Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 0.0e+00 1294.6 657 100.0
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 0.0e+00 1204.1 638 95.0
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 1.6e-227 793.1 690 63.5
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 4.2e-127 459.5 704 42.5
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 3.1e-101 373.6 469 48.2
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 9.8e-100 368.6 668 37.3
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 4.9e-99 366.3 668 37.7
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 1.9e-95 354.4 674 36.6
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.1e-94 350.9 705 36.5
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 1.1e-90 338.6 663 34.8
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 4.1e-90 336.7 683 35.6
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 9.2e-90 335.5 359 54.0
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 6.0e-89 332.8 702 35.5
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 3.1e-85 320.5 681 34.7
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 6.8e-85 319.3 668 34.6
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 1.4e-82 311.6 676 33.6
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 2.4e-82 310.8 682 33.9
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 3.5e-81 307.0 668 33.8
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 4.6e-81 306.6 673 33.6
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 7.8e-81 305.8 604 36.6
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 3.0e-80 303.9 713 34.1
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 2.1e-78 297.7 663 33.2
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 3.6e-78 297.0 685 31.7
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 1.1e-77 295.4 688 33.4
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 1.8e-77 294.7 662 34.6
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 4.0e-77 293.5 676 34.0
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 6.9e-77 292.7 676 35.1
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 9.0e-77 292.4 653 34.3
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 9.0e-77 292.4 594 34.2
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 4.4e-76 290.0 659 33.7
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 5.8e-76 289.7 726 31.8
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.3e-75 288.5 662 34.3
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 3.8e-75 287.0 692 32.2
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 4.9e-75 286.6 662 33.2
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 6.4e-75 286.2 675 32.7
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 8.4e-75 285.8 706 33.3
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 1.9e-74 284.6 679 32.0
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 2.1e-73 281.2 670 32.1
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 3.5e-73 280.4 679 31.2
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 6.0e-73 279.6 655 32.2
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 7.8e-73 279.3 606 34.7
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 1.3e-72 278.5 669 31.2
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 1.7e-72 278.1 690 30.1
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 2.3e-72 277.7 655 32.1
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 2.3e-72 277.7 489 37.8
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 3.9e-72 276.9 671 31.9
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 3.9e-72 276.9 686 31.5
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 6.6e-72 276.2 681 31.3
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 1.5e-71 275.0 687 32.5
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 1.9e-71 274.6 603 32.7
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 5.6e-71 273.1 649 33.3
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 7.3e-71 272.7 671 32.0
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 7.3e-71 272.7 657 32.6
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 3.6e-70 270.4 658 31.9
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 3.6e-70 270.4 569 34.3
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 6.2e-70 269.6 666 32.1
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 8.1e-70 269.2 663 31.4
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 1.8e-69 268.1 692 31.8
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 2.4e-69 267.7 659 31.6
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.4e-69 267.7 660 32.9
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 4.0e-69 266.9 654 32.7
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 9.0e-69 265.8 624 32.7
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 1.2e-68 265.4 699 30.9
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 1.5e-68 265.0 578 33.6
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 1.5e-68 265.0 660 32.7
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.6e-68 264.2 654 31.5
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 4.5e-68 263.5 644 31.2
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 7.6e-68 262.7 664 30.9
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 2.2e-67 261.2 681 30.7
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.6e-65 255.0 675 31.1
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.7e-65 254.2 657 30.6
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 6.7e-64 249.6 680 31.0
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 6.7e-64 249.6 680 31.0
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 8.7e-64 249.2 543 33.5
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 2.5e-63 247.7 709 29.6
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 5.6e-63 246.5 543 33.3
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.1e-62 244.6 696 29.6
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 2.8e-62 244.2 566 32.2
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 4.8e-62 243.4 652 31.1
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.4e-61 241.9 738 29.4
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 2.4e-61 241.1 674 28.8
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 3.1e-61 240.7 559 32.4
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 3.1e-61 240.7 644 32.0
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 1.2e-60 238.8 677 28.8
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 1.2e-60 238.8 712 29.6
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 1.1e-58 232.3 660 31.1
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 1.4e-58 231.9 661 29.2
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 9.3e-58 229.2 681 28.9
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 3.0e-56 224.2 632 30.1
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 1.9e-55 221.5 639 29.4
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 2.8e-54 217.6 548 33.0
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.4e-53 215.3 410 36.8
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 1.2e-52 212.2 649 30.4
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 1.5e-52 211.8 649 29.9
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 4.5e-52 210.3 662 28.1
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.0e-48 199.1 292 42.8
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 2.6e-44 184.5 667 25.6
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 5.5e-42 176.8 188 54.8
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 3.0e-40 171.0 665 27.1
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.8e-37 161.8 274 39.4
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 3.4e-36 157.5 381 32.8
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 3.2e-34 151.0 344 34.6
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.5e-28 131.0 314 30.3
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 3.3e-23 114.4 625 23.2
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 8.2e-22 109.8 464 26.1
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 7.0e-21 106.7 553 24.4
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 7.7e-20 103.2 514 25.1
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 8.5e-19 99.8 412 24.5
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.2e-18 97.4 338 28.1
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 3.0e-16 91.3 425 24.0
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 3.7e-14 84.3 209 30.6
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 1.3e-11 75.9 101 44.6
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 7.5e-07 60.1 92 35.9
SEGI_29361 Sequoiadendron giganteum HOM05D006730 ORTHO05D008189 9.8e-07 59.7 336 24.1


User provided reference genes

Program Settings