Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006232 Chenopodium quinoa HOM05D000018 ORTHO05D137968 3.9e-44 181.0 89 100.0
AUR62036978 Chenopodium quinoa HOM05D000018 ORTHO05D001040 6.3e-34 147.1 86 84.9
EL10Ac7g16865 Beta vulgaris HOM05D000018 ORTHO05D001040 1.6e-21 105.9 67 74.6
EL10Ac7g16911 Beta vulgaris HOM05D000018 ORTHO05D001040 6.1e-21 104.0 76 69.7
EL10Ac7g16863 Beta vulgaris HOM05D000018 ORTHO05D001040 5.7e-19 97.4 76 69.7
AUR62006234 Chenopodium quinoa HOM05D000018 ORTHO05D001040 7.7e-16 87.0 67 65.7
AUR62022304 Chenopodium quinoa HOM05D000018 ORTHO05D001040 7.7e-16 87.0 67 65.7
EL10Ac7g16855 Beta vulgaris HOM05D000018 ORTHO05D001040 1.0e-15 86.7 67 65.7
EL10Ac7g16860 Beta vulgaris HOM05D000018 ORTHO05D001040 1.0e-15 86.7 67 65.7
EL10Ac7g16867 Beta vulgaris HOM05D000018 ORTHO05D001040 1.0e-15 86.7 79 62.0
EL10Ac7g16854 Beta vulgaris HOM05D000018 ORTHO05D001040 1.3e-15 86.3 67 65.7
EL10Ac7g16857 Beta vulgaris HOM05D000018 ORTHO05D001040 1.3e-15 86.3 67 65.7
EL10Ac7g16861 Beta vulgaris HOM05D000018 ORTHO05D001040 1.3e-15 86.3 67 65.7
EL10Ac7g16862 Beta vulgaris HOM05D000018 ORTHO05D001040 2.9e-15 85.1 67 64.2
EL10Ac7g16858 Beta vulgaris HOM05D000018 ORTHO05D001040 5.0e-15 84.3 67 64.2
Ah.15g090660 Amaranthus hybridus HOM05D000018 ORTHO05D001040 1.5e-14 82.8 77 58.4
AUR62036977 Chenopodium quinoa HOM05D000018 ORTHO05D001040 1.9e-14 82.4 67 62.7
AUR62006233 Chenopodium quinoa HOM05D000018 ORTHO05D001040 3.3e-14 81.6 68 64.7
EL10Ac7g16859 Beta vulgaris HOM05D000018 ORTHO05D001040 5.5e-14 80.9 67 64.2
AUR62036975 Chenopodium quinoa HOM05D000018 ORTHO05D001040 3.6e-13 78.2 70 58.6
Sc17g0004420 Simmondsia chinensis HOM05D000018 ORTHO05D001040 8.0e-13 77.0 72 59.7
AUR62006217 Chenopodium quinoa HOM05D000018 ORTHO05D001040 8.9e-12 73.6 68 60.3
AUR62036979 Chenopodium quinoa HOM05D000018 ORTHO05D001040 2.6e-11 72.0 69 59.4
AUR62006230 Chenopodium quinoa HOM05D000018 ORTHO05D001040 2.2e-10 68.9 69 56.5
Hund19893 Selenicereus undatus HOM05D000018 ORTHO05D001040 3.7e-10 68.2 67 61.2
Ah.15g090730 Amaranthus hybridus HOM05D000018 ORTHO05D001040 3.1e-09 65.1 67 56.7
Ciclev10005267m.g Citrus clementina HOM05D000018 ORTHO05D001040 7.0e-09 63.9 72 54.2
Hma1.2p1_0343F.1_g130820 Hydrangea macrophylla HOM05D000018 ORTHO05D001040 7.0e-09 63.9 75 50.7
vmacro07743 Vaccinium macrocarpon HOM05D000018 ORTHO05D001040 3.5e-08 61.6 72 52.8
THA.LOC104811013 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 4.5e-08 61.2 69 50.7
Actinidia21929 Actinidia chinensis HOM05D000018 ORTHO05D001040 5.9e-08 60.8 83 47.0
AUR62013275 Chenopodium quinoa HOM05D000018 ORTHO05D001040 1.3e-07 59.7 74 48.6
Cc06_g07740 Coffea canephora HOM05D000018 ORTHO05D001040 1.3e-07 59.7 83 47.0
EL10Ac8g18771 Beta vulgaris HOM05D000018 ORTHO05D001040 2.3e-07 58.9 76 47.4
THA.LOC104811012 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 2.3e-07 58.9 79 44.3
Cfa002277 Carpinus fangiana HOM05D000018 ORTHO05D001040 2.9e-07 58.5 85 48.2
AUR62011213 Chenopodium quinoa HOM05D000018 ORTHO05D001040 2.9e-07 58.5 74 47.3
QL02p090427 Quercus lobata HOM05D000018 ORTHO05D001040 2.9e-07 58.5 71 50.7
