lanatus HOM05D003709 ORTHO05D004364 3.2e-37 159.1 111 75.7
Cc06_g06250 Coffea canephora HOM05D003709 ORTHO05D004364 3.2e-37 159.1 117 73.5
GSVIVG01033901001 Vitis vinifera HOM05D003709 ORTHO05D004364 4.2e-37 158.7 117 71.8
Lj1C125T5 Lonicera japonica HOM05D003709 ORTHO05D004364 5.5e-37 158.3 117 76.1
Solyc10g083220.3 Solanum lycopersicum HOM05D003709 ORTHO05D004364 9.4e-37 157.5 119 72.3
THA.LOC104803461 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 1.6e-36 156.8 114 74.6
THA.LOC104826817 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 1.6e-36 156.8 114 74.6
FAN20G0151 Fragaria x ananassa HOM05D003709 ORTHO05D004364 2.1e-36 156.4 115 73.0
PGSC0003DMG400028247 Solanum tuberosum HOM05D003709 ORTHO05D004364 2.1e-36 156.4 127 70.1
FvH4_2g10910 Fragaria vesca HOM05D003709 ORTHO05D004364 2.7e-36 156.0 115 73.0
FAN24G0281 Fragaria x ananassa HOM05D003709 ORTHO05D004364 2.7e-36 156.0 115 73.0
Nitab4.5_0001801g0070 Nicotiana tabacum HOM05D003709 ORTHO05D004364 2.7e-36 156.0 124 71.0
CSS0033506 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 3.6e-36 155.6 116 73.3
MELO3C009499.2 Cucumis melo HOM05D003709 ORTHO05D004364 3.6e-36 155.6 111 73.9
FAN27G1255 Fragaria x ananassa HOM05D003709 ORTHO05D004364 3.6e-36 155.6 115 73.0
MD10G1058500 Malus domestica HOM05D003709 ORTHO05D004364 3.6e-36 155.6 114 72.8
Manes.08G029100 Manihot esculenta HOM05D003709 ORTHO05D004364 3.6e-36 155.6 117 71.8
PGR004G2656 Punica granatum HOM05D003709 ORTHO05D004364 3.6e-36 155.6 116 71.6
CSS0019397 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 4.7e-36 155.2 116 73.3
FAN15G3210 Fragaria x ananassa HOM05D003709 ORTHO05D004364 6.1e-36 154.8 115 72.2
Gohir.D09G133000 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.1e-36 154.8 116 71.6
Sopen10g032700 Solanum pennellii HOM05D003709 ORTHO05D004364 6.1e-36 154.8 122 70.5
Actinidia12698 Actinidia chinensis HOM05D003709 ORTHO05D004364 1.0e-35 154.1 116 70.7
Actinidia18412 Actinidia chinensis HOM05D003709 ORTHO05D004364 1.0e-35 154.1 116 70.7
CsaV3_3G037560 Cucumis sativus L. HOM05D003709 ORTHO05D004364 1.0e-35 154.1 111 74.8
Gohir.A09G141700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.0e-35 154.1 116 71.6
PSO357G0160 Papaver somniferum HOM05D003709 ORTHO05D004364 1.0e-35 154.1 116 71.6
Gorai.006G152500 Gossypium raimondii HOM05D003709 ORTHO05D004364 1.4e-35 153.7 116 70.7
Peaxi162Scf00096g00098 Petunia axillaris HOM05D003709 ORTHO05D004364 1.4e-35 153.7 121 71.9
Thecc.05G096700 Theobroma cacao HOM05D003709 ORTHO05D004364 1.4e-35 153.7 116 72.4
Ca_09030_v3 Cicer arietinum L. HOM05D003709 ORTHO05D004364 1.8e-35 153.3 115 68.7
Duzib093G0911 Durio zibethinus HOM05D003709 ORTHO05D004364 1.8e-35 153.3 115 70.4
CSS0048031 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 2.3e-35 152.9 116 72.4
