Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004663 Chenopodium quinoa HOM05D005137 ORTHO05D006478 2.3e-93 345.5 171 100.0
AUR62023580 Chenopodium quinoa HOM05D005137 ORTHO05D006478 3.4e-60 235.3 171 73.7
Sc01g0001710 Simmondsia chinensis HOM05D005137 ORTHO05D006478 3.5e-57 225.3 172 70.9
Hund27077 Selenicereus undatus HOM05D005137 ORTHO05D006478 3.9e-56 221.9 170 67.6
Hund16805 Selenicereus undatus HOM05D005137 ORTHO05D006478 2.3e-53 212.6 172 65.1
EL10Ac1g00786 Beta vulgaris HOM05D005137 ORTHO05D006478 4.4e-52 208.4 170 62.9
CANSAT25G3131 Cannabis sativa HOM05D005137 ORTHO05D006478 9.2e-50 200.7 169 62.1
Gohir.A05G250700 Gossypium hirsutum HOM05D005137 ORTHO05D006478 4.6e-49 198.4 170 60.6
Dinv41687 Davidia involucrata HOM05D005137 ORTHO05D006478 6.0e-49 198.0 170 58.8
Eucgr.F04136 Eucalyptus grandis HOM05D005137 ORTHO05D006478 6.0e-49 198.0 175 58.9
Lj1g0006567 Lotus japonicus HOM05D005137 ORTHO05D006478 6.0e-49 198.0 164 62.2
Gohir.D05G253100 Gossypium hirsutum HOM05D005137 ORTHO05D006478 7.8e-49 197.6 170 60.0
THA.LOC104806781 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 7.8e-49 197.6 169 60.4
Manes.02G220500 Manihot esculenta HOM05D005137 ORTHO05D006478 1.0e-48 197.2 165 61.2
MSTRG.22441 Avicennia marina HOM05D005137 ORTHO05D006478 2.3e-48 196.1 170 58.8
Gorai.009G263900 Gossypium raimondii HOM05D005137 ORTHO05D006478 2.3e-48 196.1 170 59.4
Potri.019G085500 Populus trichocarpa HOM05D005137 ORTHO05D006478 3.0e-48 195.7 170 60.0
THA.LOC104813096 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 3.9e-48 195.3 165 61.2
Duzib177G1119 Durio zibethinus HOM05D005137 ORTHO05D006478 5.1e-48 194.9 169 59.8
Potri.013G114800 Populus trichocarpa HOM05D005137 ORTHO05D006478 5.1e-48 194.9 170 59.4
RcHm_v2.0_Chr6g0272201 Rosa chinensis HOM05D005137 ORTHO05D006478 5.1e-48 194.9 171 60.2
Thecc.08G201900 Theobroma cacao HOM05D005137 ORTHO05D006478 5.1e-48 194.9 170 60.0
TWI34G1514 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 6.6e-48 194.5 169 60.9
CANSAT64G0780 Cannabis sativa HOM05D005137 ORTHO05D006478 8.6e-48 194.1 169 60.4
COL.COLO4_35446 Corchorus olitorius HOM05D005137 ORTHO05D006478 8.6e-48 194.1 218 50.9
Glyma.16G156600 Glycine max HOM05D005137 ORTHO05D006478 8.6e-48 194.1 169 59.2
arahy.Tifrunner.gnm1.ann1.UQ6TGS Arachis hypogaea HOM05D005137 ORTHO05D006478 1.1e-47 193.7 165 61.2
Glyma.02G074600 Glycine max HOM05D005137 ORTHO05D006478 1.1e-47 193.7 169 59.2
Oeu039592.1 Olea europaea HOM05D005137 ORTHO05D006478 1.1e-47 193.7 169 59.8
Glyma.09G166500 Glycine max HOM05D005137 ORTHO05D006478 1.5e-47 193.4 175 58.3
Nn5g27795 Nelumbo nucifera HOM05D005137 ORTHO05D006478 1.5e-47 193.4 170 56.5
Oeu021007.1 Olea europaea HOM05D005137 ORTHO05D006478 1.5e-47 193.4 167 60.5
Psat5g109360 Pisum sativum HOM05D005137 ORTHO05D006478 1.5e-47 193.4 168 57.7
arahy.Tifrunner.gnm1.ann1.RF3N8D Arachis hypogaea HOM05D005137 ORTHO05D006478 1.9e-47 193.0 165 60.0
BolC8t47866H Brassica oleracea HOM05D005137 ORTHO05D006478 1.9e-47 193.0 180 56.7
Cpa.g.sc66.58 Carica papaya HOM05D005137 ORTHO05D006478 1.9e-47 193.0 170 57.6
