Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 0.0e+00 1203.3 608 100.0
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 7.7e-309 1063.1 539 97.0
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 9.0e-249 863.6 610 74.9
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 3.3e-227 792.0 608 69.7
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.1e-205 719.5 526 70.7
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.0e-204 717.2 611 63.7
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.2e-203 713.8 627 64.4
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.7e-202 708.8 508 70.9
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 8.3e-202 707.6 569 65.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 1.1e-198 697.2 619 62.7
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.5e-198 696.8 636 60.5
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 5.5e-198 694.9 595 63.0
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 7.2e-198 694.5 620 62.1
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.8e-197 692.6 529 68.1
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.6e-197 692.2 545 66.1
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 3.6e-197 692.2 551 65.9
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.8e-196 689.9 591 64.0
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 2.3e-196 689.5 618 62.1
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 6.8e-196 688.0 613 59.9
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.2e-195 687.2 542 66.4
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.2e-195 687.2 513 69.0
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 4.4e-195 685.3 515 67.2
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 4.4e-195 685.3 623 59.9
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 3.7e-194 682.2 626 60.7
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 3.1e-193 679.1 476 72.7
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 3.1e-193 679.1 476 72.1
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 4.1e-193 678.7 610 61.0
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 5.4e-193 678.3 532 67.1
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 5.4e-193 678.3 622 59.5
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 9.2e-193 677.6 626 59.3
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.2e-192 677.2 596 62.2
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.6e-192 676.8 503 68.2
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 5.9e-192 674.9 453 74.4
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 7.8e-192 674.5 618 59.4
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 5.0e-191 671.8 618 61.0
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 5.0e-191 671.8 418 77.8
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 6.6e-191 671.4 477 71.1
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 6.6e-191 671.4 626 59.9
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 8.6e-191 671.0 588 60.5
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.1e-190 670.6 583 62.3
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.1e-190 670.6 517 67.5
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.9e-190 669.8 585 60.9
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 5.6e-190 668.3 590 61.7
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 9.5e-190 667.5 543 65.7
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 9.5e-190 667.5 527 65.5
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 1.2e-189 667.2 627 59.8
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 3.6e-189 665.6 524 64.1
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 8.0e-189 664.5 641 57.6
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.0e-188 664.1 630 59.0
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.0e-188 664.1 618 59.5
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 1.8e-188 663.3 619 58.6
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.8e-188 663.3 626 59.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.2e-187 660.6 568 62.0
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 2.0e-187 659.8 519 66.3
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.3e-186 657.1 531 63.1
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.3e-186 657.1 617 59.0
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.7e-186 656.8 504 64.9
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 4.9e-186 655.2 581 61.3
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 6.4e-186 654.8 533 64.9
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 3.2e-185 652.5 580 61.0
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.1e-185 652.1 573 61.8
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 4.1e-185 652.1 530 64.2
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.6e-184 650.2 516 65.1
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 3.5e-184 649.0 640 58.1
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.6e-184 648.7 656 57.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 7.8e-184 647.9 639 57.9
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.0e-183 647.5 505 66.7
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.7e-183 646.7 548 62.0
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 2.3e-183 646.4 627 58.5
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 6.6e-183 644.8 550 62.9
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 6.6e-183 644.8 506 66.4
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 8.6e-183 644.4 641 58.5
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 8.6e-183 644.4 592 58.3
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-182 644.0 581 59.0
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.5e-182 643.7 618 58.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.9e-182 643.3 585 59.8
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 2.5e-182 642.9 417 75.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.5e-182 642.9 562 60.9
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 3.3e-182 642.5 563 61.8
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.6e-182 641.7 419 74.2
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.6e-182 641.7 528 63.3
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 7.3e-182 641.3 446 71.3
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 7.3e-182 641.3 608 59.7
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 9.5e-182 641.0 438 71.2
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 8.0e-181 637.9 446 70.9
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 8.0e-181 637.9 506 65.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 1.8e-180 636.7 588 57.3
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.8e-180 636.7 613 58.9
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 2.3e-180 636.3 472 68.2