Lalb_Chr20g0111541 Lupinus albus HOM05D003709 ORTHO05D004364 2.3e-35 152.9 115 70.4
MD05G1051100 Malus domestica HOM05D003709 ORTHO05D004364 2.3e-35 152.9 114 71.9
Sed0021250 Sechium edule HOM05D003709 ORTHO05D004364 3.9e-35 152.1 114 71.9
TWI77G0334 Tripterygium wilfordii HOM05D003709 ORTHO05D004364 3.9e-35 152.1 116 66.4
Eucgr.A02626 Eucalyptus grandis HOM05D003709 ORTHO05D004364 5.1e-35 151.8 116 70.7
PSO339G2742 Papaver somniferum HOM05D003709 ORTHO05D004364 5.1e-35 151.8 117 70.9
Actinidia05396 Actinidia chinensis HOM05D003709 ORTHO05D004364 6.7e-35 151.4 116 69.8
ECA247G0210 Erigeron canadensis HOM05D003709 ORTHO05D004364 6.7e-35 151.4 116 69.0
HanXRQChr04g0114081 Helianthus annuus HOM05D003709 ORTHO05D004364 6.7e-35 151.4 116 70.7
Lj2g0024912 Lotus japonicus HOM05D003709 ORTHO05D004364 6.7e-35 151.4 116 69.8
MBI17_g01496_MAGBIO Magnolia biondii HOM05D003709 ORTHO05D004364 6.7e-35 151.4 115 70.4
QL07p038048 Quercus lobata HOM05D003709 ORTHO05D004364 6.7e-35 151.4 119 69.7
HanXRQChr08g0228531 Helianthus annuus HOM05D003709 ORTHO05D004364 1.1e-34 150.6 140 61.4
Psat3g030960 Pisum sativum HOM05D003709 ORTHO05D004364 1.5e-34 150.2 96 79.2
CANSAT64G1889 Cannabis sativa HOM05D003709 ORTHO05D004364 2.0e-34 149.8 115 73.0
Phvul.001G193000 Phaseolus vulgaris HOM05D003709 ORTHO05D004364 2.0e-34 149.8 117 70.1
A10p30240 Brassica napus HOM05D003709 ORTHO05D004364 2.6e-34 149.4 117 70.9
BraA10t45062Z Brassica rapa HOM05D003709 ORTHO05D004364 2.6e-34 149.4 117 70.9
Lsat_1_v5_gn_9_14520 Lactuca sativa HOM05D003709 ORTHO05D004364 2.6e-34 149.4 103 76.7
VMungo1383G1751 Vigna mungo HOM05D003709 ORTHO05D004364 2.6e-34 149.4 129 65.9
BcaC06g32330 Brassica carinata HOM05D003709 ORTHO05D004364 3.3e-34 149.1 117 70.9
BcaC06g32333 Brassica carinata HOM05D003709 ORTHO05D004364 3.3e-34 149.1 117 70.9
C09p70650 Brassica napus HOM05D003709 ORTHO05D004364 3.3e-34 149.1 117 70.9
BolC9t59821H Brassica oleracea HOM05D003709 ORTHO05D004364 3.3e-34 149.1 117 70.9
Ciclev10013818m.g Citrus clementina HOM05D003709 ORTHO05D004364 3.3e-34 149.1 116 68.1
Gorai.007G357100 Gossypium raimondii HOM05D003709 ORTHO05D004364 3.3e-34 149.1 116 67.2
Migut.J00663 Erythranthe guttata HOM05D003709 ORTHO05D004364 4.4e-34 148.7 112 67.0
Thhalv10014881m.g Eutrema salsugineum HOM05D003709 ORTHO05D004364 4.4e-34 148.7 113 70.8
Gorai.004G000400 Gossypium raimondii HOM05D003709 ORTHO05D004364 4.4e-34 148.7 116 69.0
Glyma.19G196500 Glycine max HOM05D003709 ORTHO05D004364 5.7e-34 148.3 116 69.0
MSTRG.5871 Avicennia marina HOM05D003709 ORTHO05D004364 7.4e-34 147.9 116 67.2
CARHR206940 Cardamine hirsuta HOM05D003709 ORTHO05D004364 7.4e-34 147.9 116 69.8
Atru.chr8.1435 Acer truncatum HOM05D003709 ORTHO05D004364 9.7e-34 147.5 114 71.1
