Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.5e-222 775.8 379 100.0
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 3.0e-210 734.9 407 89.9
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.8e-175 619.4 399 76.2
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 5.6e-156 554.7 406 67.7
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.3e-136 490.3 383 63.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 4.5e-129 465.3 407 57.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 4.6e-126 455.3 374 60.7
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 8.7e-125 451.1 384 58.6
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.6e-123 446.8 377 57.8
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.7e-123 445.7 408 56.9
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 6.2e-123 444.9 374 58.6
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 8.1e-123 444.5 377 59.2
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.4e-122 443.0 402 55.5
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 2.4e-122 443.0 403 54.6
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 5.3e-122 441.8 376 59.3
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 9.0e-122 441.0 378 58.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 1.5e-121 440.3 403 54.6
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.6e-121 439.5 404 54.7
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 5.8e-121 438.3 378 57.9
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.8e-121 438.3 368 59.0
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 5.8e-121 438.3 398 56.8
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 7.6e-121 438.0 377 57.3
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 9.9e-121 437.6 394 56.3
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 9.9e-121 437.6 409 55.3
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 9.9e-121 437.6 399 55.4
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.7e-120 436.8 394 57.1
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.7e-120 436.8 375 58.7
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.2e-120 436.4 375 58.7
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 2.9e-120 436.0 387 56.3
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.9e-120 436.0 413 54.5
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 3.8e-120 435.6 378 57.7
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 3.8e-120 435.6 372 57.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 8.4e-120 434.5 402 54.7
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.9e-119 433.3 376 57.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.2e-119 432.6 402 54.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.5e-119 431.8 423 51.5
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 7.9e-118 427.9 372 57.5
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 7.9e-118 427.9 387 57.1
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.3e-117 427.2 372 54.6
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.8e-117 426.8 374 58.3
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.3e-117 426.4 396 53.5
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 6.7e-117 424.9 395 54.9
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 8.7e-117 424.5 399 55.1
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 3.3e-116 422.5 380 57.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 4.3e-116 422.2 401 54.1
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 9.6e-116 421.0 382 56.8
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.3e-115 420.6 382 56.5
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.3e-115 420.6 375 56.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 3.7e-115 419.1 371 55.3
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 4.8e-115 418.7 376 56.1
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 4.8e-115 418.7 377 55.2
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.1e-114 417.5 376 55.9
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.4e-114 417.2 379 55.7
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 3.1e-114 416.0 377 54.6
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.2e-113 414.1 376 53.7
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.7e-112 410.2 377 54.4
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 6.5e-112 408.3 374 54.5
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.5e-111 406.4 380 55.5
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 4.2e-111 405.6 380 54.5
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 7.1e-111 404.8 367 59.4
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 7.9e-110 401.4 334 58.1
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.0e-109 401.0 377 54.4
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.3e-109 400.6 375 54.1
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 3.0e-109 399.4 374 52.9
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 3.0e-109 399.4 378 54.5
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 5.1e-109 398.7 378 54.2
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.9e-108 396.7 378 54.2
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.9e-108 396.7 378 54.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.9e-108 396.7 378 54.0
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 1.9e-108 396.7 380 52.4
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 9.7e-108 394.4 384 51.8
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 2.4e-106 389.8 385 53.0
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 1.2e-105 387.5 387 51.9
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.0e-105 386.7 401 50.4
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.0e-104 384.4 415 49.4
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 7.2e-103 378.3 397 50.6
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.1e-102 376.7 394 51.0
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 5.1e-101 372.1 424 49.5
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 8.2e-99 364.8 438 46.1
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 3.2e-95 352.8 294 59.2
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.2e-94 350.9 363 50.4
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.1e-92 344.4 288 57.6
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.1e-90 337.8 294 56.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 5.0e-88 328.9 347 51.0
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 6.5e-88 328.6 294 54.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 3.7e-83 312.8 286 51.7
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 5.3e-82 308.9 294 53.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 7.2e-71 271.9 310 43.5
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 5.2e-69 265.8 281 52.3
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.1e-66 258.1 229 55.9
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 4.5e-65 252.7 225 56.0
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.4e-58 230.3 274 43.8
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 3.1e-58 229.9 250 48.0
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 3.1e-58 229.9 204 55.4
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.7e-56 224.2 246 48.4
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-52 211.1 158 65.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.6e-52 210.3 210 49.0
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 6.6e-48 195.7 377 33.2
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 2.3e-45 187.2 153 59.5
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 9.5e-31 138.7 410 28.0
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 4.2e-26 123.2 81 65.4
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.5e-25 120.2 97 64.9
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.9e-24 116.7 134 44.8
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.2e-20 105.1 75 62.7
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.6e-17 94.7 144 35.4
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 2.1e-14 84.3 146 30.8
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 8.1e-14 82.4 74 52.7
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.2e-12 78.6 71 49.3
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 5.4e-10 69.7 67 49.3
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 5.4e-10 69.7 60 61.7
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.0e-08 63.9 199 27.1
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.1e-07 62.0 373 24.4
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.6e-06 58.2 52 57.7


User provided reference genes

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