Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 3.8e-307 1057.4 538 100.0
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.5e-247 859.4 539 84.0
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 1.4e-205 719.9 542 70.3
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 3.7e-129 466.1 540 48.3
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 2.2e-126 456.8 555 47.9
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 9.4e-125 451.4 558 49.3
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 4.4e-122 442.6 559 45.8
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 9.1e-120 434.9 523 50.3
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 5.9e-119 432.2 555 46.3
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 6.6e-118 428.7 559 44.7
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 1.5e-117 427.6 555 45.2
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 9.5e-117 424.9 550 47.5
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 3.6e-116 422.9 543 47.0
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.0e-115 421.4 554 45.3
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 6.8e-115 418.7 518 46.5
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 8.9e-115 418.3 555 44.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.2e-114 417.9 587 43.6
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 5.7e-114 415.6 531 47.5
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.9e-113 413.3 556 44.6
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.9e-113 413.3 572 44.9
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 4.9e-113 412.5 543 47.3
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 4.9e-113 412.5 531 45.0
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.3e-113 412.1 566 45.6
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.4e-112 411.0 541 46.4
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 5.4e-112 409.1 549 46.4
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 7.0e-112 408.7 557 45.1
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.6e-111 406.0 560 46.1
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 1.7e-110 404.1 525 46.9
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 5.0e-110 402.5 551 44.8
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 5.0e-110 402.5 543 45.5
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 8.6e-110 401.7 552 44.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 7.3e-109 398.7 537 45.3
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 7.3e-109 398.7 547 44.1
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 9.5e-109 398.3 543 45.3
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.6e-108 397.5 557 43.8
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 2.1e-108 397.1 555 44.5
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 6.2e-108 395.6 550 44.2
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.4e-107 394.4 537 46.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.0e-107 392.9 554 45.7
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 5.2e-107 392.5 585 41.9
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 6.8e-107 392.1 558 44.1
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.3e-105 387.9 486 47.7
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.2e-105 387.1 559 43.3
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 3.7e-105 386.3 546 42.9
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 3.7e-105 386.3 550 42.9
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 8.3e-105 385.2 546 42.7
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.1e-104 384.8 576 42.4
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.1e-104 384.8 550 43.3
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 3.2e-104 383.3 550 43.3
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 4.1e-104 382.9 582 42.4
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 7.0e-104 382.1 546 41.9
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 9.2e-104 381.7 539 43.6
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.2e-103 381.3 511 46.2
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 2.7e-103 380.2 552 42.0
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 1.3e-102 377.9 560 42.3
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 1.3e-102 377.9 560 42.3
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 2.3e-102 377.1 560 43.6
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.9e-101 374.0 554 41.3
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 5.6e-101 372.5 557 41.3
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 5.6e-101 372.5 461 46.4
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.3e-101 372.1 508 43.9
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.6e-100 370.9 464 46.1
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.6e-100 369.8 560 40.5
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 4.0e-99 366.3 560 41.8
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 6.8e-99 365.5 493 45.6
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 1.2e-98 364.8 557 40.0
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.9e-96 357.5 550 40.5
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 7.1e-96 355.5 544 42.5
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 8.1e-92 342.0 536 40.9
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 9.9e-90 335.1 371 52.3
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.7e-89 334.3 410 45.9
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 1.6e-84 317.8 562 37.7
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.1e-84 317.4 369 46.6
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.1e-80 305.1 460 40.0
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 5.4e-80 302.8 382 44.2
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 7.3e-77 292.4 370 48.6
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.9e-75 285.8 459 38.1
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 2.2e-73 280.8 381 45.7
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 8.4e-73 278.9 456 39.3
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.2e-68 262.7 552 35.1
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.4e-67 261.5 269 55.0
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.5e-63 246.9 375 42.1
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 5.0e-49 199.9 532 30.8
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.9e-48 198.0 374 37.7
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.4e-32 145.2 188 46.8
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 2.0e-26 124.8 123 54.5
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 8.8e-14 82.8 197 31.5
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 8.8e-14 82.8 127 43.3
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 5.9e-10 70.1 155 31.6
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 6.8e-06 56.6 165 29.1


User provided reference genes

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