Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004986 Chenopodium quinoa HOM05D006905 ORTHO05D003398 2.0e-49 198.7 96 100.0
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 2.9e-32 141.7 88 73.9
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 3.7e-32 141.4 86 75.6
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 8.3e-32 140.2 91 72.5
Ah.06g192620 Amaranthus hybridus HOM05D000416 ORTHO05D000322 4.1e-31 137.9 72 81.9
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 2.0e-25 119.0 70 68.6
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 2.0e-25 119.0 72 69.4
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 2.6e-25 118.6 73 68.5
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 7.5e-25 117.1 69 71.0
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 7.5e-25 117.1 67 73.1
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 1.3e-24 116.3 84 63.1
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 1.3e-24 116.3 72 62.5
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 1.7e-24 115.9 69 71.0
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 2.9e-24 115.2 69 66.7
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 2.9e-24 115.2 67 73.1
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 3.7e-24 114.8 70 64.3
Oeu023372.2 Olea europaea HOM05D006905 ORTHO05D003398 3.7e-24 114.8 72 61.1
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 3.7e-24 114.8 68 70.6
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 4.9e-24 114.4 65 70.8
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 6.4e-24 114.0 70 68.6
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 6.4e-24 114.0 69 71.0
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 8.3e-24 113.6 73 65.8
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 8.3e-24 113.6 70 68.6
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.4e-23 112.8 68 69.1
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 2.4e-23 112.1 64 75.0
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 2.4e-23 112.1 68 69.1
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.4e-23 112.1 68 69.1
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.2e-23 111.7 68 69.1
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 4.1e-23 111.3 67 67.2
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 4.1e-23 111.3 68 67.6
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 4.1e-23 111.3 73 65.8
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 5.4e-23 110.9 68 69.1
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 9.2e-23 110.2 83 59.0
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 9.2e-23 110.2 83 59.0
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 9.2e-23 110.2 69 66.7
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 9.2e-23 110.2 68 67.6
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 1.6e-22 109.4 75 60.0
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 2.1e-22 109.0 68 67.6
Cc02_g31650 Coffea canephora HOM05D006905 ORTHO05D003398 4.6e-22 107.8 75 54.7
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 6.0e-22 107.5 70 62.9
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 1.0e-21 106.7 71 64.8
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 1.0e-21 106.7 70 60.0
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 1.3e-21 106.3 82 57.3
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 1.3e-21 106.3 69 60.9
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 1.3e-21 106.3 69 60.9
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 1.3e-21 106.3 67 67.2
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 2.3e-21 105.5 64 68.8
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 2.3e-21 105.5 88 53.4
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 2.3e-21 105.5 70 61.4
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 3.0e-21 105.1 60 73.3
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 3.0e-21 105.1 69 56.5
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 6.6e-21 104.0 68 61.8
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 6.6e-21 104.0 68 63.2
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 8.6e-21 103.6 60 71.7
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 8.6e-21 103.6 68 60.3
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 1.1e-20 103.2 60 70.0
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 1.1e-20 103.2 66 62.1
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 1.1e-20 103.2 82 57.3
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 1.9e-20 102.4 68 60.3
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 1.9e-20 102.4 68 60.3
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 1.9e-20 102.4 67 58.2
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 3.3e-20 101.7 68 61.8
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 4.3e-20 101.3 73 53.4
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 4.3e-20 101.3 66 60.6
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 5.6e-20 100.9 69 58.0
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 7.3e-20 100.5 58 74.1
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 9.5e-20 100.1 60 70.0
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 1.2e-19 99.8 65 64.6
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 1.6e-19 99.4 72 54.2
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 1.6e-19 99.4 60 66.7
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 4.7e-19 97.8 62 67.7
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 4.7e-19 97.8 82 53.7
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 6.2e-19 97.4 68 58.8
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 1.1e-18 96.7 54 75.9
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 2.3e-18 95.5 82 52.4
Hma1.2p1_0083F.1_g042790 Hydrangea macrophylla HOM05D006905 ORTHO05D003398 3.1e-18 95.1 68 57.4
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 3.1e-18 95.1 68 58.8
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 3.1e-18 95.1 83 49.4
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 6.8e-18 94.0 68 57.4
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 6.8e-18 94.0 61 67.2
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 1.5e-17 92.8 65 58.5
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 1.5e-17 92.8 65 58.5
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 2.0e-17 92.4 60 61.7
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 2.6e-17 92.0 57 64.9
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 2.6e-17 92.0 57 64.9
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 4.4e-17 91.3 59 61.0
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 4.4e-17 91.3 59 61.0
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 5.8e-17 90.9 57 63.2
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 5.8e-17 90.9 57 63.2
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 7.6e-17 90.5 57 61.4
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 9.9e-17 90.1 57 63.2
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 1.4e-15 86.3 67 43.3
HanXRQChr06g0176711 Helianthus annuus HOM05D006905 ORTHO05D003398 3.5e-14 81.6 54 57.4
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 6.0e-14 80.9 57 56.1
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 3.9e-13 78.2 88 48.9
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 4.0e-10 68.2 43 60.5
SMO146G0019 Selaginella moellendorffii HOM05D006905 ORTHO05D003398 2.6e-09 65.5 58 48.3
SMO358G0422 Selaginella moellendorffii HOM05D007525 ORTHO05D003398 4.4e-09 64.7 63 44.4
Mapoly0153s0018 Marchantia polymorpha HOM05D007525 ORTHO05D003398 1.3e-08 63.2 62 43.5
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 8.4e-08 60.5 55 45.5
Pp3c2_27980 Physcomitrium patens HOM05D006905 ORTHO05D003398 1.1e-07 60.1 53 52.8
Pp3c4_17920 Physcomitrium patens HOM05D007525 ORTHO05D003398 3.2e-07 58.5 59 42.4
CBR_g31994 Chara braunii HOM05D007525 ORTHO05D003398 1.6e-06 56.2 59 39.0
CBR_g23482 Chara braunii HOM05D006905 ORTHO05D003398 2.1e-06 55.8 57 45.6
Aqoxy7G00302 Aquilegia oxysepala HOM05D007525 ORTHO05D003398 4.6e-06 54.7 60 36.7


User provided reference genes

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