Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005260 Chenopodium quinoa HOM05D000162 ORTHO05D003288 9.3e-72 275.0 413 100.0
AUR62000710 Chenopodium quinoa HOM05D000162 ORTHO05D003288 8.2e-52 208.8 116 87.9
AUR62000666 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.3e-51 206.1 115 87.0
AUR62000649 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.8e-49 199.9 111 86.5
AUR62000678 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.9e-48 197.6 116 81.9
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 1.9e-48 197.6 110 87.3
AUR62005214 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.6e-47 193.0 112 83.9
AUR62000650 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.0e-46 190.3 116 81.9
AUR62000665 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.1e-46 189.5 116 81.0
AUR62000691 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.1e-45 188.3 116 81.0
AUR62000690 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.7e-45 186.0 105 86.7
AUR62000680 Chenopodium quinoa HOM05D000162 ORTHO05D003288 7.4e-45 185.7 107 84.1
AUR62017647 Chenopodium quinoa HOM05D000162 ORTHO05D003288 7.4e-45 185.7 112 79.5
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 9.7e-45 185.3 106 84.9
AUR62005276 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.7e-42 175.6 116 75.9
AUR62005303 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.0e-41 175.3 113 77.0
AUR62007002 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.1e-40 171.8 114 77.2
AUR62005306 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.7e-39 166.4 113 72.6
AUR62005305 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.8e-38 162.2 116 71.6
AUR62005251 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.3e-37 160.2 116 70.7
AUR62005167 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.7e-37 158.7 115 69.6
AUR62005284 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.5e-33 145.6 85 85.9
AUR62005308 Chenopodium quinoa HOM05D000162 ORTHO05D003288 4.2e-32 143.3 103 70.9
EL10Ac4g09866 Beta vulgaris HOM05D000162 ORTHO05D000090 2.8e-28 130.6 112 58.0
AUR62005290 Chenopodium quinoa HOM05D000162 ORTHO05D003288 8.5e-25 119.0 71 80.3
AUR62040933 Chenopodium quinoa HOM05D000162 ORTHO05D003288 9.4e-24 115.5 64 87.5
AUR62004849 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.2e-20 104.4 116 51.7
AUR62000711 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.4e-19 100.9 111 52.3
Ah.06g190010 Amaranthus hybridus HOM05D000162 ORTHO05D000090 3.5e-18 97.1 70 68.6
AUR62000700 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.3e-17 95.1 80 62.5
EL10Ac4g09525 Beta vulgaris HOM05D000162 ORTHO05D000090 2.9e-17 94.0 100 43.0
EL10Ac4g09526 Beta vulgaris HOM05D000162 ORTHO05D003288 2.9e-17 94.0 100 43.0
EL10Ac4g09814 Beta vulgaris HOM05D000162 ORTHO05D000090 5.0e-17 93.2 82 56.1
AUR62000669 Chenopodium quinoa HOM05D000162 ORTHO05D003288 8.5e-17 92.4 52 84.6
AUR62006890 Chenopodium quinoa HOM05D000162 ORTHO05D003288 7.2e-16 89.4 91 45.1
AUR62000679 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.1e-15 86.3 110 47.3
AUR62000844 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.0e-14 85.5 113 38.9
AUR62000354 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.8e-14 84.7 90 46.7
FAN05G4416 Fragaria x ananassa HOM05D009709 ORTHO05D003288 3.7e-12 77.0 80 43.8
EL10Ac4g09836 Beta vulgaris HOM05D000162 ORTHO05D003288 6.3e-12 76.3 77 48.1
AUR62000614 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.3e-12 76.3 98 38.8
AUR62005267 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.3e-12 76.3 38 94.7
AUR62005307 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.4e-11 75.1 38 94.7
BraA10t43029Z Brassica rapa HOM05D000162 ORTHO05D000090 3.1e-11 73.9 111 35.1
AUR62000760 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.2e-10 72.0 38 92.1
AUR62000692 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.6e-10 71.6 38 89.5
AUR62000667 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.0e-10 71.2 38 86.8
EL10Ac4g09408 Beta vulgaris HOM05D000162 ORTHO05D000090 4.5e-10 70.1 71 46.5
A09p64860 Brassica napus HOM05D000162 ORTHO05D003288 1.3e-09 68.6 111 33.3
RcHm_v2.0_Chr5g0074181 Rosa chinensis HOM05D009709 ORTHO05D003288 1.3e-09 68.6 89 38.2
AUR62000699 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.7e-09 68.2 38 84.2
Migut.F00854 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.7e-09 68.2 94 40.4
