Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 0.0e+00 2373.6 1215 100.0
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 0.0e+00 2150.2 1215 91.4
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 0.0e+00 1403.3 1295 62.2
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 2.4e-293 1012.7 1264 51.9
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 3.3e-282 975.7 1336 47.4
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 1.2e-175 621.7 1318 37.5
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 1.1e-64 253.1 1285 26.8
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 1.9e-48 199.1 1141 27.3
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.6e-47 196.1 1303 27.5
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 4.1e-43 181.4 969 28.6
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 7.0e-43 180.6 1075 27.6
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 2.7e-42 178.7 1101 27.6
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 2.7e-42 178.7 1200 27.1
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 6.8e-38 164.1 1018 28.3
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 1.9e-35 156.0 1351 26.3
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 1.1e-32 146.7 1125 26.3
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 9.5e-32 143.7 1253 24.9
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 8.1e-31 140.6 1217 24.5
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.1e-30 140.2 1252 24.7
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 2.0e-29 136.0 1341 23.7
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.0e-29 136.0 1112 25.4
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 1.3e-28 133.3 1346 24.6
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 3.2e-27 128.6 1219 24.0
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 5.4e-27 127.9 1255 25.5
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 4.6e-26 124.8 831 26.0
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 1.3e-25 123.2 1340 24.4
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 1.3e-25 123.2 1262 24.7
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 8.6e-25 120.6 1321 24.8
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 1.5e-24 119.8 1347 24.8
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.2e-23 116.7 975 27.3
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 8.1e-23 114.0 624 27.4
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 1.1e-22 113.6 1125 24.1
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 4.0e-22 111.7 1339 24.6
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 2.6e-21 109.0 991 26.3
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 7.6e-21 107.5 921 26.1
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 1.3e-20 106.7 977 24.5
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 1.7e-20 106.3 1200 24.2
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 1.1e-19 103.6 1352 24.4
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 2.4e-19 102.4 1081 24.6
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 2.4e-19 102.4 1095 25.4
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 9.2e-19 100.5 715 25.7
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.2e-18 100.1 1323 24.0
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 7.8e-18 97.4 876 25.7
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 5.1e-17 94.7 1341 24.2
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 6.6e-17 94.4 634 27.8
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 1.1e-16 93.6 617 26.3
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.1e-16 93.6 504 26.8
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 1.5e-16 93.2 568 27.5
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 1.9e-16 92.8 772 24.2
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 3.3e-16 92.0 638 25.1
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 5.6e-16 91.3 468 25.4
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 1.6e-15 89.7 1130 24.1
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 2.1e-15 89.4 292 30.8
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 3.1e-14 85.5 1060 24.2
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 3.1e-14 85.5 975 23.9
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 6.8e-14 84.3 719 25.0
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 6.8e-14 84.3 939 24.3
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 2.0e-13 82.8 454 25.1
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 2.6e-13 82.4 691 23.2
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 2.6e-13 82.4 602 25.1
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 2.6e-13 82.4 909 24.9
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 4.4e-13 81.6 930 24.7
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 4.4e-13 81.6 1007 23.7
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 5.8e-13 81.3 1107 23.3
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 7.6e-13 80.9 1179 23.7
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 9.9e-13 80.5 1060 24.2
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 2.2e-12 79.3 1089 23.3
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 3.8e-12 78.6 1004 22.8
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 3.8e-12 78.6 1028 22.9
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 8.4e-12 77.4 1306 22.4
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 1.4e-11 76.6 556 23.6
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 3.2e-11 75.5 721 25.4
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 3.2e-11 75.5 413 25.7
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 7.1e-11 74.3 925 24.5
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 9.3e-11 73.9 505 25.3
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 2.7e-10 72.4 691 23.9
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 2.7e-10 72.4 1061 22.8
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 4.6e-10 71.6 339 27.4
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 6.0e-10 71.2 614 23.6
Lj1A1029T62 Lonicera japonica HOM05D006657 ORTHO05D005964 1.3e-09 70.1 218 37.6
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 1.5e-08 66.6 228 32.9
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 1.9e-08 66.2 971 23.7
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.9e-08 66.2 886 22.8
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 1.9e-08 66.2 896 22.4
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 2.5e-08 65.9 247 27.9
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 3.3e-08 65.5 976 23.4
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 4.3e-08 65.1 817 23.4
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 9.6e-08 63.9 586 23.9
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 1.3e-07 63.5 53 62.3
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 1.3e-07 63.5 664 22.6
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.8e-07 62.4 973 22.5
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 2.8e-07 62.4 973 22.5
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 8.1e-07 60.8 86 41.9
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 1.4e-06 60.1 66 48.5
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 1.4e-06 60.1 77 44.2
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 3.1e-06 58.9 245 26.9
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 5.3e-06 58.2 598 21.6


User provided reference genes

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