Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 4.0e-96 354.8 177 100.0
EL10Ac1g00075 Beta vulgaris HOM05D007935 ORTHO05D007393 6.0e-52 208.0 143 73.4
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 1.2e-15 87.4 141 41.8
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 7.6e-15 84.7 183 38.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.4e-13 80.5 190 36.3
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 9.3e-13 77.8 175 35.4
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 9.3e-13 77.8 175 37.1
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 9.3e-13 77.8 169 33.7
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 2.1e-12 76.6 185 35.1
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.7e-12 76.3 185 33.0
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 1.0e-11 74.3 186 36.6
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.0e-11 74.3 186 33.9
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.3e-11 73.9 181 33.1
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.3e-11 73.2 178 36.0
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 6.7e-11 71.6 178 34.3
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 1.5e-10 70.5 182 36.3
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 4.3e-10 68.9 180 33.9
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 5.7e-10 68.6 192 35.4
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 7.4e-10 68.2 183 32.8
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 7.4e-10 68.2 169 36.7
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.8e-09 66.2 172 35.5
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 2.8e-09 66.2 189 35.4
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 8.2e-09 64.7 176 33.0
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 1.1e-08 64.3 184 35.3
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 1.8e-08 63.5 183 33.3
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.8e-08 63.5 167 32.3
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 4.1e-08 62.4 175 34.3
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 4.1e-08 62.4 172 34.9
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 4.1e-08 62.4 172 34.9
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 5.3e-08 62.0 176 32.4
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 9.0e-08 61.2 176 33.5
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 9.0e-08 61.2 177 32.8
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.0e-07 60.1 178 32.6
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.6e-07 59.7 177 33.3
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 3.4e-07 59.3 169 33.7
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 4.5e-07 58.9 179 32.4
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 4.5e-07 58.9 185 31.4
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 7.7e-07 58.2 180 30.6
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 7.7e-07 58.2 173 34.1
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.0e-06 57.8 178 33.1
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.3e-06 57.4 176 33.0
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 1.3e-06 57.4 174 32.8
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.7e-06 57.0 186 30.1
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.2e-06 56.6 173 30.6
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 2.2e-06 56.6 170 32.9
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 2.9e-06 56.2 171 32.7
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 2.9e-06 56.2 183 33.3
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 2.9e-06 56.2 159 34.6
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.9e-06 56.2 183 30.1
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 2.9e-06 56.2 170 32.9
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 5.0e-06 55.5 180 31.7
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 6.5e-06 55.1 188 31.4


User provided reference genes

Program Settings