Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004614 Chenopodium quinoa HOM05D017651 ORTHO05D011420 1.8e-268 928.7 483 100.0
AUR62022648 Chenopodium quinoa HOM05D017651 ORTHO05D011420 2.1e-232 808.9 466 90.3
AUR62044752 Chenopodium quinoa HOM05D017651 ORTHO05D011420 1.7e-218 762.7 466 86.7
AUR62022647 Chenopodium quinoa HOM05D017651 ORTHO05D011420 1.5e-209 733.0 466 83.7
EL10Ac1g00124 Beta vulgaris HOM05D017651 ORTHO05D011420 2.1e-152 543.1 472 64.6
Ah.05g178450 Amaranthus hybridus HOM05D017651 ORTHO05D011420 5.7e-129 465.3 469 60.8
Sc23g0001460 Simmondsia chinensis HOM05D017651 ORTHO05D011420 1.3e-40 171.8 407 33.4
TAR381G0253 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.1e-26 125.6 391 29.2
TAR624G0280 Trochodendron aralioides HOM05D003905 ORTHO05D011420 9.0e-26 122.5 398 30.2
Prupe.1G553900 Prunus persica HOM05D003905 ORTHO05D011420 6.5e-24 116.3 354 31.4
RcHm_v2.0_Chr7g0228011 Rosa chinensis HOM05D003905 ORTHO05D011420 3.5e-22 110.5 362 29.8
FvH4_5g32010 Fragaria vesca HOM05D003905 ORTHO05D011420 2.3e-21 107.8 365 30.1
FAN18G0158 Fragaria x ananassa HOM05D003905 ORTHO05D011420 3.0e-21 107.5 360 30.6
FAN08G2565 Fragaria x ananassa HOM05D003905 ORTHO05D011420 5.1e-21 106.7 355 30.7
FAN04G1043 Fragaria x ananassa HOM05D003905 ORTHO05D011420 4.3e-20 103.6 360 30.6
TAR624G1117 Trochodendron aralioides HOM05D003905 ORTHO05D011420 1.6e-19 101.7 366 28.4
Haze_21293 Corylus avellana HOM05D003905 ORTHO05D011420 6.9e-18 96.3 375 28.0
Cfa012940 Carpinus fangiana HOM05D003905 ORTHO05D011420 5.9e-17 93.2 386 27.2
Actinidia01556 Actinidia chinensis HOM05D003905 ORTHO05D011420 3.8e-16 90.5 341 28.2
MBI05_g23390_MAGBIO Magnolia biondii HOM05D003905 ORTHO05D005329 7.2e-15 86.3 374 28.3
Oeu006588.1 Olea europaea HOM05D019587 ORTHO05D011420 2.1e-14 84.7 440 26.6
TAR381G0315 Trochodendron aralioides HOM05D003905 ORTHO05D005329 6.7e-13 79.7 388 28.1
TAR381G1218 Trochodendron aralioides HOM05D003905 ORTHO05D005329 6.7e-13 79.7 388 28.6
ATR0579G136 Amborella trichopoda HOM05D003905 ORTHO05D005329 1.1e-12 79.0 440 28.6
Sed0012955 Sechium edule HOM05D003905 ORTHO05D005329 1.5e-12 78.6 350 26.9
CiPaw.08G067200 Carya illinoinensis HOM05D003905 ORTHO05D005329 5.7e-12 76.6 380 26.3
CiPaw.07G148100 Carya illinoinensis HOM05D003905 ORTHO05D005329 9.7e-12 75.9 378 28.3
Medtr1g025500 Medicago truncatula HOM05D003905 ORTHO05D005329 1.7e-11 75.1 368 26.4
Hma1.2p1_0023F.1_g015570 Hydrangea macrophylla HOM05D003905 ORTHO05D005329 1.8e-10 71.6 341 28.7
Lalb_Chr23g0266101 Lupinus albus HOM05D003905 ORTHO05D005329 1.5e-09 68.6 127 39.4
ClCG05G018200 Citrullus lanatus HOM05D003905 ORTHO05D005329 2.0e-09 68.2 360 24.7
COL.COLO4_26128 Corchorus olitorius HOM05D003905 ORTHO05D005329 2.0e-09 68.2 374 27.3
Lj4C22T7 Lonicera japonica HOM05D003905 ORTHO05D005329 2.0e-09 68.2 213 31.9
unitig_8.g3383 Utricularia gibba HOM05D003905 ORTHO05D005329 2.0e-09 68.2 365 26.8
Ah.11g039850 Amaranthus hybridus HOM05D003905 ORTHO05D005329 3.4e-09 67.4 207 33.3
Ca_13435_v3 Cicer arietinum L. HOM05D003905 ORTHO05D005329 5.9e-09 66.6 367 25.3
Nitab4.5_0005970g0010 Nicotiana tabacum HOM05D003905 ORTHO05D005329 5.9e-09 66.6 272 29.8
TPR.G26376 Trifolium pratense HOM05D003905 ORTHO05D005329 5.9e-09 66.6 448 23.2
VMungo0647G0001 Vigna mungo HOM05D003905 ORTHO05D005329 1.0e-08 65.9 141 36.9
Migut.C00854 Erythranthe guttata HOM05D003905 ORTHO05D005329 1.3e-08 65.5 336 26.2
Lalb_Chr11g0061811 Lupinus albus HOM05D003905 ORTHO05D005329 1.3e-08 65.5 260 28.8
Manes.18G012100 Manihot esculenta HOM05D003905 ORTHO05D005329 5.0e-08 63.5 143 35.0
Cfa013971 Carpinus fangiana HOM05D003905 ORTHO05D005329 6.5e-08 63.2 352 25.6
