Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.0e-163 577.0 288 100.0
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 2.3e-109 399.4 299 69.9
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.5e-97 360.1 257 76.7
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 5.6e-92 341.7 306 60.8
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 3.8e-80 302.4 264 60.2
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.1e-76 290.8 317 55.2
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 5.7e-76 288.5 248 60.1
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 2.2e-75 286.6 303 55.1
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 4.1e-74 282.3 279 55.9
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 6.9e-74 281.6 283 54.4
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 2.6e-73 279.6 285 51.9
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 3.4e-73 279.3 294 51.0
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 5.9e-73 278.5 255 59.2
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 7.7e-73 278.1 251 59.0
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 1.3e-72 277.3 296 54.1
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 1.7e-72 276.9 279 54.8
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 2.2e-72 276.6 284 52.5
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 5.0e-72 275.4 234 60.3
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 5.0e-72 275.4 223 61.4
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 6.5e-72 275.0 216 64.4
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 8.5e-72 274.6 279 54.8
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.4e-71 273.9 292 51.0
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 5.5e-71 271.9 288 51.4
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 5.5e-71 271.9 284 51.4
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 7.2e-71 271.6 312 47.4
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 9.4e-71 271.2 298 52.7
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 9.4e-71 271.2 266 56.0
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 9.4e-71 271.2 219 61.6
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 1.2e-70 270.8 223 62.3
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 2.1e-70 270.0 219 61.6
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.1e-70 270.0 296 50.3
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 2.1e-70 270.0 234 57.3
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 2.7e-70 269.6 287 52.3
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.7e-70 269.6 224 60.3
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 2.7e-70 269.6 237 58.2
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 3.6e-70 269.2 222 61.7
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 3.6e-70 269.2 216 61.6
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 3.6e-70 269.2 220 62.3
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 4.6e-70 268.9 221 58.4
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 6.1e-70 268.5 213 61.0
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 6.1e-70 268.5 224 60.7
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 6.1e-70 268.5 257 53.7
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.4e-69 267.3 224 59.8
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 1.8e-69 266.9 221 58.8
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.8e-69 266.9 237 59.1
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.3e-69 266.5 296 50.0
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 2.3e-69 266.5 219 58.9
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 2.3e-69 266.5 281 51.6
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 3.0e-69 266.2 216 60.6
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 3.9e-69 265.8 285 51.9
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.9e-69 265.8 255 56.9
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 3.9e-69 265.8 300 51.0
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 3.9e-69 265.8 300 51.0
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 5.1e-69 265.4 235 58.7
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 5.1e-69 265.4 222 61.3
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 6.7e-69 265.0 300 52.7
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 8.8e-69 264.6 228 59.2
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 8.8e-69 264.6 232 57.8
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.1e-68 264.2 221 59.3
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 1.1e-68 264.2 222 59.5
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 1.5e-68 263.8 286 49.7
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 2.0e-68 263.5 220 60.0
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 2.6e-68 263.1 224 58.9
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 3.3e-68 262.7 303 48.2
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 3.3e-68 262.7 227 58.1
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 4.4e-68 262.3 305 49.5
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 4.4e-68 262.3 229 58.1
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 5.7e-68 261.9 226 59.7
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 5.7e-68 261.9 252 54.8
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 1.3e-67 260.8 299 49.2
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 1.3e-67 260.8 213 60.6
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 1.7e-67 260.4 249 56.6
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.7e-67 260.4 212 61.3
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 2.2e-67 260.0 298 49.3
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 6.3e-67 258.5 250 52.8
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 8.2e-67 258.1 228 58.8
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 8.2e-67 258.1 260 53.1
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 8.2e-67 258.1 253 53.0
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 1.8e-66 256.9 248 55.2
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.8e-66 256.9 287 50.2
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 1.8e-66 256.9 242 55.8
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 2.4e-66 256.5 225 58.2
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 2.4e-66 256.5 224 59.8
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 2.4e-66 256.5 227 56.8
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 3.1e-66 256.1 221 57.0
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 5.3e-66 255.4 300 47.7
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 5.3e-66 255.4 249 55.0
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 6.9e-66 255.0 222 57.2
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 9.1e-66 254.6 210 57.1
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 2.6e-65 253.1 212 58.0
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.4e-65 252.7 254 52.4
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 4.5e-65 252.3 265 49.8
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.0e-64 251.1 225 56.4
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 2.2e-64 250.0 262 49.6
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 2.2e-64 250.0 211 59.7
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 2.9e-64 249.6 216 57.9
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 3.8e-64 249.2 262 49.6
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 3.8e-64 249.2 262 49.6
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.0e-64 248.8 212 58.5
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 6.5e-64 248.4 252 52.4
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 1.1e-63 247.7 225 56.0
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.1e-63 247.7 217 57.6
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 1.9e-63 246.9 280 50.0
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 1.9e-63 246.9 220 57.7
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 5.5e-63 245.4 187 62.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.1e-62 243.4 218 58.7
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 2.1e-62 243.4 199 60.3
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 1.0e-61 241.1 247 53.4
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.8e-61 238.0 231 57.6
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.5e-60 237.3 334 42.8
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 7.4e-60 235.0 278 46.8
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 2.2e-51 206.8 297 44.1
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.3e-51 205.3 180 60.0
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.1e-50 204.5 219 48.9
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.6e-49 200.7 110 78.2
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 2.7e-49 199.9 399 35.1
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 3.2e-47 193.0 239 46.0
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 1.6e-46 190.7 194 53.1
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 2.1e-46 190.3 209 49.8
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 4.7e-46 189.1 180 55.0
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 6.1e-46 188.7 224 47.8
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.0e-45 186.4 118 72.9
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 6.8e-45 185.3 110 70.9
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 3.4e-44 183.0 111 76.6
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 3.1e-42 176.4 252 44.8
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 5.4e-42 175.6 165 51.5
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.3e-35 154.5 212 43.4
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 4.1e-34 149.4 105 58.1
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 7.0e-34 148.7 84 77.4
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 1.2e-30 137.9 215 40.9
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 1.0e-29 134.8 86 70.9
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 7.8e-25 118.6 98 52.0
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 2.8e-22 110.2 148 41.2
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 4.7e-22 109.4 133 44.4
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 6.2e-22 109.0 132 46.2
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 6.6e-16 89.0 115 45.2
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.0e-08 65.1 32 84.4
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 1.9e-07 60.8 154 33.8


User provided reference genes

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