Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 1.7e-210 735.7 370 100.0
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 1.6e-155 553.1 387 74.4
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 6.0e-155 551.2 389 71.5
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 1.3e-136 490.3 396 65.4
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 1.2e-115 420.6 396 56.8
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 5.2e-114 415.2 402 55.0
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 7.4e-113 411.4 397 56.4
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 9.7e-113 411.0 394 56.9
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 2.8e-112 409.5 399 55.6
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 3.7e-112 409.1 396 55.6
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 3.1e-111 406.0 397 55.7
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 5.3e-111 405.2 394 55.1
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 4.5e-110 402.1 398 54.8
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 1.0e-109 401.0 402 55.2
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 1.0e-109 401.0 401 54.1
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 1.7e-109 400.2 402 55.5
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 3.8e-109 399.1 400 54.2
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 1.5e-108 397.1 400 55.8
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 1.9e-108 396.7 398 53.5
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 2.5e-108 396.4 399 54.1
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 3.2e-108 396.0 411 53.0
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 1.2e-107 394.0 396 53.5
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 2.1e-107 393.3 390 54.6
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 2.7e-107 392.9 391 55.0
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 1.0e-106 391.0 397 53.7
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 1.0e-106 391.0 410 53.4
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 1.0e-106 391.0 395 53.7
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 1.8e-106 390.2 404 53.5
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 3.0e-106 389.4 413 52.1
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 5.2e-106 388.7 393 54.2
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 2.6e-105 386.3 396 53.3
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 3.4e-105 386.0 406 53.7
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 3.4e-105 386.0 400 51.5
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 3.4e-105 386.0 405 52.3
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 7.5e-105 384.8 403 52.4
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 9.8e-105 384.4 405 52.6
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 1.7e-104 383.6 412 51.0
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 1.7e-104 383.6 405 52.8
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.8e-104 382.9 405 52.6
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 2.8e-104 382.9 399 52.1
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 3.7e-104 382.5 393 52.9
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 3.7e-104 382.5 411 52.6
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 4.8e-104 382.1 403 52.1
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 4.8e-104 382.1 405 52.6
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 4.8e-104 382.1 401 51.9
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 8.3e-104 381.3 387 54.8
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 8.3e-104 381.3 404 52.5
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.4e-103 380.6 417 51.1
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.4e-103 379.8 405 52.1
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.4e-103 379.8 405 52.1
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 3.1e-103 379.4 394 54.1
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.1e-103 379.4 405 52.8
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 3.1e-103 379.4 391 53.5
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 5.4e-103 378.6 460 47.8
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 1.2e-102 377.5 398 52.0
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 1.6e-102 377.1 386 54.4
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.0e-102 376.7 405 52.1
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 3.5e-102 375.9 404 52.0
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 3.5e-102 375.9 369 57.5
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 7.7e-102 374.8 397 51.9
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 1.0e-101 374.4 397 53.7
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 1.0e-101 374.4 395 53.2
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 4.2e-100 369.0 390 51.8
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 3.6e-99 365.9 410 50.2
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 4.7e-99 365.5 447 48.1
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 4.7e-99 365.5 393 52.7
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 5.2e-98 362.1 390 52.6
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 8.8e-98 361.3 382 52.6
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 1.2e-97 360.9 398 50.5
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 2.6e-97 359.8 401 49.6
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 4.4e-97 359.0 388 50.8
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 4.4e-97 359.0 405 48.6
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 9.8e-97 357.8 407 51.4
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 3.7e-96 355.9 383 51.2
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 4.9e-96 355.5 403 49.6
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 8.3e-96 354.8 395 49.1
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.4e-95 353.2 396 49.0
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 4.1e-95 352.4 392 49.2
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 3.5e-94 349.4 395 48.6
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 1.3e-93 347.4 396 48.2
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 2.9e-93 346.3 388 49.5
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 5.0e-93 345.5 426 47.2
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 6.6e-93 345.1 390 46.9
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 2.5e-92 343.2 386 48.7
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 3.3e-92 342.8 379 49.3
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 7.2e-92 341.7 365 52.6
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 1.6e-91 340.5 414 46.6
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 2.1e-91 340.1 393 48.1
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 2.1e-91 340.1 404 46.5
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 6.1e-91 338.6 299 60.5
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 1.5e-89 334.0 385 49.6
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 2.6e-89 333.2 395 46.8
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 2.6e-89 333.2 383 48.8
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 2.6e-89 333.2 397 47.6
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 9.8e-89 331.3 384 49.7
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 1.3e-88 330.9 385 48.3
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 2.2e-88 330.1 385 49.4
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.6e-86 323.9 396 48.0
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 3.5e-86 322.8 395 47.6
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 4.6e-86 322.4 400 48.2
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 6.6e-85 318.5 397 45.8
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 4.4e-81 305.8 401 46.6
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 7.5e-81 305.1 265 58.1
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.2e-80 303.5 462 40.5
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 1.8e-74 283.9 345 47.2
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 2.0e-73 280.4 457 40.5
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 2.0e-73 280.4 387 42.6
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 3.4e-73 279.6 314 51.3
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 1.1e-71 274.6 167 82.6
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 1.6e-70 270.8 231 57.6
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.9e-68 263.8 234 56.4
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 1.6e-67 260.8 381 46.2
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 1.5e-65 254.2 428 38.3
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 3.2e-63 246.5 402 39.1
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 1.2e-62 244.6 381 40.2
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 2.1e-62 243.8 261 52.9
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 7.1e-55 218.8 391 37.6
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 9.3e-55 218.4 363 40.8
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 9.6e-52 208.4 392 37.0
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 1.3e-51 208.0 441 33.8
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 3.1e-50 203.4 465 33.1
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 3.1e-50 203.4 166 59.0
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 4.9e-48 196.1 181 54.7
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 5.1e-45 186.0 154 57.1
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 6.6e-45 185.7 209 52.6
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 1.6e-43 181.0 201 41.3
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 1.6e-43 181.0 286 41.6
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 1.1e-39 168.3 174 49.4
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 9.6e-36 155.2 113 62.8
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 5.9e-25 119.4 192 41.7
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 8.4e-24 115.5 263 33.8
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 4.6e-22 109.8 91 60.4
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 2.5e-20 104.0 149 40.9
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 3.7e-19 100.1 164 40.9
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.6e-17 94.0 114 43.9
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 1.8e-13 81.3 170 38.8
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 2.3e-13 80.9 60 66.7
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 2.3e-13 80.9 60 66.7
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 1.3e-11 75.1 66 54.5
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 2.8e-11 73.9 41 80.5
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 5.3e-10 69.7 95 41.1
MCO09G766 Micromonas commoda HOM05D004986 ORTHO05D005898 5.9e-09 66.2 190 28.4
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.7e-08 64.7 49 65.3


User provided reference genes

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