Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 3.5e-74 281.6 144 100.0
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 8.0e-71 270.4 146 96.6
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.2e-55 219.9 144 80.6
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 2.3e-54 215.7 140 78.6
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 4.9e-44 181.4 135 71.1
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 4.1e-43 178.3 122 71.3
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 5.4e-43 177.9 121 74.4
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 5.4e-43 177.9 122 74.6
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 7.0e-43 177.6 122 74.6
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.7e-42 175.6 122 73.8
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 3.5e-42 175.3 122 72.1
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 7.8e-42 174.1 121 73.6
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.3e-41 173.3 122 70.5
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.3e-41 173.3 122 71.3
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.7e-41 172.9 121 71.9
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 1.7e-41 172.9 122 69.7
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.7e-41 172.9 122 72.1
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.3e-41 172.6 122 70.5
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 3.0e-41 172.2 122 70.5
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 6.6e-41 171.0 118 73.7
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 8.6e-41 170.6 122 72.1
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.1e-40 170.2 122 70.5
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.9e-40 169.5 122 68.0
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.9e-40 169.5 123 71.5
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 2.5e-40 169.1 122 69.7
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 3.3e-40 168.7 122 67.2
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 4.3e-40 168.3 122 68.9
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 4.3e-40 168.3 122 69.7
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 7.3e-40 167.5 121 71.9
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 9.5e-40 167.2 122 67.2
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 9.5e-40 167.2 123 72.4
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.6e-39 166.4 115 73.0
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.6e-39 166.4 124 71.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 2.1e-39 166.0 122 66.4
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 2.1e-39 166.0 120 69.2
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 3.6e-39 165.2 118 71.2
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 3.6e-39 165.2 122 68.9
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.2e-39 164.5 122 70.5
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 6.2e-39 164.5 123 66.7
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 8.1e-39 164.1 122 68.9
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 8.1e-39 164.1 121 68.6
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 1.1e-38 163.7 122 66.4
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.1e-38 163.7 115 71.3
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.1e-38 163.7 122 68.9
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.1e-38 163.7 124 70.2
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 1.1e-38 163.7 124 70.2
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 1.8e-38 162.9 118 72.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 2.3e-38 162.5 122 68.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 2.3e-38 162.5 114 71.1
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 3.1e-38 162.2 122 69.7
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.1e-38 162.2 122 67.2
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.0e-38 161.8 122 68.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 6.8e-38 161.0 122 68.0
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 6.8e-38 161.0 121 67.8
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 6.8e-38 161.0 120 69.2
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 6.8e-38 161.0 122 68.0
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 8.9e-38 160.6 154 58.4
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.2e-37 160.2 114 70.2
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.2e-37 160.2 114 70.2
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.2e-37 160.2 114 70.2
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.5e-37 159.8 121 66.9
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 2.6e-37 159.1 121 66.9
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 2.6e-37 159.1 121 68.6
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.6e-37 159.1 121 66.1
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 3.4e-37 158.7 118 72.0
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 3.4e-37 158.7 122 65.6
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 4.4e-37 158.3 122 68.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 4.4e-37 158.3 123 65.9
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 9.9e-37 157.1 121 66.1
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 9.9e-37 157.1 118 71.2
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 1.3e-36 156.8 121 63.6
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.2e-36 156.0 121 63.6
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 2.2e-36 156.0 123 67.5
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 2.9e-36 155.6 123 68.3
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 3.7e-36 155.2 114 67.5
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 8.3e-36 154.1 122 63.1
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.2e-35 152.1 115 64.3
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.2e-34 150.2 139 57.6
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 1.2e-34 150.2 118 61.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.5e-34 148.7 114 66.7
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 6.0e-34 147.9 120 60.8
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 6.0e-34 147.9 121 60.3
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.3e-33 146.0 121 57.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 5.6e-32 141.4 120 56.7
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 5.6e-32 141.4 121 57.0
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 9.5e-32 140.6 104 66.3
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 9.5e-32 140.6 122 54.1
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 8.1e-31 137.5 113 61.9
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.4e-30 136.7 99 65.7
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.8e-30 136.3 105 64.8
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 2.4e-30 136.0 122 55.7
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 2.6e-29 132.5 90 73.3
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.8e-28 128.6 89 71.9
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 8.4e-28 127.5 169 45.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 2.4e-27 125.9 85 71.8
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 2.4e-27 125.9 90 65.6
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.1e-26 122.9 89 68.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 4.6e-26 121.7 93 66.7
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.6e-26 121.7 89 68.5
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.0e-25 120.6 121 52.9
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.3e-25 120.2 81 74.1
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.3e-25 119.4 100 58.0
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 3.3e-24 115.5 89 64.0
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 4.3e-24 115.2 119 48.7
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 5.6e-24 114.8 89 62.9
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.6e-23 112.1 118 52.5
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 6.2e-23 111.3 89 61.8
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 1.2e-21 107.1 93 55.9
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.4e-21 105.5 83 62.7
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.4e-19 100.1 122 41.8
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.3e-17 92.8 121 44.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 8.1e-15 84.3 54 68.5
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 2.8e-07 59.3 120 36.7


User provided reference genes

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