Glyma.03G198800 Glycine max HOM05D003709 ORTHO05D004364 9.7e-34 147.5 128 64.8
BcaB01g05734 Brassica carinata HOM05D003709 ORTHO05D004364 1.7e-33 146.7 117 70.1
Sp6g36640 Schrenkiella parvula HOM05D003709 ORTHO05D004364 1.7e-33 146.7 114 70.2
HPP92_028584 Vanilla planifolia HOM05D003709 ORTHO05D004364 1.7e-33 146.7 115 64.3
Ciclev10012932m.g Citrus clementina HOM05D003709 ORTHO05D004364 2.2e-33 146.4 116 66.4
Medtr7g105350 Medicago truncatula HOM05D003709 ORTHO05D004364 2.2e-33 146.4 115 67.0
Carub.0006s0511 Capsella rubella HOM05D003709 ORTHO05D004364 2.8e-33 146.0 114 70.2
A03p02630 Brassica napus HOM05D003709 ORTHO05D004364 3.7e-33 145.6 117 69.2
BraA03t09624Z Brassica rapa HOM05D003709 ORTHO05D004364 3.7e-33 145.6 117 69.2
AL6G16240 Arabidopsis lyrata HOM05D003709 ORTHO05D004364 4.8e-33 145.2 113 69.9
Haze_19671 Corylus avellana HOM05D003709 ORTHO05D004364 6.3e-33 144.8 112 70.5
Potri.016G074700 Populus trichocarpa HOM05D003709 ORTHO05D004364 6.3e-33 144.8 115 65.2
Nitab4.5_0005187g0010 Nicotiana tabacum HOM05D003709 ORTHO05D004364 8.2e-33 144.4 125 68.8
AT5G06240 Arabidopsis thaliana HOM05D003709 ORTHO05D004364 1.1e-32 144.1 114 69.3
Rhsim03G0069600 Rhododendron simsii HOM05D003709 ORTHO05D004364 1.1e-32 144.1 155 55.5
TPR.G23331 Trifolium pratense HOM05D003709 ORTHO05D004364 2.4e-32 142.9 116 65.5
CDE04G0652 Ceratophyllum demersum HOM05D003709 ORTHO05D004364 4.1e-32 142.1 116 65.5
Gohir.A01G177700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.1e-32 142.1 115 66.1
Sabra16G0080200 Salix brachista HOM05D003709 ORTHO05D004364 4.1e-32 142.1 113 63.7
TAR623G0195 Trochodendron aralioides HOM05D003709 ORTHO05D004364 5.3e-32 141.7 106 73.6
RcHm_v2.0_Chr6g0269071 Rosa chinensis HOM05D003709 ORTHO05D004364 1.2e-31 140.6 93 77.4
Gohir.A10G101550 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.5e-31 140.2 115 66.1
Gohir.A04G147400 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.0e-30 137.5 92 77.2
BcaB01g05985 Brassica carinata HOM05D003709 ORTHO05D004364 1.3e-30 137.1 137 60.6
Hma1.2p1_1724F.1_g299425 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 1.7e-30 136.7 91 79.1
arahy.Tifrunner.gnm1.ann1.VRIY4R Arachis hypogaea HOM05D003709 ORTHO05D004364 2.9e-30 136.0 96 72.9
CiPaw.10G014600 Carya illinoinensis HOM05D003709 ORTHO05D004364 2.9e-30 136.0 90 81.1
Gohir.A13G235900 Gossypium hirsutum HOM05D003709 ORTHO05D004364 3.8e-30 135.6 95 73.7
Aa31sc52G10 Aethionema arabicum HOM05D003709 ORTHO05D004364 5.0e-30 135.2 114 64.0
Sabra06G0074500 Salix brachista HOM05D003709 ORTHO05D004364 5.0e-30 135.2 115 61.7
arahy.Tifrunner.gnm1.ann1.K65CIQ Arachis hypogaea HOM05D003709 ORTHO05D004364 6.5e-30 134.8 96 72.9
Gohir.A13G149700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.5e-30 134.8 123 61.8