TAR362G0788 Trochodendron aralioides HOM05D000162 ORTHO05D003288 1.7e-09 68.2 94 39.4
AUR62040932 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.3e-09 67.8 38 86.8
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 2.9e-09 67.4 97 33.0
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.9e-09 67.4 81 40.7
EL10Ac4g09725 Beta vulgaris HOM05D000162 ORTHO05D000090 2.5e-08 64.3 51 60.8
arahy.Tifrunner.gnm1.ann1.M2HM0V Arachis hypogaea HOM05D018308 ORTHO05D003288 3.3e-08 63.9 86 34.9
Nitab4.5_0000956g0130 Nicotiana tabacum HOM05D011051 ORTHO05D003288 3.3e-08 63.9 84 40.5
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 4.3e-08 63.5 38 78.9
EL10Ac4g09780 Beta vulgaris HOM05D000162 ORTHO05D000090 5.6e-08 63.2 51 60.8
AUR62000378 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.6e-08 63.2 78 38.5
arahy.Tifrunner.gnm1.ann1.U8UX16 Arachis hypogaea HOM05D000239 ORTHO05D009715 9.5e-08 62.4 78 43.6
Nitab4.5_0000428g0460 Nicotiana tabacum HOM05D011051 ORTHO05D003288 9.5e-08 62.4 67 40.3
vmacro13801 Vaccinium macrocarpon HOM05D026694 ORTHO05D003288 1.6e-07 61.6 64 43.8
EL10Ac4g09599 Beta vulgaris HOM05D000162 ORTHO05D000090 2.1e-07 61.2 38 71.1
EL10Ac4g09784 Beta vulgaris HOM05D000162 ORTHO05D000090 2.1e-07 61.2 35 80.0
Gorai.011G151100 Gossypium raimondii HOM05D000162 ORTHO05D003288 2.8e-07 60.8 60 50.0
Gorai.009G378000 Gossypium raimondii HOM05D009709 ORTHO05D003288 3.6e-07 60.5 75 40.0
RcHm_v2.0_Chr5g0074961 Rosa chinensis HOM05D009709 ORTHO05D003288 3.6e-07 60.5 74 40.5
arahy.Tifrunner.gnm1.ann1.KQ42YR Arachis hypogaea HOM05D018308 ORTHO05D003288 4.7e-07 60.1 98 37.8
BraA09t41588Z Brassica rapa HOM05D003784 ORTHO05D004345 4.7e-07 60.1 85 34.1
Potri.005G046050 Populus trichocarpa HOM05D009709 ORTHO05D003288 6.1e-07 59.7 74 36.5
Prupe.6G195700 Prunus persica HOM05D009709 ORTHO05D003288 6.1e-07 59.7 90 35.6
QL03p013262 Quercus lobata HOM05D000162 ORTHO05D000090 6.1e-07 59.7 79 34.2
Migut.M00051 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.0e-07 59.3 97 36.1
EL10Ac4g09683 Beta vulgaris HOM05D000162 ORTHO05D000090 1.4e-06 58.5 48 60.4
TAR628G1172 Trochodendron aralioides HOM05D006858 ORTHO05D008767 1.4e-06 58.5 96 27.1
EL10Ac4g09728 Beta vulgaris HOM05D000162 ORTHO05D000090 1.8e-06 58.2 38 68.4
EL10Ac4g09649 Beta vulgaris HOM05D000140 ORTHO05D000087 2.3e-06 57.8 43 62.8
AUR62006962 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.3e-06 57.8 37 70.3
FAN07G0501 Fragaria x ananassa HOM05D009709 ORTHO05D003288 2.3e-06 57.8 38 63.2
FAN11G2462 Fragaria x ananassa HOM05D009709 ORTHO05D003288 2.3e-06 57.8 80 36.2
BcaC04g19405 Brassica carinata HOM05D000162 ORTHO05D003288 3.0e-06 57.4 82 32.9
C09p56060 Brassica napus HOM05D000162 ORTHO05D003288 3.0e-06 57.4 82 32.9
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 3.0e-06 57.4 33 78.8
TPR.G9763 Trifolium pratense HOM05D008100 ORTHO05D009715 3.0e-06 57.4 88 35.2
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 4.0e-06 57.0 60 50.0
Duzib128G1161 Durio zibethinus HOM05D007552 ORTHO05D009397 4.0e-06 57.0 82 34.1
HanXRQChr07g0205001 Helianthus annuus HOM05D000162 ORTHO05D000090 4.0e-06 57.0 80 37.5
Ah.13g076900 Amaranthus hybridus HOM05D000162 ORTHO05D000090 5.2e-06 56.6 35 74.3
QL03p014360 Quercus lobata HOM05D000315 ORTHO05D000090 5.2e-06 56.6 52 57.7
SEGI_04314 Sequoiadendron giganteum HOM05D006156 ORTHO05D007699 5.2e-06 56.6 76 34.2
arahy.Tifrunner.gnm1.ann1.71CV4M Arachis hypogaea HOM05D014016 ORTHO05D009715 6.8e-06 56.2 44 59.1
AUR62005301 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.8e-06 56.2 34 73.5
Medtr1g091880 Medicago truncatula HOM05D008100 ORTHO05D009715 6.8e-06 56.2 78 38.5
Nitab4.5_0006390g0090 Nicotiana tabacum HOM05D011051 ORTHO05D003288 6.8e-06 56.2 48 45.8
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 8.9e-06 55.8 101 29.7
arahy.Tifrunner.gnm1.ann1.90GDKS Arachis hypogaea HOM05D008100 ORTHO05D009715 8.9e-06 55.8 66 42.4
arahy.Tifrunner.gnm1.ann1.U9N0YZ Arachis hypogaea HOM05D006858 ORTHO05D008767 8.9e-06 55.8 97 25.8
CiPaw.06G142100 Carya illinoinensis HOM05D006858 ORTHO05D008767 8.9e-06 55.8 82 34.1
Glyma.07G102000 Glycine max HOM05D010072 ORTHO05D011797 8.9e-06 55.8 35 68.6
Nn4g22909 Nelumbo nucifera HOM05D006858 ORTHO05D008767 8.9e-06 55.8 96 27.1
QL11p037400 Quercus lobata HOM05D006858 ORTHO05D008767 8.9e-06 55.8 102 25.5


User provided reference genes

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