Ca_16220_v3 Cicer arietinum L. HOM05D005137 ORTHO05D006478 1.9e-47 193.0 169 57.4
Prupe.8G054100 Prunus persica HOM05D005137 ORTHO05D006478 5.6e-47 191.4 169 60.4
GSVIVG01023270001 Vitis vinifera HOM05D005137 ORTHO05D006478 9.6e-47 190.7 169 56.8
CSS0049152 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.2e-46 190.3 165 60.6
Duzib116G0364 Durio zibethinus HOM05D005137 ORTHO05D006478 1.2e-46 190.3 170 57.6
Phvul.004G084500 Phaseolus vulgaris HOM05D005137 ORTHO05D006478 1.2e-46 190.3 169 58.0
TWI32G0414 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 1.6e-46 189.9 169 59.2
AL1G48900 Arabidopsis lyrata HOM05D005137 ORTHO05D006478 2.1e-46 189.5 167 60.5
BcaB03g13677 Brassica carinata HOM05D005137 ORTHO05D006478 2.8e-46 189.1 169 59.2
CSS0031544 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 3.6e-46 188.7 165 60.6
CSS0044586 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 3.6e-46 188.7 165 60.6
Sabra13G0097100 Salix brachista HOM05D005137 ORTHO05D006478 3.6e-46 188.7 170 57.6
Atru.chr13.1812 Acer truncatum HOM05D005137 ORTHO05D006478 4.7e-46 188.3 166 59.0
C06p11610 Brassica napus HOM05D005137 ORTHO05D006478 8.1e-46 187.6 169 59.2
CiPaw.15G082700 Carya illinoinensis HOM05D005137 ORTHO05D006478 8.1e-46 187.6 168 58.9
Migut.N03340 Erythranthe guttata HOM05D005137 ORTHO05D006478 8.1e-46 187.6 170 55.3
Sp1g29570 Schrenkiella parvula HOM05D005137 ORTHO05D006478 8.1e-46 187.6 167 59.9
SGA_v2.0_scaffold149G36609 Striga asiatica HOM05D005137 ORTHO05D006478 8.1e-46 187.6 165 60.0
Carub.0001s3248 Capsella rubella HOM05D005137 ORTHO05D006478 1.1e-45 187.2 167 59.9
Cfa018205 Carpinus fangiana HOM05D005137 ORTHO05D006478 1.1e-45 187.2 169 58.6
PGR004G0411 Punica granatum HOM05D005137 ORTHO05D006478 1.1e-45 187.2 171 57.3
Medtr3g078663 Medicago truncatula HOM05D005137 ORTHO05D006478 1.4e-45 186.8 169 56.8
TAR628G0708 Trochodendron aralioides HOM05D005137 ORTHO05D006478 1.4e-45 186.8 169 53.8
A08p08280 Brassica napus HOM05D005137 ORTHO05D006478 1.8e-45 186.4 167 59.3
BcaB07g33131 Brassica carinata HOM05D005137 ORTHO05D006478 3.1e-45 185.7 169 58.0
Thhalv10008956m.g Eutrema salsugineum HOM05D005137 ORTHO05D006478 3.1e-45 185.7 167 58.7
Lalb_Chr03g0035851 Lupinus albus HOM05D005137 ORTHO05D006478 3.1e-45 185.7 166 57.8
VMungo0464G1968 Vigna mungo HOM05D005137 ORTHO05D006478 3.1e-45 185.7 171 54.4
MD10G1046500 Malus domestica HOM05D005137 ORTHO05D006478 4.0e-45 185.3 169 59.2
MELO3C024753.2 Cucumis melo HOM05D005137 ORTHO05D006478 5.2e-45 184.9 169 56.8
Aa31LG6G8420 Aethionema arabicum HOM05D005137 ORTHO05D006478 6.8e-45 184.5 171 55.6
AT1G34350 Arabidopsis thaliana HOM05D005137 ORTHO05D006478 8.9e-45 184.1 165 59.4
CsaV3_2G035870 Cucumis sativus L. HOM05D005137 ORTHO05D006478 8.9e-45 184.1 169 56.8
Peaxi162Scf00020g02234 Petunia axillaris HOM05D005137 ORTHO05D006478 8.9e-45 184.1 169 56.8
CAN.G623.4 Capsicum annuum HOM05D005137 ORTHO05D006478 1.2e-44 183.7 169 57.4
Ciclev10002730m.g Citrus clementina HOM05D005137 ORTHO05D006478 1.2e-44 183.7 169 56.8
Haze_17904 Corylus avellana HOM05D005137 ORTHO05D006478 1.2e-44 183.7 185 54.1