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 4.0e-180 635.6 508 64.0
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.2e-179 634.0 496 63.3
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 2.0e-179 633.3 407 75.2
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.6e-179 632.9 508 63.8
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 3.4e-179 632.5 570 60.2
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.4e-179 632.5 547 62.2
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 3.4e-179 632.5 557 61.4
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 4.4e-179 632.1 408 75.7
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.3e-178 630.6 604 59.8
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 1.3e-178 630.6 559 59.7
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.7e-178 630.2 523 62.0
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 4.9e-178 628.6 559 59.6
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 6.4e-178 628.2 477 67.7
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 8.3e-178 627.9 599 56.9
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.4e-177 627.1 496 63.3
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.4e-177 627.1 615 57.4
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.4e-177 627.1 614 57.5
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 4.1e-177 625.5 434 71.2
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 4.1e-177 625.5 408 74.8
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.2e-176 624.0 569 58.9
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.6e-176 623.6 623 56.2
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.0e-176 623.2 628 54.6
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.0e-176 623.2 582 59.5
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 2.7e-176 622.9 556 60.6
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 7.8e-176 621.3 482 67.6
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.7e-175 620.2 567 60.1
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-175 618.6 499 66.3
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 1.5e-174 617.1 438 69.4
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 8.1e-173 611.3 438 69.2
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.1e-172 610.9 573 56.5
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 3.1e-172 609.4 468 67.3
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 3.4e-171 605.9 484 63.2
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 5.8e-171 605.1 451 67.8
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 5.8e-171 605.1 451 67.8
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 7.5e-171 604.7 578 56.9
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 4.9e-170 602.1 575 58.1
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 4.9e-170 602.1 575 58.1
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 4.9e-170 602.1 575 58.1
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 4.1e-169 599.0 479 64.9
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.6e-168 597.0 408 72.3
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 2.7e-168 596.3 406 72.7
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 4.6e-168 595.5 557 58.2
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 4.1e-161 572.4 359 77.4
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 8.7e-159 564.7 467 64.5
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 3.6e-157 559.3 583 55.7
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.9e-154 548.9 388 69.8
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.2e-153 545.8 362 72.9
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 7.9e-144 515.0 430 60.9
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.5e-139 500.7 458 56.6
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.9e-137 493.8 423 59.3
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 4.6e-136 489.2 354 65.5
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.1e-128 463.8 377 62.6
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 7.9e-128 461.8 372 61.8
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.5e-121 440.3 300 68.0
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 8.0e-96 355.5 383 49.3
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 4.8e-93 346.3 209 75.6
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.9e-91 339.3 356 56.7
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 8.8e-87 325.5 196 75.5
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 8.3e-77 292.4 179 74.3
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 3.3e-73 280.4 238 61.3
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 1.6e-67 261.5 159 74.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 4.6e-67 260.0 156 76.3
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 4.6e-67 260.0 156 76.3
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 4.0e-63 246.9 359 37.9
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.0e-63 246.9 399 39.6
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.4e-52 211.8 178 64.0
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 2.7e-51 207.6 181 54.1
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.9e-45 187.6 262 37.0
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.9e-45 186.8 127 73.2
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 2.5e-41 174.5 185 50.8
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 9.3e-36 156.0 109 67.9
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.0e-34 152.5 110 65.5
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.5e-30 138.7 130 47.7
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 4.9e-29 133.7 154 47.4
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.1e-28 129.8 88 65.9
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 7.1e-28 129.8 100 64.0
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.0e-26 124.4 126 51.6
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 3.0e-26 124.4 83 66.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 3.3e-25 120.9 83 63.9
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 9.3e-20 102.8 250 38.4
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 2.7e-19 101.3 117 47.0
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 1.6e-16 92.0 96 50.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 9.0e-15 86.3 173 35.3
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 6.5e-13 80.1 88 47.7
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 3.3e-09 67.8 41 75.6
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 2.2e-08 65.1 152 30.9
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 6.3e-08 63.5 59 57.6
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 1.2e-06 59.3 111 36.0
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.2e-06 59.3 36 77.8


User provided reference genes

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