Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 5.0e-94 347.8 184 100.0
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 7.8e-63 244.2 131 97.7
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 7.6e-58 227.6 131 89.3
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 3.3e-53 212.2 141 81.6
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 1.6e-52 209.9 128 80.5
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 1.8e-51 206.5 139 77.0
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 3.1e-51 205.7 140 76.4
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 5.3e-51 204.9 140 74.3
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.0e-51 204.1 129 79.8
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 1.5e-50 203.4 140 76.4
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 2.0e-50 203.0 139 74.1
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 5.8e-50 201.4 140 75.0
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 5.8e-50 201.4 139 75.5
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 7.6e-50 201.1 139 74.1
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 1.3e-49 200.3 140 71.4
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 1.3e-49 200.3 139 74.8
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 1.3e-49 200.3 139 74.8
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.3e-49 200.3 139 72.7
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 1.7e-49 199.9 141 73.8
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 2.2e-49 199.5 135 74.8
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 2.2e-49 199.5 139 75.5
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 2.2e-49 199.5 136 74.3
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 2.9e-49 199.1 139 72.7
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 3.8e-49 198.7 139 71.9
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 3.8e-49 198.7 140 72.1
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 4.9e-49 198.4 139 74.1
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 6.4e-49 198.0 138 73.9
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 6.4e-49 198.0 139 73.4
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 6.4e-49 198.0 139 73.4
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 8.4e-49 197.6 140 71.4
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 1.4e-48 196.8 139 71.9
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.4e-48 196.8 139 71.9
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 1.4e-48 196.8 139 71.9
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 1.9e-48 196.4 139 72.7
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.9e-48 196.4 138 73.2
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 2.4e-48 196.1 140 71.4
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 2.4e-48 196.1 149 67.1
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 4.2e-48 195.3 140 70.7
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 4.2e-48 195.3 139 72.7
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 5.4e-48 194.9 139 71.2
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 9.3e-48 194.1 138 73.9
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 9.3e-48 194.1 140 70.0
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.2e-47 193.7 138 71.0
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 1.6e-47 193.4 139 71.2
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 2.1e-47 193.0 139 73.4
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.1e-47 193.0 140 70.0
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 4.6e-47 191.8 140 69.3
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 6.0e-47 191.4 140 71.4
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 7.9e-47 191.0 150 67.3
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 1.8e-46 189.9 140 68.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.8e-46 189.9 139 69.8
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 1.8e-46 189.9 140 68.6
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 2.3e-46 189.5 146 67.1
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 2.3e-46 189.5 126 73.0
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 3.0e-46 189.1 140 68.6
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 3.9e-46 188.7 137 72.3
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 5.1e-46 188.3 145 66.2
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 8.7e-46 187.6 138 68.8
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.1e-45 187.2 148 66.9
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 2.5e-45 186.0 138 68.8
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 2.5e-45 186.0 139 66.2
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.3e-45 185.7 140 71.4
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 9.6e-45 184.1 140 69.3
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 9.6e-45 184.1 137 69.3
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 4.8e-44 181.8 188 55.3
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 2.4e-43 179.5 136 67.6
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 9.0e-43 177.6 127 73.2
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.2e-42 177.2 148 64.9
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.5e-42 176.8 138 65.2
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.5e-42 176.8 138 65.2
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 2.6e-42 176.0 147 65.3
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 2.6e-42 176.0 136 66.2
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 7.6e-42 174.5 137 64.2
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.7e-41 173.3 138 61.6
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 8.4e-41 171.0 116 73.3
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 1.4e-40 170.2 186 54.3
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 1.4e-40 170.2 136 65.4
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 2.5e-40 169.5 124 70.2
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.1e-39 166.4 102 78.4
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 2.1e-39 166.4 125 67.2
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 4.6e-39 165.2 145 60.0
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 1.5e-37 160.2 140 60.0
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.9e-37 159.8 144 63.2
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 4.3e-37 158.7 102 74.5
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 5.7e-37 158.3 152 56.6
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 2.8e-36 156.0 107 74.8
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 4.8e-36 155.2 108 75.0
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 2.6e-34 149.4 139 56.8
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.7e-33 146.7 131 64.1
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 5.0e-33 145.2 103 72.8
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.5e-32 142.9 136 55.9
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 7.9e-31 137.9 133 59.4
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 7.9e-31 137.9 107 63.6
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 1.0e-30 137.5 139 54.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.0e-30 137.5 139 54.0
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.3e-30 137.1 139 54.0
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 1.3e-30 137.1 139 54.7
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 2.3e-30 136.3 139 53.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 3.0e-30 136.0 139 53.2
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 3.0e-30 136.0 138 53.6
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 8.7e-30 134.4 108 62.0
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 1.1e-29 134.0 147 49.0
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.5e-29 133.7 139 51.8
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 1.5e-29 133.7 139 46.8
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 1.5e-29 133.7 137 53.3
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 1.9e-29 133.3 139 52.5
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.5e-29 132.9 139 52.5
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 2.5e-29 132.9 139 52.5
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 4.3e-29 132.1 139 52.5
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 5.7e-29 131.7 139 51.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 1.1e-24 117.5 68 82.4
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 1.4e-22 110.5 134 44.8
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 5.1e-22 108.6 65 80.0
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 2.4e-19 99.8 70 68.6
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 3.6e-15 85.9 61 70.5
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 1.5e-08 63.9 98 40.8
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 2.1e-07 60.1 36 77.8
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 6.1e-07 58.5 71 45.1
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 8.0e-07 58.2 42 69.0
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 8.0e-07 58.2 42 69.0
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 8.8e-06 54.7 138 30.4


User provided reference genes

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