Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004788 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.6e-56 219.9 100 100.0
AUR62041237 Chenopodium quinoa HOM05D009516 ORTHO05D010476 5.4e-50 200.7 96 92.7
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.2e-49 199.5 96 92.7
AUR62021541 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.3e-48 196.1 96 90.6
AUR62015848 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.3e-47 191.4 96 88.5
AUR62026517 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.1e-46 186.8 96 85.4
EL10Ac6g13764 Beta vulgaris HOM05D009516 ORTHO05D010476 4.4e-36 154.5 96 70.8
Ah.03g145030 Amaranthus hybridus HOM05D000107 ORTHO05D000568 5.6e-15 84.3 80 51.2
Ah.15g097390 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.3e-14 83.2 80 50.0
Ah.08g220140 Amaranthus hybridus HOM05D000107 ORTHO05D003213 4.8e-14 81.3 80 48.8
Ah.05g172280 Amaranthus hybridus HOM05D000107 ORTHO05D003213 6.2e-14 80.9 80 48.8
Ah.14g078660 Amaranthus hybridus HOM05D000107 ORTHO05D000568 1.8e-13 79.3 80 47.5
AUR62002722 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.6e-12 75.5 35 91.4
AUR62038710 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.8e-12 74.3 81 45.7
Ah.14g079910 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.0e-11 73.6 80 43.8
RhsimUnG0068500 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-10 68.9 81 37.0
CANSAT11G0105 Cannabis sativa HOM05D000107 ORTHO05D000062 2.7e-09 65.5 83 41.0
TPR.G34585 Trifolium pratense HOM05D000107 ORTHO05D000062 3.5e-09 65.1 82 37.8
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.0e-09 64.3 80 38.8
QL05p055903 Quercus lobata HOM05D000240 ORTHO05D003213 6.0e-09 64.3 82 40.2
QL04p009914 Quercus lobata HOM05D000107 ORTHO05D003213 7.9e-09 63.9 85 38.8
Rhsim10G0126500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-08 63.5 84 39.3
SHI50298 Sapria himalayana HOM05D000648 ORTHO05D000568 1.0e-08 63.5 100 32.0
CAN.G89.9 Capsicum annuum HOM05D000107 ORTHO05D000062 1.8e-08 62.8 97 36.1
ECA232G3917 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-08 62.4 85 41.2
ATR1201G001 Amborella trichopoda HOM05D000107 ORTHO05D003213 3.0e-08 62.0 83 39.8
CSS0020531 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 3.0e-08 62.0 98 36.7
CANSAT11G1794 Cannabis sativa HOM05D000107 ORTHO05D000062 3.0e-08 62.0 83 39.8
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-08 62.0 82 39.0
Rhsim01G0119700 Rhododendron simsii HOM05D000107 ORTHO05D003213 5.1e-08 61.2 81 37.0
CANSAT21G0908 Cannabis sativa HOM05D000107 ORTHO05D000062 8.7e-08 60.5 91 38.5
Oeu027214.1 Olea europaea HOM05D000107 ORTHO05D003213 1.1e-07 60.1 90 36.7
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-07 60.1 85 37.6
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-07 59.7 85 40.0
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-07 59.7 85 37.6
TWI81G0886 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.5e-07 59.7 93 34.4
CSS0007628 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.9e-07 59.3 85 38.8
CANSAT21G0166 Cannabis sativa HOM05D000107 ORTHO05D000062 3.3e-07 58.5 89 39.3
CANSAT21G2308 Cannabis sativa HOM05D000107 ORTHO05D000062 3.3e-07 58.5 89 39.3
CANSAT35G1642 Cannabis sativa HOM05D000107 ORTHO05D000062 3.3e-07 58.5 81 39.5
QL01p002857 Quercus lobata HOM05D000240 ORTHO05D003213 3.3e-07 58.5 73 41.1
QL04p081146 Quercus lobata HOM05D000107 ORTHO05D003213 3.3e-07 58.5 73 41.1
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-07 58.5 80 33.8
RhsimUnG0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-07 58.5 80 33.8
CANSAT54G2061 Cannabis sativa HOM05D000107 ORTHO05D000062 4.3e-07 58.2 81 40.7
CANSAT64G3014 Cannabis sativa HOM05D000107 ORTHO05D000062 4.3e-07 58.2 81 40.7
Oeu018272.1 Olea europaea HOM05D000107 ORTHO05D003213 4.3e-07 58.2 92 32.6
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-07 58.2 80 33.8
CANSAT01G1821 Cannabis sativa HOM05D000107 ORTHO05D000062 5.7e-07 57.8 81 39.5
CsaV3_7G011410 Cucumis sativus L. HOM05D000107 ORTHO05D003213 5.7e-07 57.8 85 37.6
CANSAT25G3769 Cannabis sativa HOM05D000107 ORTHO05D000062 7.4e-07 57.4 83 38.6
CANSAT56G1875 Cannabis sativa HOM05D009677 ORTHO05D011883 7.4e-07 57.4 80 36.2
CANSAT64G0367 Cannabis sativa HOM05D000107 ORTHO05D000062 7.4e-07 57.4 81 38.3
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 7.4e-07 57.4 83 38.6
Rhsim07G0185300 Rhododendron simsii HOM05D000107 ORTHO05D003213 9.6e-07 57.0 80 32.5
SHI49339 Sapria himalayana HOM05D000648 ORTHO05D000568 1.3e-06 56.6 86 31.4
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 1.6e-06 56.2 86 36.0
Atru.chr11.301 Acer truncatum HOM05D000107 ORTHO05D000062 1.6e-06 56.2 86 37.2
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 1.6e-06 56.2 86 36.0
CSS0002050 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.6e-06 56.2 91 35.2
CsaV3_1G024200 Cucumis sativus L. HOM05D000107 ORTHO05D000062 1.6e-06 56.2 85 36.5
CsaV3_1G031320 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.6e-06 56.2 85 36.5
CsaV3_6G019030 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.6e-06 56.2 85 36.5
CsaV3_6G032210 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.6e-06 56.2 85 36.5
SHI48108 Sapria himalayana HOM05D000648 ORTHO05D000568 1.6e-06 56.2 83 30.1
Oeu004802.1 Olea europaea HOM05D000107 ORTHO05D003213 2.1e-06 55.8 81 37.0
CANSAT25G3813 Cannabis sativa HOM05D054931 ORTHO05D003213 2.8e-06 55.5 87 32.2
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-06 55.5 83 34.9
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-06 55.1 80 37.5
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 3.7e-06 55.1 80 37.5
CANSAT21G1204 Cannabis sativa HOM05D000107 ORTHO05D000062 4.8e-06 54.7 81 38.3
CANSAT64G1316 Cannabis sativa HOM05D000107 ORTHO05D000062 4.8e-06 54.7 81 37.0
Hma1.2p1_0610F.1_g188590 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 4.8e-06 54.7 85 40.0
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-06 54.7 83 32.5
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.8e-06 54.7 80 35.0
Migut.O00078 Erythranthe guttata HOM05D000107 ORTHO05D000062 6.2e-06 54.3 83 33.7
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.2e-06 53.9 93 31.2


User provided reference genes

Program Settings