Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 9.5e-40 166.4 84 100.0
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 4.7e-39 164.1 84 98.8
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 6.6e-33 143.7 84 85.7
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 5.6e-32 140.6 84 81.0
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 9.5e-32 139.8 77 85.7
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 2.8e-31 138.3 84 79.8
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.6e-31 137.9 75 89.3
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.6e-31 137.9 75 88.0
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 8.3e-28 126.7 76 75.0
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 8.3e-28 126.7 76 75.0
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 1.4e-27 125.9 75 78.7
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.4e-27 125.9 76 75.0
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.4e-27 125.9 76 75.0
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 1.4e-27 125.9 76 75.0
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 2.4e-27 125.2 75 77.3
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 3.2e-27 124.8 76 73.7
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 4.1e-27 124.4 75 76.0
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 5.4e-27 124.0 76 75.0
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 7.0e-27 123.6 76 76.3
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 7.0e-27 123.6 74 78.4
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 7.0e-27 123.6 75 77.3
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 7.0e-27 123.6 75 77.3
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 9.2e-27 123.2 75 74.7
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 9.2e-27 123.2 74 79.7
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 1.2e-26 122.9 75 76.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 2.0e-26 122.1 74 78.4
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 2.0e-26 122.1 75 73.3
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.7e-26 121.7 74 77.0
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 3.5e-26 121.3 75 74.7
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.5e-26 121.3 74 77.0
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 3.5e-26 121.3 75 77.3
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 4.6e-26 120.9 74 74.3
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.0e-26 120.6 76 71.1
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 7.8e-26 120.2 73 78.1
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 7.8e-26 120.2 73 74.0
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 7.8e-26 120.2 74 74.3
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 1.0e-25 119.8 80 70.0
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.0e-25 119.8 74 74.3
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 1.0e-25 119.8 73 75.3
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 1.3e-25 119.4 75 73.3
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 1.3e-25 119.4 75 73.3
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 1.3e-25 119.4 74 75.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.7e-25 119.0 74 75.7
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 1.7e-25 119.0 80 70.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 1.7e-25 119.0 80 70.0
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.7e-25 119.0 74 74.3
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 2.3e-25 118.6 74 75.7
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 2.3e-25 118.6 76 68.4
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 3.0e-25 118.2 74 75.7
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 3.0e-25 118.2 75 73.3
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 3.9e-25 117.9 80 70.0
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 3.9e-25 117.9 80 70.0
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.9e-25 117.9 78 70.5
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.9e-25 117.9 74 73.0
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 5.0e-25 117.5 74 77.0
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 5.0e-25 117.5 75 70.7
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.6e-25 117.1 73 75.3
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.6e-25 117.1 73 75.3
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 6.6e-25 117.1 74 74.3
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 6.6e-25 117.1 74 74.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.1e-24 116.3 74 74.3
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.5e-24 115.9 78 69.2
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 1.5e-24 115.9 76 72.4
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 1.9e-24 115.5 75 72.0
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 1.9e-24 115.5 77 71.4
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.9e-24 115.5 74 73.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 2.5e-24 115.2 74 71.6
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 2.5e-24 115.2 74 68.9
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 2.5e-24 115.2 74 74.3
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 3.3e-24 114.8 87 65.5
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 4.3e-24 114.4 74 70.3
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 9.5e-24 113.2 74 73.0
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.2e-23 112.8 73 75.3
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.2e-23 112.8 74 70.3
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 2.1e-23 112.1 76 67.1
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 2.8e-23 111.7 76 68.4
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 2.8e-23 111.7 74 68.9
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 2.8e-23 111.7 76 68.4
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.1e-22 109.8 74 70.3
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 2.3e-22 108.6 76 69.7
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 2.3e-22 108.6 74 70.3
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 2.3e-22 108.6 75 66.7
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.1e-22 108.2 74 67.6
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 3.1e-22 108.2 74 67.6
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 8.9e-22 106.7 77 64.9
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 1.2e-21 106.3 76 65.8
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.2e-21 106.3 73 69.9
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.2e-21 106.3 73 69.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.5e-21 105.9 74 66.2
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 2.6e-21 105.1 76 67.1
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 2.6e-21 105.1 76 64.5
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 3.4e-21 104.8 76 64.5
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 4.4e-21 104.4 105 54.3
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 5.8e-21 104.0 65 70.8
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 7.5e-21 103.6 72 66.7
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.3e-20 102.8 67 71.6
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 1.7e-20 102.4 73 68.5
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 2.2e-20 102.1 73 67.1
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 2.9e-20 101.7 74 66.2
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 4.9e-20 100.9 73 67.1
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 6.4e-20 100.5 67 67.2
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 6.4e-20 100.5 76 61.8
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 6.4e-20 100.5 73 65.8
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 2.4e-19 98.6 73 64.4
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 2.4e-19 98.6 76 61.8
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 2.1e-18 95.5 67 65.7
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 1.5e-16 89.4 118 42.4
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 1.9e-16 89.0 66 63.6
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 2.1e-15 85.5 67 59.7
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 6.8e-14 80.5 51 72.5
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 3.2e-11 71.6 60 56.7
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 4.6e-10 67.8 57 56.1
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 1.3e-09 66.2 61 55.7
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 3.0e-09 65.1 63 52.4
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.1e-08 63.2 42 71.4
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 1.5e-08 62.8 42 69.0
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 2.5e-08 62.0 42 64.3
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 2.8e-07 58.5 30 86.7
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 1.8e-06 55.8 41 61.0
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 2.4e-06 55.5 38 63.2
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 6.9e-06 53.9 41 61.0


User provided reference genes

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