Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 2.3e-179 632.1 315 100.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 8.5e-134 480.7 294 84.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 2.1e-124 449.5 315 74.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 2.7e-111 406.0 328 62.5
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.2e-104 382.5 313 64.2
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 3.3e-101 372.5 317 60.6
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 3.3e-101 372.5 324 59.3
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 5.6e-101 371.7 300 64.7
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 9.5e-101 370.9 274 69.7
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.2e-100 370.5 309 60.5
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.6e-100 370.2 317 60.3
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 2.1e-100 369.8 321 59.2
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 3.6e-100 369.0 318 59.7
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 4.7e-100 368.6 324 59.6
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 1.1e-99 367.5 308 59.1
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.8e-99 366.7 321 58.6
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 6.8e-99 364.8 307 60.6
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 8.9e-99 364.4 334 56.6
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 1.2e-98 364.0 305 60.3
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 3.4e-98 362.5 310 59.0
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 4.4e-98 362.1 329 58.4
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 5.8e-98 361.7 302 61.9
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 1.3e-97 360.5 308 57.8
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.9e-97 359.4 334 56.9
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.9e-97 359.4 324 57.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 3.7e-97 359.0 325 57.5
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 4.9e-97 358.6 324 58.0
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 6.4e-97 358.2 308 59.7
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 6.4e-97 358.2 328 56.7
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 8.3e-97 357.8 332 57.5
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 1.4e-96 357.1 320 58.4
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.4e-96 356.3 316 60.1
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 4.1e-96 355.5 328 57.0
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 9.2e-96 354.4 309 59.9
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 9.2e-96 354.4 320 57.8
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 9.2e-96 354.4 333 58.6
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.2e-95 354.0 324 55.9
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 2.0e-95 353.2 311 56.9
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.0e-95 353.2 311 58.8
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 2.7e-95 352.8 325 57.8
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 7.8e-95 351.3 302 58.9
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 7.8e-95 351.3 324 55.6
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 1.0e-94 350.9 322 57.5
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.3e-94 350.5 323 57.6
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.3e-94 349.7 310 57.1
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.3e-94 349.7 319 56.1
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 3.9e-94 349.0 302 58.6
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 1.1e-93 347.4 321 57.6
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 1.1e-93 347.4 318 55.7
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 1.1e-93 347.4 318 55.7
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.9e-93 346.7 321 57.9
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 1.9e-93 346.7 318 56.6
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 2.5e-93 346.3 317 56.5
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 4.3e-93 345.5 318 56.0
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 4.3e-93 345.5 300 59.0
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.6e-93 345.1 318 56.6
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 5.6e-93 345.1 319 58.3
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 9.5e-93 344.4 322 56.2
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 9.5e-93 344.4 332 57.2
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 9.5e-93 344.4 318 58.2
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 1.2e-92 344.0 318 55.7
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 1.2e-92 344.0 319 57.1
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.6e-92 343.6 317 55.5
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.8e-92 342.8 323 56.7
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.8e-92 342.8 312 58.3
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.8e-92 342.8 313 58.1
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.8e-92 342.8 318 57.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.6e-92 342.4 300 59.3
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 4.7e-92 342.0 324 56.5
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.4e-91 340.5 318 56.0
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 2.3e-91 339.7 319 55.5
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.3e-89 334.0 323 55.1
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-89 334.0 283 61.1
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 4.9e-89 332.0 329 54.4
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 5.4e-88 328.6 318 56.0
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 4.6e-87 325.5 316 53.5
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 4.6e-87 325.5 322 55.3
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 7.8e-87 324.7 323 56.0
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 1.7e-86 323.6 323 54.5
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 2.3e-86 323.2 302 53.6
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 3.0e-86 322.8 323 55.4
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.0e-86 322.8 320 55.0
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.0e-86 322.8 320 55.0
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 3.0e-86 322.8 321 55.1
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 6.6e-86 321.6 292 56.8
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 2.8e-84 316.2 324 54.6
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 8.1e-84 314.7 315 52.4
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.4e-83 313.9 274 59.9
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 3.1e-83 312.8 282 58.2
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 8.9e-83 311.2 225 67.1
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 8.4e-81 304.7 277 55.6
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 4.1e-80 302.4 298 55.7
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 2.1e-79 300.1 313 50.5
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 6.0e-79 298.5 335 49.0
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 2.3e-78 296.6 289 54.7
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 4.9e-73 278.9 293 50.9
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.4e-72 277.3 259 56.4
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 2.7e-71 273.1 317 47.9
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.0e-70 271.2 306 48.4
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.4e-64 250.0 271 53.1
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 3.0e-62 243.0 184 64.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 4.8e-60 235.7 186 64.0
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 4.0e-59 232.6 191 63.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 2.2e-57 226.9 189 62.4
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 6.7e-54 215.3 306 41.8
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.9e-53 213.8 320 40.0
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.3e-52 211.1 290 41.7
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 8.2e-52 208.4 302 41.1
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 1.1e-51 208.0 184 57.1
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 4.9e-49 199.1 357 34.5
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 2.9e-41 173.3 157 52.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.4e-40 171.0 329 35.6
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 2.1e-39 167.2 255 36.1
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.4e-35 154.5 269 35.7
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 3.1e-35 153.3 150 57.3
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.2e-24 115.5 112 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 6.5e-17 92.4 89 47.2
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 8.2e-12 75.5 115 44.3
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 1.8e-11 74.3 137 36.5
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 8.0e-07 58.9 41 70.7
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.4e-06 58.2 33 69.7


User provided reference genes

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