Aa31LG11G7240 Aethionema arabicum HOM05D003709 ORTHO05D004364 1.5e-29 133.7 104 65.4
SGA_v2.0_scaffold13G06687 Striga asiatica HOM05D003709 ORTHO05D004364 5.5e-29 131.7 115 66.1
Gorai.002G197000 Gossypium raimondii HOM05D003709 ORTHO05D004364 3.0e-27 125.9 103 68.0
Hma1.2p1_2017F.1_g311180 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 1.5e-26 123.6 155 51.0
unitig_744.g24704 Utricularia gibba HOM05D003709 ORTHO05D004364 1.5e-26 123.6 142 50.7
Zm00001eb266720 Zea mays HOM05D003709 ORTHO05D004364 4.4e-26 122.1 111 59.5
Dinv21156 Davidia involucrata HOM05D003709 ORTHO05D004364 5.7e-26 121.7 106 66.0
Haze_19660 Corylus avellana HOM05D003709 ORTHO05D004364 4.8e-25 118.6 142 54.2
Gorai.012G000500 Gossypium raimondii HOM05D003709 ORTHO05D004364 6.3e-25 118.2 143 51.7
ATR0315G087 Amborella trichopoda HOM05D003709 ORTHO05D004364 5.3e-24 115.2 94 66.0
Hund28303 Selenicereus undatus HOM05D003709 ORTHO05D004364 2.9e-22 109.4 106 60.4
Os05g0112750 Oryza sativa ssp. japonica HOM05D003709 ORTHO05D004364 8.5e-22 107.8 114 48.2
Hund28305 Selenicereus undatus HOM05D003709 ORTHO05D004364 1.2e-20 104.0 105 57.1
AUR62028484 Chenopodium quinoa HOM05D003709 ORTHO05D138253 4.7e-20 102.1 53 96.2
AUR62028485 Chenopodium quinoa HOM05D003709 ORTHO05D004364 4.7e-20 102.1 53 96.2
Manes.09G051450 Manihot esculenta HOM05D003709 ORTHO05D004364 4.0e-19 99.0 80 68.8
Gohir.D02G000500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.0e-18 96.7 118 49.2
Gohir.A12G074200 Gossypium hirsutum HOM05D003709 ORTHO05D004364 9.8e-18 94.4 116 50.0
Peaxi162Scf00013g00154 Petunia axillaris HOM05D003709 ORTHO05D004364 9.8e-18 94.4 109 51.4
Gohir.A09G000259 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.2e-17 93.2 67 70.1
Gohir.D04G000040 Gossypium hirsutum HOM05D003709 ORTHO05D004364 3.7e-17 92.4 131 45.8
COL.COLO4_29661 Corchorus olitorius HOM05D003709 ORTHO05D004364 1.1e-16 90.9 63 74.6
Gorai.006G066600 Gossypium raimondii HOM05D003709 ORTHO05D004364 1.1e-16 90.9 63 71.4
Gohir.D01G158750 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.6e-15 87.0 102 50.0
Pp3c3_9770 Physcomitrium patens HOM05D003709 ORTHO05D004364 2.7e-15 86.3 104 45.2
AagrBONN_evm.TU.Sc2ySwM_228.2513 Anthoceros agrestis HOM05D003709 ORTHO05D004364 1.7e-14 83.6 157 36.3
Nn2g14234 Nelumbo nucifera HOM05D003709 ORTHO05D004364 5.0e-14 82.0 80 58.8
C03p03020 Brassica napus HOM05D003709 ORTHO05D004364 1.1e-13 80.9 65 70.8
Gohir.D02G000150 Gossypium hirsutum HOM05D003709 ORTHO05D004364 3.2e-13 79.3 77 57.1
Lalb_Chr25g0288191 Lupinus albus HOM05D003709 ORTHO05D004364 3.6e-12 75.9 55 67.3
CBR_g45657 Chara braunii HOM05D003709 ORTHO05D004364 4.7e-12 75.5 103 41.7
Gohir.A03G211700 Gossypium hirsutum HOM05D001759 ORTHO05D004364 8.0e-12 74.7 41 85.4
Gohir.A06G142750 Gossypium hirsutum HOM05D003709 ORTHO05D004364 8.0e-12 74.7 52 73.1
