Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 4.8e-191 671.0 342 100.0
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.2e-158 562.0 342 86.5
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 5.2e-145 518.1 334 78.1
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 2.9e-143 512.3 324 80.6
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 5.6e-139 498.0 334 77.8
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.4e-134 483.4 330 73.9
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 3.0e-132 475.7 350 70.3
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.9e-131 473.0 336 72.6
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 1.2e-128 463.8 341 70.4
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.5e-128 463.4 345 69.3
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 2.6e-128 462.6 340 71.2
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 5.8e-128 461.5 334 71.0
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 7.6e-128 461.1 337 68.5
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 2.2e-127 459.5 340 70.9
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 3.8e-127 458.8 342 70.2
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.1e-126 457.2 337 69.4
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.1e-126 457.2 344 67.7
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 2.4e-126 456.1 332 69.3
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.4e-126 456.1 337 69.1
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 4.2e-126 455.3 337 69.4
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 2.7e-125 452.6 338 69.8
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 3.5e-125 452.2 344 67.4
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 4.6e-125 451.8 329 68.7
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 6.0e-125 451.4 341 67.7
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.7e-124 449.9 332 67.8
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 2.3e-124 449.5 353 69.7
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 3.9e-124 448.7 346 66.5
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 3.9e-124 448.7 335 68.4
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 3.9e-124 448.7 333 68.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 3.9e-124 448.7 337 68.2
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 3.9e-124 448.7 344 66.0
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 6.6e-124 448.0 330 69.1
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.1e-123 447.2 345 66.4
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 1.1e-123 447.2 343 67.6
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 1.5e-123 446.8 349 66.2
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 1.9e-123 446.4 344 66.9
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 3.3e-123 445.7 339 68.4
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 5.6e-123 444.9 335 68.1
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 5.6e-123 444.9 338 67.5
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 1.3e-122 443.7 339 68.4
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 1.6e-122 443.4 335 69.3
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 2.1e-122 443.0 343 67.3
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 6.2e-122 441.4 344 66.3
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 6.2e-122 441.4 334 69.2
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 1.1e-121 440.7 335 69.0
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 1.1e-121 440.7 334 68.3
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.8e-121 439.9 338 66.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 3.1e-121 439.1 334 68.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 4.0e-121 438.7 339 67.6
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 6.9e-121 438.0 338 67.2
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 1.2e-120 437.2 345 65.8
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 1.5e-120 436.8 331 66.2
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.5e-120 436.8 337 66.5
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 3.4e-120 435.6 338 67.2
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.5e-120 435.3 334 66.8
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.3e-119 433.7 341 66.0
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.7e-119 433.3 338 65.7
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 1.7e-119 433.3 331 66.8
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 2.2e-119 433.0 336 67.0
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.9e-119 431.8 338 66.0
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 6.4e-119 431.4 338 66.6
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 6.4e-119 431.4 334 67.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.1e-118 430.6 337 66.8
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 4.2e-118 428.7 333 67.0
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 4.2e-118 428.7 334 66.8
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 7.1e-118 427.9 342 66.7
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 9.3e-118 427.6 336 66.4
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 4.6e-117 425.2 346 63.3
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.0e-116 424.1 344 62.8
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.3e-116 423.7 353 64.0
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.8e-116 423.3 337 65.6
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 2.3e-116 422.9 336 65.5
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 6.7e-116 421.4 336 64.9
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 3.3e-115 419.1 324 67.3
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 3.3e-115 419.1 336 64.6
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 2.9e-111 406.0 339 63.4
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 2.1e-109 399.8 332 64.8
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.4e-105 387.1 331 64.4
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 6.9e-105 384.8 316 65.2
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 6.9e-105 384.8 343 60.1
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.2e-104 384.0 336 60.4
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 7.6e-104 381.3 288 67.0
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.3e-103 380.6 292 66.1
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 1.3e-103 380.6 383 56.7
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 1.5e-99 367.1 333 60.7
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 5.7e-99 365.2 341 60.1
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 9.7e-99 364.4 417 50.4
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 2.2e-95 353.2 330 58.8
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 2.1e-93 346.7 365 53.2
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.7e-93 346.3 284 64.8
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 2.7e-93 346.3 338 55.0
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 1.0e-87 327.8 327 53.2
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 3.0e-84 316.2 327 52.9
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 4.2e-78 295.8 329 51.1
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 3.6e-77 292.7 221 69.2
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 1.3e-74 284.3 222 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 9.7e-67 258.1 308 48.4
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 1.2e-56 224.6 364 40.9
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 7.7e-56 221.9 287 45.3
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 2.0e-48 197.2 310 39.0
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 8.6e-47 191.8 177 58.8
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.4e-44 184.5 187 57.2
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 5.8e-43 179.1 180 53.9
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 4.7e-37 159.5 107 68.2
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 8.9e-36 155.2 133 57.1
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.2e-34 150.6 96 76.0
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 2.7e-16 90.5 222 34.2
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 7.6e-11 72.4 51 64.7
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 1.1e-09 68.6 76 53.9
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 1.9e-09 67.8 83 50.6
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 1.6e-08 64.7 51 58.8


User provided reference genes

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