Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.3e-103 379.8 199 100.0
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 9.8e-35 151.0 193 56.0
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 3.6e-29 132.5 191 48.2
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-28 131.0 213 46.5
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-28 131.0 213 46.5
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 1.3e-26 124.0 196 45.4
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.2e-26 123.2 205 44.9
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 2.2e-26 123.2 189 49.7
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 3.7e-26 122.5 189 43.4
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.4e-25 120.6 199 43.7
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 1.8e-25 120.2 206 43.2
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 7.0e-25 118.2 193 43.5
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 9.2e-25 117.9 205 45.9
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.7e-24 116.3 194 44.3
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 2.7e-24 116.3 187 43.3
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 4.5e-24 115.5 204 43.1
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 4.5e-24 115.5 191 43.5
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 4.5e-24 115.5 191 44.5
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 5.9e-24 115.2 189 48.1
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 7.8e-24 114.8 192 47.9
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 2.3e-23 113.2 187 42.8
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 5.0e-23 112.1 208 43.3
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 6.6e-23 111.7 190 42.1
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 8.6e-23 111.3 190 43.7
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 1.1e-22 110.9 205 42.9
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.9e-22 110.2 194 43.8
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 4.3e-22 109.0 189 41.8
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 7.3e-22 108.2 188 42.6
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 9.5e-22 107.8 199 44.2
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 1.2e-21 107.5 221 37.6
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 1.2e-21 107.5 195 43.6
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.6e-21 107.1 189 42.9
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.6e-21 107.1 208 41.3
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 2.1e-21 106.7 163 50.9
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 2.1e-21 106.7 203 39.4
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 2.1e-21 106.7 186 41.4
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 2.1e-21 106.7 208 40.9
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 2.8e-21 106.3 192 43.8
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 6.1e-21 105.1 188 44.7
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 8.0e-21 104.8 199 43.7
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 8.0e-21 104.8 189 41.8
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.0e-20 104.4 191 41.4
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 1.4e-20 104.0 192 44.8
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 1.8e-20 103.6 206 41.7
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 1.8e-20 103.6 209 40.7
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.3e-20 103.2 192 44.3
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 4.0e-20 102.4 201 40.3
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 4.0e-20 102.4 191 43.5
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 4.0e-20 102.4 207 42.0
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 4.0e-20 102.4 191 41.9
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 5.2e-20 102.1 198 40.4
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 5.2e-20 102.1 209 38.8
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 5.2e-20 102.1 192 41.1
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 8.9e-20 101.3 190 40.0
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 1.2e-19 100.9 187 43.3
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.5e-19 100.5 195 42.1
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 2.0e-19 100.1 203 39.9
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 3.4e-19 99.4 205 40.5
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 4.4e-19 99.0 198 40.9
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.4e-19 99.0 234 35.0
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 9.8e-19 97.8 204 39.2
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 9.8e-19 97.8 189 42.9
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 9.8e-19 97.8 191 44.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.7e-18 97.1 189 40.7
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 1.7e-18 97.1 201 41.3
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 1.7e-18 97.1 183 41.5
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 1.7e-18 97.1 209 39.7
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.7e-18 97.1 200 39.5
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 2.2e-18 96.7 208 39.9
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 2.2e-18 96.7 208 39.9
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 2.2e-18 96.7 189 41.3
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 2.2e-18 96.7 198 38.9
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 2.9e-18 96.3 188 42.0
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.9e-18 96.3 219 38.4
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 3.7e-18 95.9 203 38.9
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 3.7e-18 95.9 203 38.9
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 3.7e-18 95.9 198 40.4
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.4e-18 95.1 180 40.6
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.3e-18 94.7 180 40.6
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 1.1e-17 94.4 208 39.9
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 1.1e-17 94.4 208 39.9
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 2.4e-17 93.2 225 37.3
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 5.4e-17 92.0 99 58.6
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 5.4e-17 92.0 213 39.0
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 5.4e-17 92.0 102 52.9
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 5.4e-17 92.0 193 38.9
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 7.0e-17 91.7 195 38.5
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.2e-16 90.9 191 38.7
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 1.2e-16 90.9 201 39.3
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 2.7e-16 89.7 197 40.6
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 2.7e-16 89.7 186 38.2
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 3.5e-16 89.4 209 39.2
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 3.5e-16 89.4 99 55.6
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 3.5e-16 89.4 99 55.6
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 3.5e-16 89.4 202 38.6
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 4.6e-16 89.0 195 39.5
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 1.3e-15 87.4 99 55.6
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.3e-15 86.7 187 42.2
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 3.0e-15 86.3 179 40.8
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 5.0e-15 85.5 177 39.5
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 6.6e-15 85.1 192 36.5
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 8.6e-15 84.7 96 50.0
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.1e-14 84.3 200 39.0
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.1e-14 84.3 220 36.8
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 1.1e-14 84.3 194 38.1
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 1.5e-14 84.0 114 47.4
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.9e-14 83.6 207 36.2
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.5e-14 83.2 177 36.7
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 2.5e-14 83.2 188 37.8
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 1.2e-13 80.9 200 36.5
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.6e-13 80.5 193 35.2
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 2.8e-13 79.7 200 36.0
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 3.6e-13 79.3 192 38.5
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 4.0e-12 75.9 197 35.0
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.8e-11 72.0 197 34.5
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 1.3e-10 70.9 189 36.5
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 1.3e-10 70.9 217 34.1
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 4.1e-09 65.9 62 56.5
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 5.4e-09 65.5 83 47.0
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 1.3e-07 60.8 140 37.9
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 1.3e-07 60.8 44 63.6
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 3.0e-07 59.7 139 36.7
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 1.1e-06 57.8 100 39.0
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 1.1e-06 57.8 140 35.7
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.9e-06 57.0 155 36.1
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 4.3e-06 55.8 108 39.8


User provided reference genes

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