Lalb_Chr25g0288201 Lupinus albus HOM05D003709 ORTHO05D004364 1.0e-11 74.3 68 61.8
MD13G1200900 Malus domestica HOM05D003709 ORTHO05D004364 1.4e-11 73.9 54 70.4
Gohir.A01G093450 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.3e-11 73.2 55 67.3
Gohir.A01G093475 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.3e-11 73.2 55 67.3
Mapoly0009s0017 Marchantia polymorpha HOM05D003709 ORTHO05D004364 2.3e-11 73.2 97 45.4
COL.COLO4_29662 Corchorus olitorius HOM05D003709 ORTHO05D004364 6.8e-11 71.6 54 68.5
MD07G1268900 Malus domestica HOM05D003709 ORTHO05D004364 1.2e-10 70.9 54 70.4
TAR636G0224 Trochodendron aralioides HOM05D003709 ORTHO05D004364 1.2e-10 70.9 139 38.8
Sc20g0006470 Simmondsia chinensis HOM05D003709 ORTHO05D004364 2.0e-10 70.1 65 61.5
Actinidia27230 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.4e-10 68.9 54 64.8
Actinidia28628 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.4e-10 68.9 54 64.8
Actinidia37294 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.4e-10 68.9 54 64.8
Haze_10129 Corylus avellana HOM05D003709 ORTHO05D004364 4.4e-10 68.9 61 65.6
Gohir.A05G416901 Gossypium hirsutum HOM05D001765 ORTHO05D003527 5.7e-10 68.6 85 50.6
Gohir.A05G416501 Gossypium hirsutum HOM05D001765 ORTHO05D003527 7.5e-10 68.2 85 50.6
Haze_00443 Corylus avellana HOM05D000273 ORTHO05D000198 2.2e-09 66.6 59 62.7
Gohir.D11G326500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.3e-09 65.1 56 60.7
Haze_09934 Corylus avellana HOM05D003709 ORTHO05D004364 8.3e-09 64.7 59 57.6
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 8.3e-09 64.7 40 75.0
Gohir.A11G282813 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.4e-08 63.9 37 83.8
Potri.006G208200 Populus trichocarpa HOM05D003709 ORTHO05D004364 1.4e-08 63.9 47 68.1
SGA_v2.0_scaffold123G33400 Striga asiatica HOM05D003709 ORTHO05D004364 1.4e-08 63.9 35 94.3
arahy.Tifrunner.gnm1.ann1.PZI97L Arachis hypogaea HOM05D003709 ORTHO05D004364 2.4e-08 63.2 57 57.9
Gorai.007G188700 Gossypium raimondii HOM05D003709 ORTHO05D004364 3.1e-08 62.8 33 84.8
SMO197G0068 Selaginella moellendorffii HOM05D003709 ORTHO05D004364 5.4e-08 62.0 101 36.6
Gohir.1Z049729 Gossypium hirsutum HOM05D003709 ORTHO05D004364 9.1e-08 61.2 33 84.8
Gohir.D04G000065 Gossypium hirsutum HOM05D003709 ORTHO05D004364 9.1e-08 61.2 33 84.8
Gohir.1Z049623 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.0e-07 60.1 35 80.0
Gohir.A12G001133 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.7e-07 59.7 42 71.4
Sabra16G0077300 Salix brachista HOM05D003709 ORTHO05D004364 3.5e-07 59.3 53 56.6
ClCG10G018670 Citrullus lanatus HOM05D003709 ORTHO05D004364 5.9e-07 58.5 29 93.1


User provided reference genes

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