SalBow6G2431 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.2e-44 183.7 169 57.4
SalBow6G5561 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.2e-44 183.7 169 57.4
BcaC08g43783 Brassica carinata HOM05D005137 ORTHO05D006478 1.5e-44 183.3 169 57.4
BolC6t36295H Brassica oleracea HOM05D005137 ORTHO05D006478 1.5e-44 183.3 169 57.4
MD05G1040400 Malus domestica HOM05D005137 ORTHO05D006478 1.5e-44 183.3 170 56.5
BcaC05g27759 Brassica carinata HOM05D005137 ORTHO05D006478 2.0e-44 183.0 169 56.8
C05p37550 Brassica napus HOM05D005137 ORTHO05D006478 2.0e-44 183.0 169 56.8
Sed0020054 Sechium edule HOM05D005137 ORTHO05D006478 2.0e-44 183.0 169 57.4
BraA08t32846Z Brassica rapa HOM05D005137 ORTHO05D006478 5.8e-44 181.4 188 53.2
Sopen08g021770 Solanum pennellii HOM05D005137 ORTHO05D006478 5.8e-44 181.4 165 57.6
PGSC0003DMG400033629 Solanum tuberosum HOM05D005137 ORTHO05D006478 5.8e-44 181.4 165 57.6
Solyc08g067830.3 Solanum lycopersicum HOM05D005137 ORTHO05D006478 1.7e-43 179.9 165 57.0
BolC5t32496H Brassica oleracea HOM05D005137 ORTHO05D006478 8.4e-43 177.6 188 52.1
FvH4_2g12231 Fragaria vesca HOM05D005137 ORTHO05D006478 8.4e-43 177.6 170 52.4
unitig_62.g23355 Utricularia gibba HOM05D005137 ORTHO05D006478 8.4e-43 177.6 173 55.5
Aqoxy5G03157 Aquilegia oxysepala HOM05D005137 ORTHO05D006478 1.1e-42 177.2 171 53.8
ClCG02G007860 Citrullus lanatus HOM05D005137 ORTHO05D006478 1.1e-42 177.2 167 56.3
ECA248G1561 Erigeron canadensis HOM05D005137 ORTHO05D006478 1.1e-42 177.2 167 53.3
FAN20G1842 Fragaria x ananassa HOM05D005137 ORTHO05D006478 1.1e-42 177.2 170 52.4
HanXRQChr01g0027021 Helianthus annuus HOM05D005137 ORTHO05D006478 1.1e-42 177.2 165 53.9
Lalb_Chr01g0009971 Lupinus albus HOM05D005137 ORTHO05D006478 1.1e-42 177.2 166 55.4
unitig_52.g17664 Utricularia gibba HOM05D005137 ORTHO05D006478 1.9e-42 176.4 170 53.5
PSO210G7193 Papaver somniferum HOM05D005137 ORTHO05D006478 4.2e-42 175.3 169 50.9
Zm00001eb174480 Zea mays HOM05D005137 ORTHO05D006478 4.2e-42 175.3 164 55.5
Cc10_g11140 Coffea canephora HOM05D005137 ORTHO05D006478 7.1e-42 174.5 167 53.9
Lsat_1_v5_gn_1_53501 Lactuca sativa HOM05D005137 ORTHO05D006478 9.3e-42 174.1 167 52.7
CDE05G2425 Ceratophyllum demersum HOM05D005137 ORTHO05D006478 3.5e-41 172.2 166 53.6
FAN27G0578 Fragaria x ananassa HOM05D005137 ORTHO05D006478 3.5e-41 172.2 170 51.2
PSO238G0018 Papaver somniferum HOM05D005137 ORTHO05D006478 4.6e-41 171.8 169 50.3
Os08g0104100 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 6.0e-41 171.4 165 53.3
HPP92_025038 Vanilla planifolia HOM05D005137 ORTHO05D006478 3.0e-40 169.1 168 51.2
Nitab4.5_0000125g0160 Nicotiana tabacum HOM05D005137 ORTHO05D006478 8.7e-40 167.5 170 53.5
DCAR_006419 Daucus carota HOM05D005137 ORTHO05D006478 1.9e-39 166.4 169 49.1
Nitab4.5_0006579g0080 Nicotiana tabacum HOM05D005137 ORTHO05D006478 7.3e-39 164.5 169 50.9
Medtr1g083990 Medicago truncatula HOM05D001444 ORTHO05D006478 2.1e-38 162.9 175 51.4
PSO063G4111 Papaver somniferum HOM05D005137 ORTHO05D006478 8.1e-38 161.0 176 47.7
