Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.3e-65 253.1 144 100.0
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.2e-23 113.6 202 43.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 4.5e-13 78.6 171 37.4
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 6.4e-12 74.7 162 37.0
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 1.1e-11 73.9 173 35.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 1.4e-11 73.6 165 34.5
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.4e-11 72.8 160 35.6
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.2e-11 72.0 152 37.5
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 4.2e-11 72.0 152 37.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.4e-11 71.6 152 37.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 4.6e-10 68.6 154 36.4
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 7.9e-10 67.8 135 40.0
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.0e-09 67.4 172 33.1
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 6.7e-09 64.7 150 36.7
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 6.7e-09 64.7 150 36.7
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 6.7e-09 64.7 154 38.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 6.7e-09 64.7 158 35.4
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 1.1e-08 63.9 147 34.7
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.5e-08 63.5 152 34.2
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.5e-08 63.5 177 32.8
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.5e-08 63.5 147 34.0
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.5e-08 63.5 145 37.2
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.9e-08 63.2 149 38.3
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.9e-08 63.2 148 37.8
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.5e-08 62.8 151 36.4
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.3e-08 62.4 165 36.4
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 3.3e-08 62.4 160 33.1
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.6e-08 61.6 149 36.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 5.6e-08 61.6 150 36.0
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 7.4e-08 61.2 132 36.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 7.4e-08 61.2 148 34.5
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 7.4e-08 61.2 128 38.3
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 9.6e-08 60.8 153 36.6
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.3e-07 60.5 138 35.5
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.3e-07 60.5 151 34.4
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.1e-07 59.7 169 37.3
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.1e-07 59.7 145 35.2
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 3.7e-07 58.9 167 32.3
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 3.7e-07 58.9 153 34.6
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.8e-07 58.5 169 34.9
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 6.2e-07 58.2 156 34.6
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 8.1e-07 57.8 168 32.1
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 8.1e-07 57.8 171 34.5
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 8.1e-07 57.8 139 33.8
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.1e-06 57.4 189 33.9
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 1.1e-06 57.4 154 34.4
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.4e-06 57.0 164 32.9
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.8e-06 56.6 140 34.3
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.8e-06 56.6 162 32.7
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.8e-06 56.6 153 32.7
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.4e-06 56.2 169 34.3
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.4e-06 56.2 139 37.4
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.4e-06 56.2 146 37.0
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 4.0e-06 55.5 152 35.5
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 4.0e-06 55.5 137 32.8
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.3e-06 55.1 140 36.4
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 5.3e-06 55.1 154 35.7
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.9e-06 54.7 169 33.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 6.9e-06 54.7 140 36.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.0e-06 54.3 133 33.1
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 9.0e-06 54.3 153 34.6


User provided reference genes

Program Settings