Rhsim01G0055600 Rhododendron simsii HOM05D000018 ORTHO05D001040 2.9e-07 58.5 72 50.0
Rhsim01G0050400 Rhododendron simsii HOM05D000018 ORTHO05D001040 3.9e-07 58.2 72 50.0
Hund21589 Selenicereus undatus HOM05D000018 ORTHO05D001040 3.9e-07 58.2 74 51.4
AUR62028976 Chenopodium quinoa HOM05D000018 ORTHO05D001040 5.0e-07 57.8 76 47.4
Duzib235G1520 Durio zibethinus HOM05D000018 ORTHO05D001040 5.0e-07 57.8 74 48.6
Thecc.06G032100 Theobroma cacao HOM05D000018 ORTHO05D001040 5.0e-07 57.8 71 50.7
MD02G1020000 Malus domestica HOM05D000018 ORTHO05D001040 6.6e-07 57.4 73 49.3
AUR62006235 Chenopodium quinoa HOM05D000018 ORTHO05D138090 8.6e-07 57.0 63 54.0
Ah.09g224560 Amaranthus hybridus HOM05D000018 ORTHO05D001040 1.1e-06 56.6 73 49.3
AUR62011212 Chenopodium quinoa HOM05D000018 ORTHO05D001040 1.1e-06 56.6 72 44.4
Haze_25457 Corylus avellana HOM05D000018 ORTHO05D001040 1.1e-06 56.6 83 48.2
RcHm_v2.0_Chr2g0087201 Rosa chinensis HOM05D000018 ORTHO05D001040 1.1e-06 56.6 72 48.6
RcHm_v2.0_Chr2g0087211 Rosa chinensis HOM05D000018 ORTHO05D001040 1.1e-06 56.6 72 48.6
FAN28G1873 Fragaria x ananassa HOM05D000018 ORTHO05D001040 1.5e-06 56.2 71 49.3
FAN19G0251 Fragaria x ananassa HOM05D000018 ORTHO05D001040 1.9e-06 55.8 71 49.3
C09p55780 Brassica napus HOM05D000018 ORTHO05D001040 2.5e-06 55.5 74 47.3
BolC9t58447H Brassica oleracea HOM05D000018 ORTHO05D001040 2.5e-06 55.5 74 47.3
COL.COLO4_11863 Corchorus olitorius HOM05D000018 ORTHO05D001040 2.5e-06 55.5 72 47.2
MD14G1108700 Malus domestica HOM05D000018 ORTHO05D001040 2.5e-06 55.5 73 47.9
Sc08g0006080 Simmondsia chinensis HOM05D000018 ORTHO05D001040 2.5e-06 55.5 86 50.0
AUR62013267 Chenopodium quinoa HOM05D000018 ORTHO05D034341 3.3e-06 55.1 81 46.9
MELO3C027120.2 Cucumis melo HOM05D000018 ORTHO05D001040 3.3e-06 55.1 68 45.6
CsaV3_1G028300 Cucumis sativus L. HOM05D000018 ORTHO05D001040 3.3e-06 55.1 68 45.6
QL02p090461 Quercus lobata HOM05D000018 ORTHO05D001040 3.3e-06 55.1 71 47.9
A03p10080 Brassica napus HOM05D000018 ORTHO05D001040 4.3e-06 54.7 75 48.0
C03p11610 Brassica napus HOM05D000018 ORTHO05D001040 4.3e-06 54.7 74 50.0
Carub.0001s3856 Capsella rubella HOM05D000018 ORTHO05D001040 4.3e-06 54.7 73 47.9
Oeu055941.1 Olea europaea HOM05D000018 ORTHO05D001040 4.3e-06 54.7 69 44.9
THA.LOC104811014 Tarenaya hassleriana HOM05D000018 ORTHO05D001040 4.3e-06 54.7 69 49.3
AT5G20550 Arabidopsis thaliana HOM05D000018 ORTHO05D001040 5.6e-06 54.3 84 45.2
BcaC04g19429 Brassica carinata HOM05D000018 ORTHO05D001040 5.6e-06 54.3 72 48.6
AUR62013272 Chenopodium quinoa HOM05D000018 ORTHO05D001040 5.6e-06 54.3 74 48.6
Oeu055940.2 Olea europaea HOM05D000018 ORTHO05D001040 5.6e-06 54.3 71 46.5
GSVIVG01012842001 Vitis vinifera HOM05D000018 ORTHO05D001040 5.6e-06 54.3 86 44.2
Carub.0001s3857 Capsella rubella HOM05D000018 ORTHO05D001040 7.3e-06 53.9 74 50.0
AUR62036980 Chenopodium quinoa HOM05D000018 ORTHO05D001040 7.3e-06 53.9 78 43.6
MD02G1019700 Malus domestica HOM05D000018 ORTHO05D001040 7.3e-06 53.9 75 45.3
Peaxi162Scf00088g00818 Petunia axillaris HOM05D000018 ORTHO05D001040 7.3e-06 53.9 71 45.1
BraA03t10319Z Brassica rapa HOM05D000018 ORTHO05D001040 9.5e-06 53.5 74 50.0


User provided reference genes

Program Settings