ATR0584G018 Amborella trichopoda HOM05D005137 ORTHO05D006478 1.1e-37 160.6 167 53.3
CARHR033800 Cardamine hirsuta HOM05D005137 ORTHO05D006478 7.8e-33 144.4 141 55.3
Os05g0432500 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 5.1e-32 141.7 168 43.5
Rhsim06G0097400 Rhododendron simsii HOM05D005137 ORTHO05D006478 1.4e-29 133.7 120 57.5
Lj7P297T42 Lonicera japonica HOM05D005137 ORTHO05D006478 1.8e-29 133.3 76 84.2
FAN24G3447 Fragaria x ananassa HOM05D004393 ORTHO05D004897 4.5e-28 128.6 141 46.1
SEGI_32859 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 4.5e-28 128.6 179 42.5
SEGI_32911 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 4.5e-28 128.6 179 42.5
QL02p034100 Quercus lobata HOM05D005137 ORTHO05D006478 7.6e-28 127.9 91 67.0
CAN.G21.12 Capsicum annuum HOM05D005137 ORTHO05D006478 4.9e-27 125.2 97 63.9
Peaxi162Scf00105g01425 Petunia axillaris HOM05D005137 ORTHO05D006478 1.1e-26 124.0 84 70.2
AagrBONN_evm.TU.Sc2ySwM_117.1441 Anthoceros agrestis HOM05D005137 ORTHO05D006478 2.4e-26 122.9 169 43.2
Glyma.16G216600 Glycine max HOM05D005137 ORTHO05D006478 9.3e-26 120.9 72 79.2
Pp3c12_6500 Physcomitrium patens HOM05D005137 ORTHO05D006478 3.9e-24 115.5 175 37.1
arahy.Tifrunner.gnm1.ann1.T3MISZ Arachis hypogaea HOM05D005137 ORTHO05D006478 7.4e-23 111.3 66 78.8
Mapoly0118s0004 Marchantia polymorpha HOM05D005137 ORTHO05D006478 2.8e-22 109.4 175 38.3
SGA_v2.0_scaffold386G50489 Striga asiatica HOM05D005137 ORTHO05D006478 1.8e-21 106.7 90 64.4
SMO115G0137 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 1.2e-20 104.0 128 41.4
Actinidia32879 Actinidia chinensis HOM05D005137 ORTHO05D006478 3.2e-18 95.9 79 63.3
SMO304G0014 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 7.9e-17 91.3 167 36.5
BraA09t38756Z Brassica rapa HOM05D005137 ORTHO05D006478 1.3e-14 84.0 104 47.1
arahy.Tifrunner.gnm1.ann1.84LCSI Arachis hypogaea HOM05D005137 ORTHO05D013367 3.7e-14 82.4 46 82.6
Cre02.g142150 Chlamydomonas reinhardtii HOM05D005137 ORTHO05D006478 3.7e-14 82.4 129 40.3
arahy.Tifrunner.gnm1.ann1.T6GVNL Arachis hypogaea HOM05D005137 ORTHO05D006478 1.4e-13 80.5 51 74.5
Dinv30978 Davidia involucrata HOM05D005137 ORTHO05D006478 3.1e-13 79.3 92 43.5
QL02p034107 Quercus lobata HOM05D005137 ORTHO05D006478 4.1e-13 79.0 47 72.3
Lj7C297T10 Lonicera japonica HOM05D005137 ORTHO05D006478 1.0e-11 74.3 47 66.0
vmacro12499 Vaccinium macrocarpon HOM05D005137 ORTHO05D006478 2.9e-11 72.8 46 65.2
TPR.G27590 Trifolium pratense HOM05D005137 ORTHO05D006478 8.4e-11 71.2 47 61.7
arahy.Tifrunner.gnm1.ann1.A3G9LL Arachis hypogaea HOM05D005137 ORTHO05D006478 1.1e-10 70.9 42 83.3
Medtr2g069440 Medicago truncatula HOM05D003000 ORTHO05D003699 7.1e-10 68.2 49 69.4
MCO05G717 Micromonas commoda HOM05D005137 ORTHO05D006478 1.6e-09 67.0 131 32.8
SGA_v2.0_scaffold1053G53813 Striga asiatica HOM05D005137 ORTHO05D006478 1.0e-08 64.3 69 55.1
BcaB04g17880 Brassica carinata HOM05D005137 ORTHO05D006478 3.7e-06 55.8 28 82.1
Zm00001eb289230 Zea mays HOM05D005137 ORTHO05D006478 4.8e-06 55.5 46 52.2


User provided reference genes

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