Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 1.1e-48 196.4 106 100.0
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 3.0e-43 178.3 100 97.0
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 5.9e-39 164.1 99 86.9
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 4.7e-36 154.5 97 83.5
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 3.4e-34 148.3 99 83.8
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 1.4e-32 142.9 100 78.0
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 9.2e-32 140.2 105 74.3
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 1.6e-31 139.4 98 76.5
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 1.7e-30 136.0 96 75.0
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 2.3e-30 135.6 100 74.0
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 6.6e-30 134.0 97 72.2
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 1.1e-29 133.3 103 69.9
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 1.5e-29 132.9 98 73.5
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 2.5e-29 132.1 96 76.0
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 3.3e-29 131.7 101 70.3
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 1.2e-28 129.8 97 71.1
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 1.2e-28 129.8 97 69.1
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.1e-28 129.0 98 74.5
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 2.8e-28 128.6 95 71.6
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 2.8e-28 128.6 95 71.6
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 6.2e-28 127.5 96 69.8
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 1.0e-27 126.7 102 70.6
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 1.0e-27 126.7 103 67.0
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 1.0e-27 126.7 100 68.0
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 1.4e-27 126.3 102 66.7
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.4e-27 126.3 104 66.3
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 3.1e-27 125.2 101 68.3
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 3.1e-27 125.2 103 68.0
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 3.1e-27 125.2 100 69.0
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 3.1e-27 125.2 100 69.0
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 4.0e-27 124.8 103 68.0
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 4.0e-27 124.8 102 67.6
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 4.0e-27 124.8 101 70.3
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 4.0e-27 124.8 99 70.7
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 5.2e-27 124.4 98 73.5
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 6.8e-27 124.0 92 68.5
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 1.2e-26 123.2 105 68.6
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 1.5e-26 122.9 99 66.7
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 2.0e-26 122.5 98 72.4
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 2.0e-26 122.5 99 67.7
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 2.6e-26 122.1 79 78.5
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 3.4e-26 121.7 98 69.4
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 3.4e-26 121.7 100 69.0
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 3.4e-26 121.7 100 71.0
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 4.4e-26 121.3 99 68.7
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 4.4e-26 121.3 101 70.3
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 5.8e-26 120.9 96 72.9
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 7.5e-26 120.6 88 73.9
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 9.8e-26 120.2 99 66.7
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 9.8e-26 120.2 96 72.9
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.3e-25 119.8 96 71.9
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 1.7e-25 119.4 98 68.4
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 2.2e-25 119.0 99 64.6
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 4.9e-25 117.9 89 70.8
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 4.9e-25 117.9 88 71.6
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 4.9e-25 117.9 84 73.8
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 6.4e-25 117.5 90 70.0
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 6.4e-25 117.5 99 65.7
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 8.3e-25 117.1 98 64.3
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 8.3e-25 117.1 94 67.0
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 8.3e-25 117.1 100 67.0
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.1e-24 116.7 81 76.5
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 1.1e-24 116.7 81 76.5
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 1.1e-24 116.7 86 72.1
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 1.1e-24 116.7 87 71.3
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 1.4e-24 116.3 90 71.1
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 1.4e-24 116.3 104 64.4
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 1.4e-24 116.3 91 72.5
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 1.9e-24 115.9 103 68.0
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 1.9e-24 115.9 103 68.0
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 1.9e-24 115.9 97 69.1
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 2.4e-24 115.5 92 68.5
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 3.2e-24 115.2 78 76.9
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 4.1e-24 114.8 99 65.7
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 4.1e-24 114.8 93 68.8
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 4.1e-24 114.8 87 72.4
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 5.4e-24 114.4 105 62.9
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 7.0e-24 114.0 83 73.5
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 9.2e-24 113.6 100 64.0
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 1.2e-23 113.2 86 72.1
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 2.0e-23 112.5 84 72.6
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 2.0e-23 112.5 84 72.6
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 2.0e-23 112.5 96 65.6
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-23 112.1 86 72.1
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-23 112.1 84 73.8
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-23 112.1 84 73.8
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-23 112.1 84 73.8
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.7e-23 112.1 84 73.8
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 3.5e-23 111.7 82 72.0
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.5e-23 111.7 96 67.7
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 6.0e-23 110.9 90 71.1
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 6.0e-23 110.9 78 73.1
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 6.0e-23 110.9 82 74.4
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 6.0e-23 110.9 82 74.4
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.0e-22 110.2 96 66.7
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.7e-22 109.4 75 77.3
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 1.7e-22 109.4 95 65.3
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 3.0e-22 108.6 79 74.7
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 5.0e-22 107.8 97 63.9
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 5.0e-22 107.8 79 75.9
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 6.6e-22 107.5 101 64.4
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 6.6e-22 107.5 90 60.0
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 8.6e-22 107.1 79 74.7
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 1.1e-21 106.7 79 73.4
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 2.5e-21 105.5 97 62.9
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 2.5e-21 105.5 97 62.9
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 2.5e-21 105.5 97 62.9
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 2.5e-21 105.5 97 62.9
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 2.5e-21 105.5 96 61.5
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 2.5e-21 105.5 97 62.9
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 3.3e-21 105.1 96 61.5
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 3.3e-21 105.1 96 61.5
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 3.3e-21 105.1 96 61.5
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 3.3e-21 105.1 97 56.7
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 3.3e-21 105.1 97 61.9
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 4.3e-21 104.8 96 61.5
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 4.3e-21 104.8 97 60.8
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 7.3e-21 104.0 84 67.9
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 7.3e-21 104.0 96 61.5
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 7.3e-21 104.0 96 61.5
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 7.3e-21 104.0 78 69.2
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 4.7e-20 101.3 97 60.8
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 6.2e-20 100.9 97 59.8
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 8.1e-20 100.5 78 67.9
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 1.1e-19 100.1 79 68.4
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 1.4e-19 99.8 78 67.9
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 4.0e-19 98.2 76 65.8
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 4.0e-19 98.2 85 60.0
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 4.0e-19 98.2 91 58.2
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 1.2e-18 96.7 83 63.9
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 1.5e-18 96.3 96 55.2
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 2.0e-18 95.9 103 55.3
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 1.4e-16 89.7 84 59.5
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.2e-16 88.6 70 71.4
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 2.1e-15 85.9 101 58.4
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 1.4e-11 73.2 91 51.6
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 4.4e-10 68.2 57 70.2
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 4.9e-09 64.7 53 67.9
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 3.2e-08 62.0 49 65.3
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.8e-07 57.4 44 70.5
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 3.0e-06 55.5 65 46.2


User provided reference genes

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