Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005308 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.0e-127 460.3 277 100.0
AUR62005306 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.6e-51 206.1 129 88.4
AUR62005305 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.6e-41 173.3 107 99.1
AUR62005251 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.7e-41 171.4 107 98.1
AUR62005303 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.7e-40 169.5 117 83.8
AUR62005276 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.0e-39 165.2 115 84.3
AUR62000690 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.6e-38 164.1 246 52.0
AUR62017647 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.5e-38 162.5 120 70.0
AUR62000665 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.3e-37 161.0 117 76.1
AUR62000650 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.5e-36 157.5 118 72.0
AUR62000678 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.5e-36 155.6 113 69.9
AUR62000691 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.6e-35 154.1 109 80.7
AUR62000649 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.0e-33 147.1 111 67.6
AUR62000666 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.0e-33 147.1 112 67.0
AUR62000710 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.3e-33 146.4 106 71.7
AUR62005167 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.7e-33 144.8 111 80.2
AUR62005260 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.8e-32 142.5 103 70.9
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 3.1e-31 139.8 99 72.7
AUR62005214 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.1e-31 139.8 99 72.7
AUR62000680 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.3e-31 139.0 127 59.1
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 1.7e-29 134.0 114 61.4
AUR62007002 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.5e-29 131.7 110 69.1
AUR62005284 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.2e-24 117.1 147 51.0
AUR62004849 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.9e-21 106.7 118 67.8
Ah.06g190010 Amaranthus hybridus HOM05D000162 ORTHO05D000090 2.1e-19 100.5 132 56.8
EL10Ac4g09866 Beta vulgaris HOM05D000162 ORTHO05D000090 2.1e-19 100.5 99 58.6
AUR62000700 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.1e-19 100.5 86 81.4
AUR62000679 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.0e-18 98.2 49 98.0
AUR62000711 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.8e-18 97.4 119 60.5
AUR62000669 Chenopodium quinoa HOM05D000162 ORTHO05D003288 9.8e-17 91.7 75 60.0
AUR62005290 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.5e-12 77.0 71 57.7
EL10Ac4g09836 Beta vulgaris HOM05D000162 ORTHO05D003288 3.3e-12 76.6 57 63.2
EL10Ac4g09814 Beta vulgaris HOM05D000162 ORTHO05D000090 2.8e-11 73.6 65 55.4
arahy.Tifrunner.gnm1.ann1.KQ42YR Arachis hypogaea HOM05D018308 ORTHO05D003288 1.2e-09 68.2 275 26.9
AUR62040933 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.6e-09 67.0 64 56.2
AUR62000844 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.7e-08 64.3 295 26.1
EL10Ac4g09525 Beta vulgaris HOM05D000162 ORTHO05D000090 2.9e-08 63.5 133 29.3
EL10Ac4g09526 Beta vulgaris HOM05D000162 ORTHO05D003288 2.9e-08 63.5 133 29.3
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 3.7e-08 63.2 69 40.6
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 4.9e-08 62.8 193 26.9
BcaC04g20649 Brassica carinata HOM05D000162 ORTHO05D003288 6.4e-08 62.4 124 37.1
arahy.Tifrunner.gnm1.ann1.3K1SXW Arachis hypogaea HOM05D000162 ORTHO05D000090 1.4e-07 61.2 120 33.3
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 4.1e-07 59.7 94 29.8
RcHm_v2.0_Chr5g0074961 Rosa chinensis HOM05D009709 ORTHO05D003288 4.1e-07 59.7 66 42.4
AUR62006890 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.4e-07 59.3 67 43.3
arahy.Tifrunner.gnm1.ann1.GSB1YL Arachis hypogaea HOM05D008100 ORTHO05D009715 1.2e-06 58.2 99 48.5
PSO675G6037 Papaver somniferum HOM05D010315 ORTHO05D011532 2.0e-06 57.4 170 20.0
Migut.F00854 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.7e-06 57.0 116 31.9
BraA10t43029Z Brassica rapa HOM05D000162 ORTHO05D000090 3.5e-06 56.6 128 25.8
AUR62000614 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.5e-06 56.6 133 36.8
CsaV3_1G010760 Cucumis sativus L. HOM05D002890 ORTHO05D000003 3.5e-06 56.6 169 23.1
EL10Ac4g09408 Beta vulgaris HOM05D000162 ORTHO05D000090 5.9e-06 55.8 61 44.3
EL10Ac4g09806 Beta vulgaris HOM05D000162 ORTHO05D000090 7.8e-06 55.5 51 52.9
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 7.8e-06 55.5 61 39.3


User provided reference genes

Program Settings