MELO3C003744.2 Cucumis melo HOM05D003905 ORTHO05D005329 6.5e-08 63.2 366 24.9
Peaxi162Scf00553g00071 Petunia axillaris HOM05D003905 ORTHO05D005329 8.5e-08 62.8 340 26.5
QL02p011991 Quercus lobata HOM05D003905 ORTHO05D005329 8.5e-08 62.8 186 30.1
Thecc.08G046500 Theobroma cacao HOM05D003905 ORTHO05D005329 8.5e-08 62.8 146 36.3
Psat6g002200 Pisum sativum HOM05D003905 ORTHO05D005329 1.1e-07 62.4 436 24.5
Gorai.010G002900 Gossypium raimondii HOM05D003905 ORTHO05D005329 1.4e-07 62.0 149 36.2
TAR376G0902 Trochodendron aralioides HOM05D003905 ORTHO05D005329 1.4e-07 62.0 189 31.2
Atru.chr13.267 Acer truncatum HOM05D003905 ORTHO05D005329 1.9e-07 61.6 358 24.9
DCAR_016728 Daucus carota HOM05D003905 ORTHO05D005329 2.5e-07 61.2 147 34.0
TAR625G1519 Trochodendron aralioides HOM05D003905 ORTHO05D005329 2.5e-07 61.2 197 33.0
Sed0006884 Sechium edule HOM05D003905 ORTHO05D005329 3.2e-07 60.8 367 24.8
Gohir.D05G188500 Gossypium hirsutum HOM05D003905 ORTHO05D005329 4.2e-07 60.5 194 30.4
Gohir.D06G005700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 4.2e-07 60.5 149 36.2
Glyma.06G023600 Glycine max HOM05D003905 ORTHO05D005329 5.5e-07 60.1 159 34.0
Glyma.14G219900 Glycine max HOM05D003905 ORTHO05D005329 5.5e-07 60.1 145 34.5
Potri.002G020000 Populus trichocarpa HOM05D003905 ORTHO05D005329 5.5e-07 60.1 385 23.6
Dinv39531 Davidia involucrata HOM05D003905 ORTHO05D005329 7.2e-07 59.7 453 24.1
Glyma.17G258900 Glycine max HOM05D003905 ORTHO05D005329 7.2e-07 59.7 140 34.3
Gohir.A05G185700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 7.2e-07 59.7 195 31.3
Gorai.009G193800 Gossypium raimondii HOM05D003905 ORTHO05D005329 7.2e-07 59.7 194 31.4
TWI36G1438 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 7.2e-07 59.7 361 25.8
Cpa.g.sc26.312 Carica papaya HOM05D003905 ORTHO05D005329 9.4e-07 59.3 144 33.3
Nitab4.5_0000337g0040 Nicotiana tabacum HOM05D003905 ORTHO05D005329 9.4e-07 59.3 510 23.9
SalBow7G0836 Salvia bowleyana HOM05D003905 ORTHO05D005329 9.4e-07 59.3 363 24.5
AUR62035030 Chenopodium quinoa HOM05D003905 ORTHO05D005329 1.2e-06 58.9 142 33.1
Manes.05G145700 Manihot esculenta HOM05D003905 ORTHO05D005329 1.2e-06 58.9 143 32.9
PSO541G2778 Papaver somniferum HOM05D003905 ORTHO05D005329 1.2e-06 58.9 200 31.5
TWI56G0857 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 1.2e-06 58.9 369 24.7
CSS0039596 Camellia sinensis var. sinensis HOM05D003905 ORTHO05D005329 1.6e-06 58.5 332 27.1
MSTRG.1559 Avicennia marina HOM05D019587 ORTHO05D011420 2.1e-06 58.2 146 33.6
AUR62040550 Chenopodium quinoa HOM05D003905 ORTHO05D005329 2.1e-06 58.2 142 33.1
CsaV3_3G045950 Cucumis sativus L. HOM05D003905 ORTHO05D005329 2.1e-06 58.2 525 21.9
Gohir.A06G002700 Gossypium hirsutum HOM05D003905 ORTHO05D005329 2.1e-06 58.2 149 34.2
Lj5g0002583 Lotus japonicus HOM05D003905 ORTHO05D005329 2.1e-06 58.2 138 34.1
Sc15g0004870 Simmondsia chinensis HOM05D003905 ORTHO05D005329 2.1e-06 58.2 325 28.9
TWI12G0098 Tripterygium wilfordii HOM05D003905 ORTHO05D005329 2.1e-06 58.2 366 24.3
PSO675G3234 Papaver somniferum HOM05D003905 ORTHO05D005329 2.7e-06 57.8 200 31.0
CDE02G0563 Ceratophyllum demersum HOM05D003905 ORTHO05D005329 3.6e-06 57.4 204 28.4
Phvul.001G005400 Phaseolus vulgaris HOM05D003905 ORTHO05D005329 3.6e-06 57.4 138 33.3
EL10Ac1g02168 Beta vulgaris HOM05D003905 ORTHO05D005329 4.7e-06 57.0 378 24.3
CAN.G1925.3 Capsicum annuum HOM05D003905 ORTHO05D005329 4.7e-06 57.0 150 30.7
Dinv31863 Davidia involucrata HOM05D003905 ORTHO05D005329 4.7e-06 57.0 119 37.8
Duzib041G0770 Durio zibethinus HOM05D003905 ORTHO05D005329 4.7e-06 57.0 143 35.7
Duzib093G0852 Durio zibethinus HOM05D003905 ORTHO05D005329 6.1e-06 56.6 173 33.5


User provided reference genes

Program Settings